prot_F-serratus_M_contig1195.1495.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1195.1495.1
Unique Nameprot_F-serratus_M_contig1195.1495.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length130
Homology
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BLAST of mRNA_F-serratus_M_contig1195.1495.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 9.400e-58
Identity = 98/128 (76.56%), Postives = 114/128 (89.06%), Query Frame = 0 
Query:    1 MDMAAEGRVVMLNGLVKQGVSLSFVDASSPYYTPLIAASGNGRDEAVRIILQCPGVQVNRRNPKGETALMHAAASHSLRIVRMLTQAGANPLARDRRNRSAEHWAYKRGHLHMILVKVVVWLTPPQKS 128
            M++A+EGR+V+LNGLVKQ VSL++VD S+PY TPLIAAS NGRDE VRIILQCPGVQVNR N KGETALMH AAS S++IVRML + GANP ARDRRNR+AEHWAYK+GH+HMILVKVV+WL+PP K 
Sbjct: 1982 MEIASEGRLVLLNGLVKQDVSLNYVDPSNPYLTPLIAASANGRDECVRIILQCPGVQVNRANSKGETALMHGAASGSVKIVRMLMKHGANPSARDRRNRTAEHWAYKQGHMHMILVKVVMWLSPPIKQ 2109
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BLAST of mRNA_F-serratus_M_contig1195.1495.1 vs. uniprot
Match: A0A6V1W0T1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W0T1_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 2.340e-22
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0 
Query:    4 AAEGRVVMLNGLVKQGVSLSFVDASSP--YYTPLIAASGNGRDEAVRIILQCPGVQVNRRNPKGETALMHAAASHSLRIVRMLTQAGANPLARDRRNRSAEHWAYKRGHLHMILVKVV 119
            AA GR+ ++  LV QG     +  + P    T LIAA+  GR   VR +L  PG+QVN+ N  GETALMHAAA   L + ++L Q GA+P   D +  +AEHWA K+G+++M+  K++
Sbjct:    7 AAAGRLALVRALVAQGADPDALHPAEPRGLQTALIAAARRGRRAVVRYLLGLPGLQVNKVNAAGETALMHAAAYGGLEMAKLLMQNGADPRIIDLKGSTAEHWAVKKGYINMLQYKLI 124
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BLAST of mRNA_F-serratus_M_contig1195.1495.1 vs. uniprot
Match: F0Y064_AURAN (VPS9 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y064_AURAN)

HSP 1 Score: 53.9 bits (128), Expect = 9.180e-6
Identity = 37/122 (30.33%), Postives = 61/122 (50.00%), Query Frame = 0 
Query:    2 DMAAEGRVVMLNGLVKQGVSLSFVDASSPYYTPLIAASGNGRDEAVRIILQCPGVQVNRRNPKGETALMHAAASHSLRIVRMLTQAGANPLARDRRNRSAEHWAYKRGHLHMILVKVVVWLT 123
            D+A EGR++                 ++    PL+ A+ + + +AV ++L    V+V+  N   ET LMHAA + +L I   L   GA+P A+D   R+A  WA  + + +M+L   V  L+
Sbjct: 1469 DVATEGRLLXXXXXXXXXXXXXXXXDAARGDAPLLLAAKHRKLKAVELLLAKDKVKVDCPNANRETPLMHAAKAGALDICSRLLAKGADPNAKDADGRTATSWASSKSYANMMLYMGVAALS 1590
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BLAST of mRNA_F-serratus_M_contig1195.1495.1 vs. uniprot
Match: A0A553N9Q6_TIGCA (RING-type E3 ubiquitin transferase n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N9Q6_TIGCA)

HSP 1 Score: 51.2 bits (121), Expect = 7.470e-5
Identity = 29/83 (34.94%), Postives = 50/83 (60.24%), Query Frame = 0 
Query:   32 YTPLIAASGNGRDEAVRIILQCPGVQVNRRNPKGETALMHAAASHSLRIVRMLTQAGANPLARDRRNRSAEHWAYKRGHLHMI 114
            +T L AAS NG  E +RI+++    ++   +  G+ A+ HAA      I+ +LT AGA+  AR++R ++A H A  +GH+ ++
Sbjct:  561 HTALQAASQNGHAEVIRILIRHKA-ELEIEDKDGDRAVHHAAFGDEATIMELLTHAGADLNARNKRRQTALHIAVNKGHVGVV 642
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1195.1495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KV84_9PHAE9.400e-5876.56VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6V1W0T1_HETAK2.340e-2243.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y064_AURAN9.180e-630.33VPS9 domain-containing protein n=1 Tax=Aureococcus... [more]
A0A553N9Q6_TIGCA7.470e-534.94RING-type E3 ubiquitin transferase n=1 Tax=Tigriop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 30..60
e-value: 510.0
score: 7.2
coord: 64..93
e-value: 0.0094
score: 25.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 64..96
score: 10.659
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..122
e-value: 7.3E-24
score: 86.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..115
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 12..95
e-value: 5.0E-10
score: 39.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..120
score: 19.916
NoneNo IPR availablePANTHERPTHR24124FAMILY NOT NAMEDcoord: 32..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1195contigF-serratus_M_contig1195:285372..287168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1195.1495.1mRNA_F-serratus_M_contig1195.1495.1Fucus serratus malemRNAF-serratus_M_contig1195 283894..287168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1195.1495.1 ID=prot_F-serratus_M_contig1195.1495.1|Name=mRNA_F-serratus_M_contig1195.1495.1|organism=Fucus serratus male|type=polypeptide|length=130bp
MDMAAEGRVVMLNGLVKQGVSLSFVDASSPYYTPLIAASGNGRDEAVRII
LQCPGVQVNRRNPKGETALMHAAASHSLRIVRMLTQAGANPLARDRRNRS
AEHWAYKRGHLHMILVKVVVWLTPPQKSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom