mRNA_F-serratus_M_contig1199.1520.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1199.1520.1
Unique NamemRNA_F-serratus_M_contig1199.1520.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 2.410e-166
Identity = 252/409 (61.61%), Postives = 299/409 (73.11%), Query Frame = 3
Query:   84 MKVRKSQPLPWLFHRLLLLSACKTIQRTAAFGLDLRVRPVSVTPQHERVAK-SITQMHVVENTGLER-----------PVNRGAAMRNSFLFLVG----VAGAGTVRS---ESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKER-----DGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGESVNPGSAFSLSILAEDVDKIAEDLGGTVGIDSVRGGPRSVSVFDPDGYLIKFVDYGDWLKELPTL 1238
            MK R S      + +LL+LS C  I+   A G  L  RP     Q +  A  S TQ+ + E+   +R           P  RG  +RNS  FL G    +A A T  +    +A AIGDL+EF+DQARFAQHATVQVPDMAAALKFYV GVGMK++RTRAGP FNTTVVGFGPE L+VPP F FGVSS   YGGHFTLELN QKE      DG EDVD +YDPGNGVQ++QIAVD+YRIS ++KAGG+IESGYGYLQV+APGGLRL LLSG RRDPPMFLAVKVKD+ RS++WYTDVAGM + P+P AR  GSPFEPEQP  SVFMAYEGEAFG++L+PA +G+ +NPGS  S+++LAEDV+KIAE LGG V +DS RGG +SV+V DPDGY +KFV+Y DW  +LP L
Sbjct:    1 MKTRSSTCRCVRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRL 409          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA)

HSP 1 Score: 259 bits (663), Expect = 8.470e-80
Identity = 154/302 (50.99%), Postives = 195/302 (64.57%), Query Frame = 3
Query:  360 ESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRA--GPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLEL--NLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLAR-APGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGES--VNPGSAFS-LSILAEDVDKIAEDLGGTVGI---DSVRGGPRSVSVF-DPDGYLIKFVDYGDWLKEL 1229
            E   AIG+L E   Q RF QHA V VPD+ AA++FY +G+GM+++R+RA      NTT V +GPE L VP  +A GVSS  +YGGHF+LEL   L    DG      +YDPGNGVQY+QIAVDTYRIS +I AGG +  GYG        GL++NL SG RRDP MF+A+KV DL +S++WYTDV GM+Q PYP AR A  S FEP+QPK SVFM Y+ +  G+LL+P  + +   +  GSA+S L++LA DV    ED G  VG        G   SV+V  DPDGY    V+Y D+ +EL
Sbjct:   91 EGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDV----EDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.060e-63
Identity = 120/259 (46.33%), Postives = 164/259 (63.32%), Query Frame = 3
Query:  333 VAGAGTVRSESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELN-LQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGES---VNPGSAFS-LSILAEDV 1094
            + GA   R  +A AIG+L E+    RF QH  + VPDMAAAL FY+ G+ M++LR+R     N+T VG+GPETL+ P G+  GVSS   YG HF LELN + K  +G   V    DPGN   Y+Q+AV + R+S + +AGG I+S YG++ V +PGGLR  ++ G RRDP M LA+ V D+ ++  +Y +  GM + PYPL+R P S +EP+QPK S F+A+  + FGILLLP  + E+   V  G     L+IL  DV
Sbjct:   47 ITGAFPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTEEGDTPV---LDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDV 302          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC)

HSP 1 Score: 205 bits (521), Expect = 2.670e-59
Identity = 128/305 (41.97%), Postives = 177/305 (58.03%), Query Frame = 3
Query:  375 IGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQF--NTTVVGFGPETL---QVPPGFAFGVSSMGSYGGHFTLEL-------NLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARA-PGSPFEPEQPKNSVFMAYEGEAFGILLLPA----GRGESVNPGSAFS-LSILAEDVDKIAEDLG-GTVGIDSVRGGPRSVSVF-DPDGYLIKFVDYGDWLKEL 1229
            +G L E ++  R+ QHA V VP M  AL FY +G+GM+++RTR  P    N T VG+GPETL   +V  GF  G+SS   YG HFTLEL        L+ + +  + V   Y+PGNGVQ++QIA+   R+S + + GG I   YG+++V APGGL L ++ GERRDP MF    VKDL+ +  +Y    GM +LPY  AR  P SP EP+QP+ S +M Y  + FG+LL+       +   +  GS F  L+IL+ +V +    L  G  G   V G   +V+ F D  GY +  V+Y D+ KEL
Sbjct:    1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTG--PVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA)

HSP 1 Score: 200 bits (508), Expect = 5.990e-58
Identity = 109/258 (42.25%), Postives = 153/258 (59.30%), Query Frame = 3
Query:  357 SESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLEL-----NLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGESVNPGSAFS-LSILAEDVDKIAED 1112
            S+   +IG+L EF D A+F QH  V+V DM AAL+F ++G+ M +LRTR     N T VG+GPE L  P  F  GVSS   YGGHF+LEL      L++ +    +      PG  +QY+Q+A        +IKAGG+I  GYGY  V+AP GL   +   + RDP  ++A+KVKD+ +SI +Y  V GM +L Y + R   S FEP QPK SV M Y   +  ILL+PA R +++  G+ F+ L+I+   V+ I ++
Sbjct:   26 SQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPLEQRKPFANN------PGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGKE 277          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A7S3K077_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K077_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.340e-29
Identity = 79/222 (35.59%), Postives = 121/222 (54.50%), Query Frame = 3
Query:  414 AQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGER-RDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPG---SPFEPEQPKNSVFMAYEGEAFGILLLPAGRGESVNPGSAF 1067
            A+   ++VP++A    F+ + +GM+    R G Q    +  FGP +L+ PP F  G+S+    GGHF + L    E    +           + Y+Q A+   R S II  GG+I   YG + V+APG +   LL G+  RD  MFL+++V DL+ S+ +Y ++ G ++ PYP AR P    SPF+P  P+NSV++    ++FGILL+P      +  GSAF
Sbjct:   67 ARELRIRVPNVAVTGDFFEKALGMQ----RVGTQ----LFAFGPTSLERPPSFFPGISTFDQDGGHFAIRLEEGAESTFAQ----------SISYIQFALPNLRASKIISYGGIINEAYGVVDVLAPGNVPCRLLLGDEVRDRTMFLSLRVTDLSASLSFYQNL-GFHKAPYPRARPPTNEESPFDPNPPRNSVYLTPCDDSFGILLVPTPTPFRLALGSAF 269          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 1.270e-24
Identity = 91/285 (31.93%), Postives = 135/285 (47.37%), Query Frame = 3
Query:  411 FAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLEL--NLQKERDGGEDVDVYYDPGNGVQYMQIAV-DTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEG--EAFGILLLPAGRGESVNPGSAFSLSILAEDVDKIAEDLGGTVGIDSVRG-----GPRSVSVFDP-DGYLIKFVDYGDWLKELP 1232
            F QHA ++V D+  ++KF+ QG+GMK+ RTR    F    V FGPETL    G            G F LEL  N    +D            N  Q+ Q A+ ++ R++ +  +GG I  G+GY ++ AP G ++ +    RRDP   + V V D+  + K+Y  V GM        +  G  FEP + K SV M Y    E  GILL+P    +  +   +  +++L +DV++  E L          G     G   VS+  P +G  + FVDY D+ +E P
Sbjct:  154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRGNQAF----VSFGPETLTAADG------------GKFALELVENPSTTQD------------NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQP 409          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A2P6THP5_CHLSO (Lactoylglutathione lyase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THP5_CHLSO)

HSP 1 Score: 96.3 bits (238), Expect = 6.890e-19
Identity = 96/294 (32.65%), Postives = 135/294 (45.92%), Query Frame = 3
Query:  420 HATVQVPDMAAALKFYVQGVGMKILRTRAGPQ--FNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPGNGVQYMQIAV-DTYRISSIIK-AGGVIESGYGYLQ----VVA----PGGLRLNLLS--GERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAY---EGEAFGILLLPAGRGESVNPGSAFS-LSILAEDVDKIAEDL---GGTVGIDS--VRG-GPRSVSVFDPDGYLIKFVDYGDWLKEL 1229
            HA  +V DM   +K+Y    GMK+LR R  P+  ++   +G+GPE                    HF +EL      D        YD G G  +  IA  D Y++ S +K AGG +    G ++    V+A    P G +  L+   GE  +P   + ++V DL RSIK+YT+V GM  L         +   PE      F+ Y   E      L    GR E+   G+A++ ++I  +DV K AE     GG V  +   V G G +  +V DPDGY I FVD  D+LKEL
Sbjct:   18 HAVYRVGDMDKTIKYYQDCFGMKLLRYRDIPEGKYSNAFLGYGPEET------------------HFAMELTYNYGVDS-------YDLGEGFGHFGIAAPDVYKLESAVKTAGGNVSRAAGPVKGGKTVIAFVDDPTGYKFELIQREGEIPEPLAQVMLRVGDLDRSIKFYTEVMGMKLL--------RTRDNPEYKYTLAFLGYGPEESSTVFELTYNYGR-ETYEKGNAYAQVAISTQDVYKTAEAAKAAGGNVVREPGPVPGIGTKITAVLDPDGYKIVFVDNEDFLKEL 277          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT)

HSP 1 Score: 97.4 bits (241), Expect = 1.410e-18
Identity = 63/182 (34.62%), Postives = 96/182 (52.75%), Query Frame = 3
Query:  429 VQVPDMAAALKFYVQGVGMKILRT-RAGPQ-FNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDP-----GNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSP 953
            V+VPD+AAA +F++ G+ M  LR+ R GP      VVG+G E L    G            G F+LEL +Q          +  D         + Y+Q+ V   RIS ++++GG IES YGY++V +PGGL + +++  RRDP  F+A++V D+  +  +Y    GM ++P P  R    P
Sbjct:  131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDDG------------GKFSLEL-VQASARAPAPARLALDAPDAEAAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299          
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A2P6VRQ2_9CHLO (Lactoylglutathione lyase n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRQ2_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 7.200e-16
Identity = 88/293 (30.03%), Postives = 136/293 (46.42%), Query Frame = 3
Query:  420 HATVQVPDMAAALKFYVQGVGMKILRTR--AGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPGNGVQYMQIAV-DTYRISSIIKAGG--------VIESGYGYLQVVA-PGGLRLNLLS--GERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILL-LPAGRG-ESVNPGSAFS-LSILAEDVDKIAEDL---GGTVGIDS--VRG-GPRSVSVFDPDGYLIKFVDYGDWLKEL 1229
            HA  +V DM   +++Y +  GM++LR R  +  +++   +G+GPET                   HF +EL      D        YD G G  +  IA  D Y++   +KA G         ++ G  ++  V  P G +  L+   G+  +P   + ++V DL RSIK+YT+V GM  +         +   PE      F+ Y  E    +  L    G ES + G+A++ ++I  +DV K A+ +   GG V  D+  V G G +  +  DPDGY I FVD  D+LKEL
Sbjct:  785 HAVYRVGDMDKTIQYYKECFGMQLLRYRDISEEKYSNAFLGYGPETT------------------HFAMELTYNYGVDS-------YDLGEGFGHFGIATADVYKMVEAVKAKGGKVSREPGPVKGGKTHIAFVEDPTGYKFELIQREGDIPEPLAQVMLRVGDLDRSIKFYTEVLGMKLI--------RTRENPEYKYTLAFLGYGPEESNCVFELTYNWGKESYSKGNAYAQVAISTKDVYKTAQHIKAAGGNVTRDAGPVPGIGTKITACLDPDGYKIVFVDNEDFLKEL 1044          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LU98_ECTSI2.410e-16661.61VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YIX3_9STRA8.470e-8050.99VOC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D405_9STRA4.060e-6346.33Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A0G4EHT2_VITBC2.670e-5941.97VOC domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S2UZ58_9STRA5.990e-5842.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3K077_9STRA1.340e-2935.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5B8MYG2_9CHLO1.270e-2431.93Putative glyoxalase n=3 Tax=Chloropicon primus Tax... [more]
A0A2P6THP5_CHLSO6.890e-1932.65Lactoylglutathione lyase n=1 Tax=Chlorella sorokin... [more]
A0A8J5XKT4_DIALT1.410e-1834.62Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A2P6VRQ2_9CHLO7.200e-1630.03Lactoylglutathione lyase n=2 Tax=Micractinium cond... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1199contigF-serratus_M_contig1199:132724..137222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score485.0
Seed ortholog evalue3.4e-134
Seed eggNOG ortholog2880.D8LU98
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.methylglyoxal metabolic process
EggNOG OGsCOG0346@1,KOG2943@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1241
Cds size1158
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1199.1520.1prot_F-serratus_M_contig1199.1520.1Fucus serratus malepolypeptideF-serratus_M_contig1199 132724..135614 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929099.97645-CDS-F-serratus_M_contig1199:132723..1337811622929099.97645-CDS-F-serratus_M_contig1199:132723..133781Fucus serratus maleCDSF-serratus_M_contig1199 132724..133781 -
1690962704.4798956-CDS-F-serratus_M_contig1199:132723..1337811690962704.4798956-CDS-F-serratus_M_contig1199:132723..133781Fucus serratus maleCDSF-serratus_M_contig1199 132724..133781 -
1622929099.9939058-CDS-F-serratus_M_contig1199:135514..1356141622929099.9939058-CDS-F-serratus_M_contig1199:135514..135614Fucus serratus maleCDSF-serratus_M_contig1199 135515..135614 -
1690962704.49303-CDS-F-serratus_M_contig1199:135514..1356141690962704.49303-CDS-F-serratus_M_contig1199:135514..135614Fucus serratus maleCDSF-serratus_M_contig1199 135515..135614 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929100.0138247-UTR-F-serratus_M_contig1199:135614..1356241622929100.0138247-UTR-F-serratus_M_contig1199:135614..135624Fucus serratus maleUTRF-serratus_M_contig1199 135615..135624 -
1690962704.50108-UTR-F-serratus_M_contig1199:135614..1356241690962704.50108-UTR-F-serratus_M_contig1199:135614..135624Fucus serratus maleUTRF-serratus_M_contig1199 135615..135624 -
1622929100.0309079-UTR-F-serratus_M_contig1199:137149..1372221622929100.0309079-UTR-F-serratus_M_contig1199:137149..137222Fucus serratus maleUTRF-serratus_M_contig1199 137150..137222 -
1690962704.5087247-UTR-F-serratus_M_contig1199:137149..1372221690962704.5087247-UTR-F-serratus_M_contig1199:137149..137222Fucus serratus maleUTRF-serratus_M_contig1199 137150..137222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1199.1520.1

>prot_F-serratus_M_contig1199.1520.1 ID=prot_F-serratus_M_contig1199.1520.1|Name=mRNA_F-serratus_M_contig1199.1520.1|organism=Fucus serratus male|type=polypeptide|length=386bp
MKVRKSQPLPWLFHRLLLLSACKTIQRTAAFGLDLRVRPVSVTPQHERVA
KSITQMHVVENTGLERPVNRGAAMRNSFLFLVGVAGAGTVRSESATAIGD
LFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVV
GFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPG
NGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERR
DPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSV
FMAYEGEAFGILLLPAGRGESVNPGSAFSLSILAEDVDKIAEDLGGTVGI
DSVRGGPRSVSVFDPDGYLIKFVDYGDWLKELPTL*
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mRNA from alignment at F-serratus_M_contig1199:132724..137222-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1199.1520.1 ID=mRNA_F-serratus_M_contig1199.1520.1|Name=mRNA_F-serratus_M_contig1199.1520.1|organism=Fucus serratus male|type=mRNA|length=4499bp|location=Sequence derived from alignment at F-serratus_M_contig1199:132724..137222- (Fucus serratus male)
TTTAAGAAAAATCTGAACGCACACTAGACCTTCCGAGCATCCCACACACG GGGGAAAATGTCAAAACGCTTAGGTGACTGTATCTAACCACACTTACAGA TTACCTAGACTAGGCAGCGTGCGGTTTACCACCATGCAGGTTAGGTCATT TGTAGTAACGTCGGTGGTATTTTGCAGATGACCTCGACTAATAGGCAGTA TACGGTGTACCGCTATTCAGGCTAGGCCATTGATCTACTGTTTGTATAGA TATTGGTACTAATAGTGGTGAGTCATACGACTTCCGCAGACACGCACATC GATCTTACTGCAGTAAGGGGCGTTTTAAACATGCTTTTTTGCACTTTTTT GGTGCCCTTACGTGATTGGTCCAAGATGCGTTGAACCGACCTACGTCTCC CAGCATATCTGTACGCTACGCATCCCCACATGTCCCTGGTCCATGTGCGT TGAGCCGGATCCACAGATATGACCTACGTACATCCAAACATTAATATGCC TGTACGCACAACATACATTCAACAAGCTAGCTGAGTCAAGTCAGTGCGTG GTAAAATATTTGAGCTTCTTGTACGGTATCAAATACAACAAGCTACAGTG CTTATCACGAGACGGACAGTGGGCAACGTGGTGCAGAGTGTACTCTTCGC TGGTGTAAATCGAGATGGCCATGTCCAGGCTCATCCTTTTGCTTTACGCG TCGCAAACGCTTTCATGCTTGATCAAATATTTTCCTCGCCTCTCGTGTTG CTACTACTGTTGTATACGGTACTGCTGTATGGCGTACGGGGATGTATGTA TGTATGTATGGTCATCACATATAGCAGAGTATGGATCAACCGGGTAAGGT TGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATAATACTCCCCCTG TCCCCGTGCGTGCCTGAGGATTTGGTCTCGCGAGACGGGTTCAGCCGTCC TGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTT ACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTATGAAACCGC CATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCAGTTGCGTAC CGATGGCGTTCACTGCCTAAAGTTCGCTGGCACAGGGCCAGTAAACCTCA AGGTACTTCCGAACGGGTGCTGCCTTGGCAGGTCACCATGGACCAATTAA TCTGCGCCTCTCTTTCCCACCCCCACTATTGGTATGAAGTGGGCATGTTG AAAGTACCGTGTACAGACGGAGCAACAAATCTAAAAAAATACTTCGTATG TCTTAGAGTGTAACAAATATGACACGCACGTCTGGGATGATTAAAATGGT CCAAAGACGTGTCTCTTTTTGTGACACTTATTGTGTCACAATAAGAGACA AAAAAAATCATGTTTAAAACGCCCCTAAGCAATGGAAGGGGCGTCCTTCG TATAGCGCTGGCTAGAATGGCGGTACCAGTAGAGAATGAGACAAGAAACG CCACCGATTCAGCTTTCGAGTCGTCATCATCGGTGGGTAAAAGCTTTGAC TGGCCGTTTCGCTTCGTGTCGTTCGATTCTCTCTGTCTGTTGTCACAGAA TCCGACTCATGAAAGTCCGCAAGAGCCAACCGTTGCCATGGTTGTTTCAC CGCCTGCTCCTACTGTCTGCGTGCAAAACCATCCAAAGGACGGCAGCCTT TGGACTGGGTAAGTAGGGCTGGATGAAGCACTGTCAGAGCGGGCGTTGGC GTCGGACTCTATAAAGCATATTCTTCTTCAGGATACTACGGTTTTTGATC GATGACTATGCGTCCCCAAAGAGACCATAGGCGGGAGTGGGAATGGTAAC CGAGCAAGTTGATTCCCATCGGCAGAAAGTGATATACTGTGTACTACCTA AAAGACAAACAAAACCAATTTTGTCCCTGCAGCCGCAGTGTTCCCACCTA TAAACTATACTGGTACACCTTTTGACTGATTGGAAGGTTTAGATGCATTC AGATTTTTTTTGAGAGCATGCATAGTGTGTTTGTGGTCACACCTATAGCA AGAATATGGATCAACCTGGTAAGGTTGCCAACCCTGCTCGTGGTCAGCTG AACAGGGAAAATAATATTCCCCTGTCCGCGTTCGTGCCTGATAAATTTGG TCTCGCGAGACATTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTC CATACTCAAGCTGAATCTGGTGCTTACTTACGGGATCCCCCCCGAGTTCC GCGGCGGCGTCCATATATTTATATTAAACCGCCATACGCCATCGGGTAAG TCCTGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCG AGAGTCCACCGGCACAGGGCCAGTAAATCTCGAGGTAGTTCCTAACGAGT GCTGCCTTAGCAGGTCACCATGGATTAATATTCGCCTCTCTTTCCGACAC CCACTATTGGTATGAAGTGGGCACGTTGAAAGTAACGTGTATGCATCATC AGCACTTTCGCCAAAGTATAGTATAGGTCAACCGATATGGTTGCCAATCC TGCTCGTGGCCAGCTGAACAGGAAAAATGACGTTTTCCTGTCTCTGTTCG CGCCTGCGAATTTGGTCTCGCGATGCGGGAACGACCGTCCCGTCCCGCGT CAGCCCGCTCATTCTCCACACTCACGCTGAATTTGGTGCTTACTGATTGT TTTTTTCTGCTTCACGCGACGGCGTCCATGTTTACCGTCAGCAGCCATCG GGTCAGTCCCGAGTTTTCCGGTCACGCATTTGCGGTCCGATGGCGTTCAC TGTCGAGAGTCCGCCGGCACAAGGCCAGTAGTCCTCAAGGTATTTCGAGT AAGGGGCAATGGACGAAATCGGGTATGCCCGGGTATTTCTTGGACAAAAT TGGGCACAGGTGTTTTCACGTGCGGGAATGTTCTGCTACGCCCGGGCTCA ACCAGCGCTTTTTTGTTTAGTTGTTTTGCTCTGCACCGTGCGATTCGCCC TTACTAGTCTTAAATAGTCTGATACACCTTACCATTTTTTTTCGTTCTTT TTACACATGAAGGCCGGTTGAACGGGAGTGCTTCAAAAGAGGGATCAACA GTATGACCGATTTTGGCAACTAAACACCCGGGTATGCCCAGTTACATCTA CTAAGCCGCTGATTTTTCTGGTAAAAGCCTCCCCCGAATCTTCCGCACGT GAAAACACCTATGCACGATTTTGTCCGAGAAACACCCGGACACACCCGAT TTTGTCCATTGCTATTCGAGTATTGGTTGCTGCCTTTTCAGGTATCACCG TGGACCACTTTTTGTGCGCCTCGCTTTTCCCGCACCGTATTTAATTAATA TTTATATTAATATAGTTGCAGCATCACTTTTACGCGGTAGTGACATAACA CGGCAATACGCGCTACAATATTACGCGTCTTCCGCTGCCAGATTTGCGGG TGCGACCTGTCTCCGTGACGCCACAACATGAACGAGTCGCGAAATCTATA ACCCAGATGCACGTGGTGGAGAACACCGGTTTAGAAAGGCCCGTGAACAG GGGAGCTGCCATGCGCAACTCTTTCCTGTTCCTCGTGGGGGTTGCCGGGG CAGGTACGGTACGCTCGGAGTCTGCGACGGCTATAGGAGACCTGTTCGAG TTTAGGGACCAAGCGCGGTTCGCCCAGCACGCCACGGTGCAGGTGCCGGA TATGGCCGCAGCGCTCAAGTTTTACGTCCAAGGCGTTGGGATGAAAATTC TCCGAACGCGAGCAGGGCCTCAGTTCAATACGACTGTCGTCGGGTTTGGG CCTGAGACGCTTCAAGTCCCGCCGGGCTTTGCCTTTGGCGTCAGTTCGAT GGGTTCTTACGGCGGTCACTTTACCCTGGAGCTCAACTTACAGAAAGAAC GGGACGGCGGAGAGGACGTGGACGTCTACTACGACCCGGGTAACGGCGTC CAGTATATGCAGATTGCCGTCGACACGTACCGTATTTCATCTATCATCAA AGCGGGAGGTGTCATCGAGTCCGGCTACGGGTATCTCCAGGTTGTTGCGC CAGGCGGTCTGCGCCTGAACCTGTTGAGCGGCGAACGCAGAGATCCGCCG ATGTTTCTCGCTGTCAAAGTCAAGGACCTCACGAGGTCCATCAAATGGTA CACAGACGTCGCAGGTATGAATCAGTTGCCGTACCCACTGGCTAGAGCGC CGGGCTCGCCTTTTGAACCTGAACAACCTAAGAATAGTGTCTTCATGGCT TACGAGGGAGAAGCATTCGGTATTTTGCTCCTACCTGCCGGGCGCGGCGA GTCCGTGAATCCCGGGAGCGCATTTTCTCTTTCGATCTTAGCAGAAGATG TTGACAAGATTGCCGAGGACCTTGGAGGCACGGTGGGCATAGATAGTGTT AGGGGAGGGCCGCGGTCTGTTTCGGTGTTCGATCCCGATGGTTACCTTAT TAAATTCGTCGATTACGGCGACTGGCTGAAGGAGCTCCCGACCTTGTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1199:132724..137222-

>mRNA_F-serratus_M_contig1199.1520.1 ID=mRNA_F-serratus_M_contig1199.1520.1|Name=mRNA_F-serratus_M_contig1199.1520.1|organism=Fucus serratus male|type=CDS|length=2316bp|location=Sequence derived from alignment at F-serratus_M_contig1199:132724..137222- (Fucus serratus male)
ATGAAAGTCCGCAAGAGCCAACCGTTGCCATGGTTGTTTCACCGCCTGCT
CCTACTGTCTGCGTGCAAAACCATCCAAAGGACGGCAGCCTTTGGACTGG
ATGAAAGTCCGCAAGAGCCAACCGTTGCCATGGTTGTTTCACCGCCTGCT
CCTACTGTCTGCGTGCAAAACCATCCAAAGGACGGCAGCCTTTGGACTGG
ATTTGCGGGTGCGACCTGTCTCCGTGACGCCACAACATGAACGAGTCGCG
AAATCTATAACCCAGATGCACGTGGTGGAGAACACCGGTTTAGAAAGGCC
CGTGAACAGGGGAGCTGCCATGCGCAACTCTTTCCTGTTCCTCGTGGGGG
TTGCCGGGGCAGGTACGGTACGCTCGGAGTCTGCGACGGCTATAGGAGAC
CTGTTCGAGTTTAGGGACCAAGCGCGGTTCGCCCAGCACGCCACGGTGCA
GGTGCCGGATATGGCCGCAGCGCTCAAGTTTTACGTCCAAGGCGTTGGGA
TGAAAATTCTCCGAACGCGAGCAGGGCCTCAGTTCAATACGACTGTCGTC
GGGTTTGGGCCTGAGACGCTTCAAGTCCCGCCGGGCTTTGCCTTTGGCGT
CAGTTCGATGGGTTCTTACGGCGGTCACTTTACCCTGGAGCTCAACTTAC
AGAAAGAACGGGACGGCGGAGAGGACGTGGACGTCTACTACGACCCGGGT
AACGGCGTCCAGTATATGCAGATTGCCGTCGACACGTACCGTATTTCATC
TATCATCAAAGCGGGAGGTGTCATCGAGTCCGGCTACGGGTATCTCCAGG
TTGTTGCGCCAGGCGGTCTGCGCCTGAACCTGTTGAGCGGCGAACGCAGA
GATCCGCCGATGTTTCTCGCTGTCAAAGTCAAGGACCTCACGAGGTCCAT
CAAATGGTACACAGACGTCGCAGGTATGAATCAGTTGCCGTACCCACTGG
CTAGAGCGCCGGGCTCGCCTTTTGAACCTGAACAACCTAAGAATAGTGTC
TTCATGGCTTACGAGGGAGAAGCATTCGGTATTTTGCTCCTACCTGCCGG
GCGCGGCGAGTCCGTGAATCCCGGGAGCGCATTTTCTCTTTCGATCTTAG
CAGAAGATGTTGACAAGATTGCCGAGGACCTTGGAGGCACGGTGGGCATA
GATAGTGTTAGGGGAGGGCCGCGGTCTGTTTCGGTGTTCGATCCCGATGG
TTACCTTATTAAATTCGTCGATTACGGCGACTGGCTGAAGGAGCTCCCGA
CCTTGTAGATTTGCGGGTGCGACCTGTCTCCGTGACGCCACAACATGAAC
GAGTCGCGAAATCTATAACCCAGATGCACGTGGTGGAGAACACCGGTTTA
GAAAGGCCCGTGAACAGGGGAGCTGCCATGCGCAACTCTTTCCTGTTCCT
CGTGGGGGTTGCCGGGGCAGGTACGGTACGCTCGGAGTCTGCGACGGCTA
TAGGAGACCTGTTCGAGTTTAGGGACCAAGCGCGGTTCGCCCAGCACGCC
ACGGTGCAGGTGCCGGATATGGCCGCAGCGCTCAAGTTTTACGTCCAAGG
CGTTGGGATGAAAATTCTCCGAACGCGAGCAGGGCCTCAGTTCAATACGA
CTGTCGTCGGGTTTGGGCCTGAGACGCTTCAAGTCCCGCCGGGCTTTGCC
TTTGGCGTCAGTTCGATGGGTTCTTACGGCGGTCACTTTACCCTGGAGCT
CAACTTACAGAAAGAACGGGACGGCGGAGAGGACGTGGACGTCTACTACG
ACCCGGGTAACGGCGTCCAGTATATGCAGATTGCCGTCGACACGTACCGT
ATTTCATCTATCATCAAAGCGGGAGGTGTCATCGAGTCCGGCTACGGGTA
TCTCCAGGTTGTTGCGCCAGGCGGTCTGCGCCTGAACCTGTTGAGCGGCG
AACGCAGAGATCCGCCGATGTTTCTCGCTGTCAAAGTCAAGGACCTCACG
AGGTCCATCAAATGGTACACAGACGTCGCAGGTATGAATCAGTTGCCGTA
CCCACTGGCTAGAGCGCCGGGCTCGCCTTTTGAACCTGAACAACCTAAGA
ATAGTGTCTTCATGGCTTACGAGGGAGAAGCATTCGGTATTTTGCTCCTA
CCTGCCGGGCGCGGCGAGTCCGTGAATCCCGGGAGCGCATTTTCTCTTTC
GATCTTAGCAGAAGATGTTGACAAGATTGCCGAGGACCTTGGAGGCACGG
TGGGCATAGATAGTGTTAGGGGAGGGCCGCGGTCTGTTTCGGTGTTCGAT
CCCGATGGTTACCTTATTAAATTCGTCGATTACGGCGACTGGCTGAAGGA
GCTCCCGACCTTGTAG
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