mRNA_F-serratus_M_contig1190.1476.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_F-serratus_M_contig1190.1476.1
Unique Name	mRNA_F-serratus_M_contig1190.1476.1
Type	mRNA
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))

Homology

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 798 bits (2060), Expect = 9.260e-270
Identity = 502/1180 (42.54%), Postives = 633/1180 (53.64%), Query Frame = 3

Query:   15 VNTPSRPEFRIGTPLAAAALNPGPLKHGKEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADM---GVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATPIRA-APAE----------------------PPRDIYVP-------------------------------------MPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------IPLRVSRELE-----------------HEGY----------------------VEMPGRTRGEIRAFRDASRD-----------YAHRHGVPL--DHVAMVS--------------------------------------------------MLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDL-EDVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIHRRFLMNL 2969
            V  P +  F +G P              K +D+N LHVS +HA+  +L+  AKQHG+RLT  L  C  C +AK  +A  PH   +RA  P  L HID  GP   SLGGS +++MFVDS SR  + YG+R KS    L+ VK+ +ADM   GVPR+FR DNG E     F+ FC+  GIRR +TAP TPQQNGP ES I R  KAG+AARL   +L+P I    + G     G  LWLES  WA+  +NR+ T  N  + SPHE+  G  P L ++PFLQP Y R  R RK DP+A LC ++N G NH     ++L   TGRV  + +V W     PL+  P+   APA+                      PP     P                                      P + P+AA XXXXXXXXXXXXXXXXXXXXXX                                   +  R  REL+                  +G                         +PGR RG    F+D   +            AHR G+    D   ++S                                                  +LA  E  +  +R     + +PDLP  +ASDL  P    +   + HAD+W HS+ +EF GL++A                                                    GET+APTV+ S VRLL+A+ACE +L L HFD+ QAFVQSDL EDVF RLP+GCG LSG +V+LNK LYGLKQ SR W++HL  CL  LGF QCM D CV RLIE+GR+ +T VVHVD IF++G++ERCD+   DLN  +PVKNLG+L+WY GC Y RD   GTL ISQQ++AEEL  +F V   + +PL VG+KL EFD+DEE   WPFREL+G LMWLA  TRPDI+NAVR+VARYC++PK IHW++ + IL Y+  T   GIT++R +  G+S+EVF DADYASKA DRR VSGG +MC G C+ WFSRTQKCVTLST+EAEYV+L D +KE+LFLRQVWRFM+P  GMPC PVFEDNQGA+QL++NP+SNSNSKHIDVRHHF+RELV +  I + HV S YQH + LTK L    F  HR ++M++
Sbjct:   19 VMAPGKRPFSVGKPT-------------KIIDVNLLHVSSSHANEFLLRELAKQHGLRLTGVLQPCGGCLQAKGKKAGVPHQSGTRAERPHDLWHIDLCGPMTASLGGSFFMIMFVDSFSRWMKLYGMRRKSDT--LAFVKKLLADMSGTGVPRSFRMDNGGEFIGRDFIAFCDNAGIRRTYTAPGTPQQNGPAESAIWRVNKAGHAARLEAPRLFPKIDFTRVPGF-GRDGERLWLESCHWAAGGFNRSPTKANVGYKSPHELFTGRPPPLQIVPFLQPGYMRVTRARKMDPQAVLCCYLNNGDNHHESAVKVLKFATGRVCMTNNVVWVSDRAPLLTPPLELPAPADEGGDSNVAAAPFLIEYISPPLLPPSPYARPPTSPAAILSQAXXXXXXXXXXXXXXXXXXXXXPFTTTAPPATPLAAAXXXXXXXXXXXXXXXXXXXXXXASPPASXXXXXXXXXXXXXXXXXXXXXXXXTNMPPLTTRTIRELDVGRGDMRVSGRTRAAAKDQGXXXXXXXXXXXXXXXXXXXXXXETRVPGRLRGRRVRFQDGGAERSTSPGGSGDALAHRFGLVSLQDKATLLSTLTTRSIVDGGRKEIPSSAGGRDGAEPGGREREGTKTEGLREEVPFACATLLASREDIDRAMRDLDPPEVAPDLPQCYASDLRVPKTYREAVSSQHADLWIHSVEKEFRGLMEADC--------------------------------------------------GETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSM 1132

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 771 bits (1991), Expect = 2.350e-257
Identity = 491/1101 (44.60%), Postives = 612/1101 (55.59%), Query Frame = 3

Query:   57 LAAAALNPG--PLKHG---KEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVAD-----MGVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTW--HHPEVPLIATPIRAAPAEPPRDIYVPMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------IPLRVSREL----EHEGYVE--MPGRTRG---------------------EIRAFRDASR---------------------------DYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDLE-DVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIHRRFLMNLS 2972
            L AAAL PG  P   G   K VDIN  H SLAHA   +L+ TA+Q GI LT +L  C+ C +AK  RA  P    +RA+ PLG VH+D  GP   SLGG+ Y+ + VDSASR  + YG+R KS A  L+  KR +AD     +G    FR DNGTE +   F  FC+  GI  EFT P  PQ NG VES I R  KAG AAR    +++ D+    I    D  G  LW+ES  WA++  N++AT  N    SPHE+  G +    +LPF QP + R  R+ K D +A LCY++N G NH     ++L A TGRV Y+ +V+W    P     +  I AAP  PP   + P   S+     XXXXXXXXXXXXXXXXXXXXX     XX                                                              +     R+L    + EG  +  +P RTR                      E R+  D  R                                 G PL   A  ++LA  E  +  +R     +  PDLP   ASDL  P +  +   + H  +W  SM +EF GLL+AGTF PA                                                           ++L+A+ACE +LDLCHFD++QAFV+S+LE DV+ RLP+GCG LSG +V+L K LYGL+Q SR W+A L  CL  LGFEQCM D CV RLIEDG + +  VVHVD IFAVG++ERCD+  ADLN+++PVKNLG L+WY GC Y R+++ G LTISQQ+F +EL  ++ V   +SVP+  GVKL +FD DE A  +PFRELVG LMWLA  TRPDI+NAVR+VARYC++PK +HW +AMDIL Y   T  FGI++QR T  G SL+ +ADAD+ASKA DRR VSGG + C G  V WFSRTQKCVTLST+EAEYVALGD VKE+LFLRQ+WRFM+P  GMPC P+FEDNQGA+QL++NP+SNSNSKHIDVRHHFLRELV +  I V HVPS YQ  D LTK L+ D F  HR F+MNL+
Sbjct:  261 LGAAALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDA--LAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVF-DVDFASIPSL-DERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP---FTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAHAMRQLRPGTKAEGMTDPRLPSRTRSGTRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPL---AFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASEHRHLWSDSMQREFYGLLEAGTFTPA-----------------------------------------------------------KMLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNLA 1292

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 785 bits (2026), Expect = 1.590e-256
Identity = 479/1030 (46.50%), Postives = 596/1030 (57.86%), Query Frame = 3

Query:   57 LAAAALNPG--PLKHG---KEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADMG---VPR--AFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATPIRAAPAEPPRDIYVPMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLRVSREL----EHEGYVE--MPGRTRG---------------------EIRAFRDASR---------------------------DYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDLE-DVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIHR 2951
            L AAAL PG  P   G   K VDIN  H SLAHA   +L+ TA+Q GI LT +L  C+ C +AK  RA  P    +RA+ PLG VH+D  GP   SLGG+ Y+ + VDSASR  + YG+R KS A  L+  KR +AD+G   + R   FR DNGTE +   F  FC+  GI  EFT P  PQ NG VES I R  KAG AAR    +++  +    I G  D  G   W+ES  WA++  N++AT  N    SPHE+  G +    +LPF QP + R  R+ K D +A LCY++N G NH      +L A TGRV Y+ +V+W      + + P       PP     P P + P    XXXXXXXXXXXXXXX  X   X      +     R+L    + EG  +  +P RTR                      E R+  D  R                                 G PL   A  ++LA  E  +  +R     +  PDLP   ASDL  P +  +   + H  +W  SM +EF GLL+AGTF PA                                                           ++L+A+ACE +LDLCHFDV+QAFV+S+LE DV+ RLP+GCG LSG +V+L K LYGL+Q SR W+A L  CL  LGFEQCM D CV RLIEDG + +  VVHVD IFAVG++ERCD+  ADLN+++PVKNLG L+WY GC Y R+++ G LTISQQ+F +EL  ++ V   +SVP+  GVKL +FD DE A  +PFRELVG LMWLA  TRPDI+NAVR+VARYC++PK +HW +AMDIL Y   T  FGI++QR T  G SL+ +ADAD+ASKA DRR VSGG + C G  V WFSRTQKCVTLST+EAEYVALGD VKE+LFLRQ+WRFM+P  GMPC PVFEDNQGA+QL++NP+SNSNSKHIDVRHHFLRELV +  I V HVPS YQ  D LTK L  D F  H+
Sbjct:  621 LGAAALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDA--LAATKRLLADVGRYDLGRIDCFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVF-HVDFASIPGL-DERGDRPWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVTVLKASTGRVVYTNNVSW------VTSAPAGEGVPRPP-SATSPSPSATPAPGNXXXXXXXXXXXXXXXYQXPPPXDPAMPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSGTRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPL---AFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASEHRHLWSDSMQREFYGLLEAGTFTPA-----------------------------------------------------------KMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHQ 1577

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 775 bits (2002), Expect = 3.130e-253
Identity = 494/1098 (44.99%), Postives = 611/1098 (55.65%), Query Frame = 3

Query:   57 LAAAALNPG--PLKHG---KEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVAD-----MGVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTW--HHPEVPLIATPIRAAPAEPPRDIYV-----------------------------------------------------------PMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLRVSREL----EHEGYVE--MPGRTRG---------------------EIRAFRDASR---------------------------DYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDLE-DVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIHRRFLMNLS 2972
            L AAAL PG  P   G   K VDIN  H SLAHA   +L+ TA+Q GI LT +L  C+ C +AK  RA  P    +RA+ PLG VH+D  GP   SLGG+ Y+ + VDSASR  + YG+R KS A  L+  KR +AD     +G    FR DNGTE +   F  FC+  GI  EFT P  PQ NG VES I R  KAG AAR    +++  +    I G  D  G  LW+ES  WA++  N++AT  N    SPHE+  G +    +LPF QP + R  R+ K D +A LCY++N G NH     ++L A TGRV Y+ +V+W    P     +  I AAP  PP    V                                                           P P +     XXXXXXXXXXXXXXXX  XXXXXXX    +     R+L    + EG  +  +P RTR                      E R+  D  R                                 G PL   A  ++LA  E  +  +R     +  PDLP   ASDL  P +  +   + H  +W  SM +EF GLL+AGTF PA                                                           ++L+A+ACE +LDLCHFDV+QAFV+S+LE DV+ RLP+GCG LSG +V+L K LYGL+Q SR W+A L  CL  LGFEQCM D CV RLIEDG + +  VVHVD IFAVG++ERCD+  ADLN+++PVKNLG L+WY GC Y R+++ G LTISQQ+F +EL  ++ V   +SVP+  GVKL +FD DE A  +PFRELVG LMWLA  TRPDI+NAVR+VARYC++PK +HW +AMDIL Y   T  FGI++QR T  G SL+ +ADAD+ASKA DRR VSGG + C G  V WFSRTQKCVTLST+EAEYVALGD VKE+LFLRQ+WRFM+P  GMPC PVFEDNQGA+QL++NP+SNSNSKHIDVRHHFLRELV +  I V HVPS YQ  D LTK L  D F  HR F+MNL+
Sbjct:  767 LGAAALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDA--LAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVF-HVDFASIPGL-DERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXSASSTPAXXXXXXXXXXXXXXXXQXXSATSPSPSAXXXXXXXXXXXXXXXXXXXXXDQXXXXXXXAMPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSGTRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPL---AFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASEHRHLWSDSMQREFYGLLEAGTFTPA-----------------------------------------------------------KMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNLA 1798

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 760 bits (1962), Expect = 3.760e-240
Identity = 488/1093 (44.65%), Postives = 604/1093 (55.26%), Query Frame = 3

Query:   57 LAAAALNPG--PLKHG---KEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVAD-----MGVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTW--HHPEVPLIATPIRAAPAEPPRDIYVPMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------IPLRVSREL----EHEGYVE--MPGRTRG---------------------EIRAFRDASR---------------------------DYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDLE-DVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIH 2948
            L AAAL PG  P   G   K VDIN  H SLAHA   +L+ TA+Q GI LT +L  C+ C +AK  RA  P    +RA+ PLG VH+D  GP   SLGG+ Y+ + VDSASR  + YG+R KS A  L+  KR +AD     +G    FR DNGTE +   F  FC+  GI  EFT P  PQ NG VES I R  KAG AAR    +++  +    I G  D  G  LW+ES  WA++  N++AT  N    SPHE+  G +    +LPF QP + R  R+ K D +A LCY++N G NH     ++L A TGRV Y+ +V+W    P     +  I AAP  PP   + P   S+     XXXXXXXXXXXXXXXXXXXXX     XX                                                              +     R+L    + EG  +  +P RTR                      E R+  D  R                                 G PL   A  ++LA  E  +  +R     +  PDLP   ASDL  P +  +   + H  +W  SM +EF GLL+AGTF PA                                                           ++L+A+ACE +LDLCHFDV+QAFV+S+LE DV+ RLP+GCG LSG +V+L K LYGL+Q SR W+A L  CL  LGFEQCM D CV RLIEDG + +  VVHVD IFAVG++ERCD+  ADLN+++PVKNLG L+WY GC Y R+++ G LTISQQ+F +EL  ++ V   +SVP+  GVKL +FD DE A  +PFRELVG LMWLA  TRPDI+NAVR+VARYC++PK +HW +AMDIL Y   T  FGI++QR T  G SL+ +ADAD+ASKA DRR VSGG + C G  V WFSRTQKCVTLST+EAEYVALGD VKE+LFLRQ+WRFM+P  GMPC PVFEDNQGA+QL++NP+SNSNSKHIDVRHHFLRELV +  I V HVPS YQ  D LTK L  D F  H
Sbjct:  621 LGAAALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDA--LAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVF-HVDFASIPGL-DERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP---FTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSGTRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPL---AFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASEHRHLWSDSMQREFYGLLEAGTFTPA-----------------------------------------------------------KMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 1644

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE)

HSP 1 Score: 723 bits (1867), Expect = 4.090e-237
Identity = 470/1022 (45.99%), Postives = 587/1022 (57.44%), Query Frame = 3

Query:   24 PSRPEFRIGTPLAAAALNPGPLKHGKEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADM---GVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATPIRAAPAE--------------------------------PPR----------------DIYVPMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPL--RVSRELEHEGYVEMPGRTRGEIRAFRDASRD----------YAHRHGV--PLDHVAMVSMLAKGEATNE-------------------------------------------IVRQYSTSKD-------------SPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDLE-DVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIP 2723
            P  P F +G P +              +DIN  H S  H +  +++ TAKQ G++L  EL  C  C  AK  RAP P    +RA  P G VHID  GPY  +  GSRY++MFVDSASR QR YG+R KS    L+  +RF+AD+   G    FR DN  E ++  FV FC+  GIRRE+TAP TP+QN  VES I RA K G+AAR  V  +     L  I G  DA G  LWL S +WAS C+NR+ATS N  W+SP E  +G +P L ++PF Q    R  R  K D ++  C++++   NH      +L A+TGR+  S +V W +     +  P+ A+                                   PP                  I+       P++ XXXXXXXXXXXXXXXXXXXXXXXXXXXX  PL  R  REL  E    + GRTRG+   F D  +             HR G+   +   A+VS LA  EA ++                                               ++T +D             +PDLP   ASDL  P    +  ++ H+++W  ++ +E   LL A  F+P    Q V N I+AKWV+  K DE+GW  K K+RLVARG  QR  I FGE FAPTVS S VRLL+A+ACE +LDLCHFD+ QAFVQS+LE DVF RLP+GCG LSG +V+L K LYGLKQ SR W+AHLT CL  LGF QC+ D CV RL+ED  + +  VV VD IFAVGQK RCD+  +DLN  +PVKNLG L+WY  C Y RD +RG L ISQQ FAEEL  ++ V   +SVPL V VKL +FDE+E     PFRELVG LMWLA  TRPDI+NAVR+VARYC++PK +HWK+A+ IL Y+  T   GIT++R    GIS++VF DADYASKA DRR VSGG +MC G CV WFSRTQKCVTLST+EAEYVA+ D +KE+LFLRQVWRFM+P
Sbjct:  337 PGGPAFTVGKPTST-------------IDINLFHASTGHVNEFLMRETAKQQGVQLVGELQPCVGCIEAKGRRAPVPRRGVTRAAVPFGKVHIDITGPYSEAFDGSRYLIMFVDSASRWQRAYGMRAKSDT--LTYTRRFLADLNGNGPLGCFRMDNAGEFTSAAFVAFCDAAGIRREYTAPDTPKQNAVVESAIWRAMKGGHAARRHVLSMG-HFDLASIPGM-DANGHRLWLASAIWASGCFNRSATSGNPAWMSPFEAFFGRKPPLKVVPFFQEGMMRVKRASKADVQSVRCFYLHGARNHSDATAVVLRADTGRICLSNNVVWINRRT-AVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXWTSRTYTHTPPTAXXXXXXXXXXXXASPSIFTGSGAPSPISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-PLSHRAVRELG-EKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLATREAVDQGRRDLPPSANIAPPSPPPPQDTSLVGHGSGGAXXXXGPGGLHMFAAMFATREDVEATLRAKRPPDKTPDLPHCLASDLRVPKTFKEAMRSQHSELWDDAVGRESFVLLDACPFSPVL--QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEEDVFMRLPRGCGRLSGLIVKLYKSLYGLKQASRHWHAHLTRCLLLLGFVQCLADACVFRLMEDICVIMIIVVPVDDIFAVGQK-RCDKFGSDLNDMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGISMQVFLDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLP 1335

[Close]

BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 724 bits (1869), Expect = 4.640e-237
Identity = 431/972 (44.34%), Postives = 538/972 (55.35%), Query Frame = 3

Query:  123 HVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADM---GVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATPIRAAPAEPPRDIYVPMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLRVSRELEHE-GYVEMPGRTRGEIRAFRDASRDYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAG------TFAPAPA*Q------------LVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDLE-DVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIHRRFLMNL 2969
            H S  H +  +++ TAKQ G++L  EL  C  C  A+  RAP P    +RA  P G VHID  G Y  +  GSRYV+MFVDSASR QR YG+R KS    L+  +RF+AD+   G    FR DN  E ++  FV FC+  GIRRE+TAP TP+ N  VES I RA K G+AAR  V  +     L  I G  DA G  LWL S +WAS C+NR+ATS N  W+SP E  +G +P L ++PF Q    R  R  K D ++  C++++   NH      +L A+TGR+  S +V W +           A PA        P+P S   ++          XXXXXX              P      L+H  G + M G+                          A+VS LA  EA ++  R         DLP +       P    D     H             G  +AG       FAP  A +                                                                                LCHFD+ QAFVQS+LE DVF RLP+GCG LSG +V+L K LYGLKQ SR W+AHLT CL  LGF +C+ D CV RL+EDG + +  VVHVD IFAVGQKERCD+  +DLN  +PVKNLG L+WY  C Y RD +RG L ISQQ FAEEL  ++ V   +SVPL V VKL +FDE+E     PFRELVG LMWLA  TRPDI+NAVR+VARYC++PK +HWK+A+ IL Y+  T   GIT++R    G+S++VF DADYASKA DRR VSGG +MC G CV WFSRTQKCVTLST+EAEYVA+ D +KE+LFLRQVWRFM+P  GMPC PVFEDNQGA+Q++ NP++NSNSKHIDVRHHF+RELV +  I + HV SE+QH D LTK ++ + FA+HR F+MNL
Sbjct:  564 HASTGHVNEFLMRETAKQQGVQLVGELQPCVGCIEAEGKRAPVPRRGVTRAAVPFGKVHIDITGTYSEAFDGSRYVIMFVDSASRWQRAYGMRAKSDT--LTYTRRFLADLNGNGPLGCFRMDNAGEFTSAAFVAFCDAAGIRREYTAPDTPKHNAVVESAIWRAMKGGHAARRHVLSMG-HFDLASIPGM-DANGHRLWLASAIWASGCFNRSATSANPAWMSPFEAFFGRKPPLKVVPFFQEGMMRVKRASKADVQSVRCFYLHGARNHSDATAVVLRADTGRICLSNNVVWINRRT--------AVPA--------PVPASGGGSSVTAAPSPAAAXXXXXXDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKD-------------------------ALVSSLATREAVDQGRR---------DLPPSANIAPPAPPPPQDTSLAGHGS----------GGAARAGGPGGLHMFAPMFATREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHFDIQQAFVQSELEEDVFLRLPQGCGRLSGMIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVRCLADACVFRLMEDGCVIMIIVVHVDDIFAVGQKERCDKFGSDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNL 1471

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BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5K9I1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I1_9PHAE)

HSP 1 Score: 694 bits (1791), Expect = 4.270e-232
Identity = 411/971 (42.33%), Postives = 516/971 (53.14%), Query Frame = 3

Query:  327 SLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADM---GVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATPIRA-APAEPPRDIYV----------------PMPQSVP--------------------------------------------------------------------------------------------------------VAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLRVSRELEHEGYVEMPGRTRGEIRAF-----RDASRDYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDL-EDVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKW----------------YGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSN 2801
            SLGGS +++MFVDS SR  + YG+R KS    L+ VK F+ADM   GVPR FR DNG E     F+ FC+  GIRR +TAP TPQQNGP ES I R  KAG+AARL   +L+P I    + G     G  LWLES  WA+  +NR+ T  N  + SPHE+  GS P L ++PFLQP Y R  R RK DP+A LC ++N G NH     ++L   TGRV  + +V W     PL+  P+   APA+   D  V                P P + P                                                                                                          A                             +    +R +   G  E+P    G   A      R+ ++    R  VP    A  ++LA  E  +  +R     + +PDLP  +ASDL  P +V                                         I AKWV+ WK DE+GW    KSRLVARG  QR  +  GET+APTV+ S VRLL+A+ACE +L L HFD+ QAFVQSDL EDVF RLP+GCG LSG +V+LNK LYGLKQ SR W++HL  CL  LGF QCM D CV RLIE+GR+ +T VVHVD IF++G++ERCD+   DLN  +PVKNLG+L+W                Y GC Y RD   GTL ISQQ++AEEL  +F V   + +PL VG+KL EFD+DEE   WPFREL+G LMWLA  TRPDI+NAVR+VARYC++P  IHW++ + IL Y+  T   G+T++R +   +S+EVFADADYASKA DRR VSGG +MC G C+ WFSRTQKCVTLST+EAE+V L D +KE+LFLRQVWRFM+P  GMPC PVFEDNQGA+QL++NP+SN
Sbjct:    4 SLGGSFFMIMFVDSFSRWMKLYGMRRKSYT--LAFVKTFLADMSVTGVPRYFRMDNGGEFIGRDFIAFCDNAGIRRTYTAPGTPQQNGPAESAIWRVNKAGHAARLEAPRLFPKIDFTRVPGF-GRDGERLWLESCHWAAGGFNRSPTKANVGYKSPHELFTGSPPPLQIVPFLQPGYVRVTRARKMDPQAVLCCYLNNGDNHHESAVKVLKFATGRVCMTNNVVWVSDRAPLLTPPLELPAPADEGGDSNVAAAPFLIEYISPPLLPPSPYARPPTSPAAILSQAPXXXXXXXXXXXXXXXXXXXXXXTAXXATPLAAAPLFTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHRAACTAVRRRATFHHCRLASGLTVHHRRCTDKATFLSTLTTRSIVDGGRKEIPSSAGGRDGAEPGGREREGTKTEGLREEVPF---ACATLLASREDIDRAMRDLDPPEVAPDLPQCYASDLRQPESV-----------------------------------------IKAKWVFDWKSDEYGWPTNVKSRLVARGDMQRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTLVPVKNLGDLRWXXXXXXXXXXXXXXXXYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPIEIHWRAGIGILGYVVRTSDLGVTFRRGSVARLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEHVTLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISN 927

[Close]

BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5KSN7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSN7_9PHAE)

HSP 1 Score: 687 bits (1772), Expect = 9.040e-216
Identity = 465/1149 (40.47%), Postives = 586/1149 (51.00%), Query Frame = 3

Query:   36 EFRIGTPLAAAALNPGPL-KHGKEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADM---GVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATP---------------------IRAAPAE--PPRDIY------------VPMPQSVPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLRVSRELEHEGYVEMPGRTRGEIRAFRDASRDYAHRHGV----------------------------------------------------PLDHVAMVSMLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDL-EDVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYI-----------------------------------------------------NGTCRF-------------------------GITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELLFLRQVWRFMIPGKGMPCFPVFEDNQGALQLSKNPVSNSNSKHIDVRHHFLRELVRQGNIIVNHVPSEYQHTDILTKVLAFDLFAIHRRFLMNLS 2972
            +     P+ A    P  + K  K +D+N L+VS +HA+  +L+  AKQHG+RLT  L  C  C +AK  +A  PH + +RA  P  L HID  GP   SLGGS +++MFVDS SR  + YG+R KS    L+ VK+F+ADM   GVPR+FR DNG E     F+ FC+  GIRR +TAP TPQQNGP ES I R  KAG+AARL   +L+P I    + G     G  LWLES  WA+  +NR+ T  N  + SPHE+  G  P L ++PFLQP Y R  R RK DP+A LC ++N G NH     ++L   TGRV  + +V W     PL+  P                     IRA PA   PP                   P + P+AA  XXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                             P                           + P L T    +L               D+ R  M       + +G    A   Q                       + +     RG + R  +  GET+APTV+ S VRLL+A+ACE  L + HFD+ QAFVQS+L EDVF  LP+GCG LSG +V+LNK LYGLKQ SR W++HL  CL  LGF QC+ D CV RLIE+GR+  T VVHVD I ++G++ERCD+   DLN  +PVKN G+L+WY GC Y RD   GTL ISQQ++AEEL  KF V   + +PL VG+KL EFD+DEE   WPFREL+G LMWLA   RPDI+NAV++VARYC++PK IHW++ + IL Y+                                                         R+                         GIT++R +  G+S+EV ADAD ASKA DRR VSGG +MC G C+ W SRTQKCVTLST++AEYV+L D +KE+LFLRQVWRF +P  GMP  PVFEDN+GA+QL +NP+SNSNSKH+DVRHH +RELV +  I + HV S YQH D LTK L    F  H   L++L+
Sbjct:  655 DVAFAVPVMAPGKRPSSVGKPTKIIDVNLLYVSCSHANEFLLRELAKQHGLRLTGVLQPCGGCLQAKGKKAGVPHQLGTRAERPHDLWHIDLCGPMTASLGGSFFMIMFVDSFSRWMKLYGMRRKSDT--LAFVKKFLADMSGTGVPRSFRMDNGGEFIGRDFIAFCDNAGIRRTYTAPGTPQQNGPAESAIWRVNKAGHAARLEAPRLFPKIDFTRVPGF-GRDGERLWLESCHWAAGGFNRSPTKANVGYKSPHELFTGRPPPLQIVPFLQPGYMRVTRARKMDPQAVLCCYLNNGDNHHESVVKVLKFATGRVCMTNNVVWVSDRAPLLTPPLEMPAPAGEGGDSDVAAAPFLIRAPPATSTPPXXXXXXXXXXXXXPFTTTAPXATPLAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPPASXXXXXXXXXXXXXXXXXXXXXXXXTNMPPLTTRTIREL---------------DVGRGDM-------MVSGRTRAAAKDQGXXXXXXXXXXXXXXXXXXXXXXETRVPGKMRG-RGRVHVDCGETYAPTVAVSSVRLLAAMACEQKLSVRHFDIKQAFVQSNLDEDVFMCLPEGCGRLSGMIVKLNKSLYGLKQVSRQWHSHLARCLICLGFIQCLADTCVFRLIEEGRVVATLVVHVDDILSIGEEERCDQFGRDLNTMVPVKNRGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMKFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQMRPDIANAVKAVARYCASPKEIHWRAGLGILGYVVRASDLGITFRRGSVAGLGMEVSADADDASKAADRRSVSGGLVXMRPDIANAVKAVARYCASPKEIHWRAGLGILGYVVRASDLGITFRRGSVAGLSMEVSADADDASKAADRRSVSGGLVMCGGGCISWLSRTQKCVTLSTTQAEYVSLADVMKEVLFLRQVWRFTLPEAGMPFIPVFEDNRGAIQLVQNPISNSNSKHLDVRHHCIRELVGRKEISIFHVESAYQHADFLTKALDVGDFEFHDYNLVSLT 1777

[Close]

BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Match: A0A6H5KKG5_9PHAE (Integrase catalytic domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG5_9PHAE)

HSP 1 Score: 645 bits (1663), Expect = 8.690e-211
Identity = 439/1118 (39.27%), Postives = 557/1118 (49.82%), Query Frame = 3

Query:   15 VNTPSRPEFRIGTPLAAAALNPGPLKHGKEVDINHLHVSLAHAHASVLKATAKQHGIRLTVELVSCSACSRAKRHRAPTPHHVTSRATHPLGLVHIDTAGPYPTSLGGSRYVVMFVDSASRLQRPYGVREKSAAAILSLVKRFVADM---GVPRAFRTDNGTESSNNLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLYPDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVYGSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLDAETGRVAYSRDVTWHHPEVPLIATPIR--------------AAP----------------AEPPRDIYVPMPQSVPV-----------------------------------------------------------------------------------------AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLRVSRELEHEGYVEM----------------------------------------PGRTRGEIRAFRDASRD-----------YAHRHGVPL--DHVAMVS--------------------------------------------------MLAKGEATNEIVRQYSTSKDSPDLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA*QLVANVIDAKWVYTWKVDEHGWVVKAKSRLVARGFKQREGIYFGETFAPTVSSSCVRLLSAIACECDLDLCHFDVDQAFVQSDL-EDVFPRLPKGCGDLSGKVVRLNKRLYGLKQTSRTWYAHLTTCLKRLGFEQCMTDVCVVRLIEDGRMAITAVVHVDGIFAVGQKERCDRLCADLNRTIPVKNLGNLKWYGGCRYSRDRKRGTLTISQQSFAEELVEKFHVTSVQSVPLKVGVKLEEFDEDEEAGCWPFRELVGGLMWLAISTRPDISNAVRSVARYCSAPKAIHWKSAMDILAYINGTCRFGITYQRETTVGISLEVFADADYASKATDRRFVSGGAIMCAGTCVCWFSRTQKCVTLSTSEAEYVALGDAVKELL 2690
            V  P +  F +G P              K +D+N LHVS +HA+  +L+  AKQHG+RLT  L  C  C +AK  +A  PH + +RA  P  L HID  GP   SLGGS +++MFVDS SR  + YG+R KS    L+ VK+F+ADM   GVPR+FR DNG E     F+ FC+  GIRR +TAP TPQQNGP ES I R  KAG+AARL   +L+P I    + G     G  LWLES  WA+  +NR+ T  N  + SPHE+  G  P L ++PFLQP Y R  R RK DP+A LC ++N G NH     ++L   TGRV  + +V W     PL+  P+               AAP                A PP      + Q+ P                                                                                          A+XXXXXXXXXXXXXXXXXXXXXXXX     +  R  REL+  G  +M                                        PGR RG    F+D   +            AHR G+    D   ++S                                                  +LA  E  +  +      + +PDLP  +ASDL  P    +   + HAD+W HS+ +EF GL++A                                                    GET+APTV+ S VRLL+A+ACE +L L HFD+ QAFVQSDL EDVF RLP+GCG LSG +V+LNK LYGLKQ SR W++HL  CL  LGF QCM D CV RLIE+GR+ +T VVHVD IF++G++ERCD+   DLN  +PVKNLG+L+WY GC Y RD   GTL ISQQ++AEEL  +F V   + +PL VG+KL EFD+DEE   WPFR L+G LMWLA  TRPDI+NAVR+V RYC++PK IHW++ + IL Y+  T   GIT++R +   +S+EVFADAD A KA DRR VSGG +MC G C+ WFSRTQKCVTLST+EAEY +L D +KE+L
Sbjct:   19 VMAPGKRPFSVGKPT-------------KIIDVNLLHVSSSHANEFLLRELAKQHGLRLTGVLQPCGGCLQAKGKKAGVPHQLGTRAERPHDLWHIDLCGPMTASLGGSFFMIMFVDSFSRWMKLYGMRRKSDT--LAFVKKFLADMSGTGVPRSFRMDNGGEFIGRDFIAFCDNAGIRRTYTAPGTPQQNGPAESAIWRVNKAGHAARLEAPRLFPKIDFTRVPGF-GRDGERLWLESCHWAAGGFNRSPTKANVGYKSPHELFTGRPPPLQIVPFLQPGYMRVTRARKMDPQAVLCCYLNNGDNHHESAVKVLKFATGRVCMTNNVVWVSDRAPLLTPPLELPAPADEGGDSNVAAAPFLIEYISPPLLPPSPYARPPTSPAAILSQAPPATSTXXXXXXXXXXXXXXPPVTAXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPPASXXXXXXXXXXXXXXXXXXXXXXXXTNMPPLTTRTIRELD-VGRADMRVSGRTRAAAKDQXXXXXXXXXXXXXXXXXXXXXXXETRVPGRLRGRRVRFQDGGAERSTSPGGSGDALAHRFGLVSLQDKATLLSTLTTRSIVDGGRKEIPSSAGGRDGAEPGGRERGGTKKEGLREEVPFACATLLASREDIDRAMMDLDPPEVAPDLPQCYASDLRVPKTYREAVSSQHADLWIHSVEKEFRGLMEADC--------------------------------------------------GETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDFIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRGLIGSLMWLATQTRPDIANAVRAVERYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVARLSMEVFADADCARKAADRRSVSGGLVMCVGGCISWFSRTQKCVTLSTTEAEYASLADVMKEVL 1069

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1190.1476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K2R1_9PHAE	9.260e-270	42.54	Integrase catalytic domain-containing protein n=3 ...	[more]
A0A6H5JG40_9PHAE	2.350e-257	44.60	Integrase catalytic domain-containing protein n=3 ...	[more]
A0A6H5L867_9PHAE	1.590e-256	46.50	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J4N2_9PHAE	3.130e-253	44.99	Integrase catalytic domain-containing protein n=18...	[more]
A0A6H5KBD4_9PHAE	3.760e-240	44.65	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JKY9_9PHAE	4.090e-237	45.99	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JHY5_9PHAE	4.640e-237	44.34	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5K9I1_9PHAE	4.270e-232	42.33	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KSN7_9PHAE	9.040e-216	40.47	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KKG5_9PHAE	8.690e-211	39.27	Integrase catalytic domain-containing protein n=6 ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1190	contig	F-serratus_M_contig1190:191246..194498 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-19
OGS1.0 of Fucus serratus male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Viridiplantae
Seed ortholog score	80.9
Seed ortholog evalue	1.5e-12
Seed eggNOG ortholog	4558.Sb08g008672.1
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs	37THH@33090,3GG2K@35493,3IKX9@38820,3M2IR@4447,COG2801@1,KOG0017@2759
COG Functional cat.	L
Best tax level	Poales
Best eggNOG OG	NA\|NA\|NA
Exons	1
Model size	3253
Cds size	1203
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1190.1476.1	prot_F-serratus_M_contig1190.1476.1	Fucus serratus male	polypeptide	F-serratus_M_contig1190 191599..192801 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929087.6934-UTR-F-serratus_M_contig1190:191245..191598	1622929087.6934-UTR-F-serratus_M_contig1190:191245..191598	Fucus serratus male	UTR	F-serratus_M_contig1190 191246..191598 +
1690962699.3288078-UTR-F-serratus_M_contig1190:191245..191598	1690962699.3288078-UTR-F-serratus_M_contig1190:191245..191598	Fucus serratus male	UTR	F-serratus_M_contig1190 191246..191598 +
1622929087.717382-UTR-F-serratus_M_contig1190:192801..194498	1622929087.717382-UTR-F-serratus_M_contig1190:192801..194498	Fucus serratus male	UTR	F-serratus_M_contig1190 192802..194498 +
1690962699.3537595-UTR-F-serratus_M_contig1190:192801..194498	1690962699.3537595-UTR-F-serratus_M_contig1190:192801..194498	Fucus serratus male	UTR	F-serratus_M_contig1190 192802..194498 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929087.7070343-CDS-F-serratus_M_contig1190:191598..192801	1622929087.7070343-CDS-F-serratus_M_contig1190:191598..192801	Fucus serratus male	CDS	F-serratus_M_contig1190 191599..192801 +
1690962699.3431766-CDS-F-serratus_M_contig1190:191598..192801	1690962699.3431766-CDS-F-serratus_M_contig1190:191598..192801	Fucus serratus male	CDS	F-serratus_M_contig1190 191599..192801 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at F-serratus_M_contig1190:191246..194498+
coding sequence from alignment at F-serratus_M_contig1190:191246..194498+

protein sequence of mRNA_F-serratus_M_contig1190.1476.1

>prot_F-serratus_M_contig1190.1476.1 ID=prot_F-serratus_M_contig1190.1476.1|Name=mRNA_F-serratus_M_contig1190.1476.1|organism=Fucus serratus male|type=polypeptide|length=401bp
MFVDSASRLQRPYGVREKSAAAILSLVKRFVADMGVPRAFRTDNGTESSN
NLFVDFCNGLGIRREFTAPYTPQQNGPVESEISRAFKAGNAARLGVTQLY
PDIRLEEIRGCTDAAGTILWLESLLWASECYNRAATSVNNEWLSPHEIVY
GSRPQLPLLPFLQPAYHRGPRQRKTDPRARLCYFINFGYNHGRDCYRLLD
AETGRVAYSRDVTWHHPEVPLIATPIRAAPAEPPRDIYVPMPQSVPVAAP
SPAPVATPPAPAPAATLPPTRTSNSPAPIPLRVSRELEHEGYVEMPGRTR
GEIRAFRDASRDYAHRHGVPLDHVAMVSMLAKGEATNEIVRQYSTSKDSP
DLPTAHASDLTTPHNVSDVEKTPHADIWRHSMHQEFDGLLQAGTFAPAPA
*

mRNA from alignment at F-serratus_M_contig1190:191246..194498+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_F-serratus_M_contig1190.1476.1 ID=mRNA_F-serratus_M_contig1190.1476.1|Name=mRNA_F-serratus_M_contig1190.1476.1|organism=Fucus serratus male|type=mRNA|length=3253bp|location=Sequence derived from alignment at F-serratus_M_contig1190:191246..194498+ (Fucus serratus male)
AAATCAAGTTCGTAGTGAACACCCCCTCTAGGCCGGAGTTTAGGATCGGC
ACCCCCCTGGCAGCGGCTGCCCTGAACCCAGGGCCTCTAAAACATGGCAA
AGAAGTCGATATTAACCACTTGCATGTTTCCCTTGCCCACGCCCATGCGA
GTGTGCTGAAAGCGACAGCGAAACAGCATGGGATCCGCTTGACCGTGGAA
CTAGTTTCATGTTCGGCTTGTTCTAGAGCGAAGAGACACCGAGCACCTAC
CCCACATCACGTGACGAGTCGAGCGACGCACCCGCTGGGACTTGTTCACA
TCGACACCGCAGGGCCCTACCCAACTTCGCTTGGAGGGTCGCGGTACGTT
GTGATGTTCGTCGACAGCGCTTCGCGTCTACAGCGGCCATACGGCGTGCG
CGAGAAGAGCGCGGCCGCCATTCTTTCCCTCGTGAAACGCTTCGTGGCAG
ACATGGGAGTTCCACGCGCGTTCCGCACTGACAACGGTACGGAGTCCTCG
AATAATCTGTTCGTGGACTTCTGCAATGGCCTCGGAATTCGTCGCGAGTT
TACGGCACCGTATACGCCACAGCAGAATGGACCCGTCGAGAGCGAGATAT
CGCGAGCTTTCAAGGCTGGAAACGCGGCGCGACTGGGAGTTACACAGCTG
TACCCGGACATCCGCCTGGAAGAGATCCGAGGTTGTACCGACGCGGCAGG
AACAATCCTCTGGCTGGAGTCGCTACTCTGGGCATCGGAGTGCTACAACA
GGGCGGCAACATCAGTGAACAACGAGTGGCTTTCCCCTCACGAGATTGTC
TACGGGAGTCGCCCGCAGTTGCCACTGCTGCCCTTCCTCCAGCCCGCCTA
TCATCGTGGGCCGCGACAGCGGAAGACAGATCCCCGGGCCCGTCTGTGCT
ACTTTATTAATTTTGGGTATAATCACGGGCGGGATTGCTACCGGCTCCTG
GATGCGGAGACGGGGAGGGTCGCCTATTCGCGCGACGTCACCTGGCACCA
CCCGGAAGTACCGTTGATCGCCACCCCGATCCGGGCCGCGCCAGCAGAAC
CGCCGAGGGACATCTACGTCCCCATGCCGCAGTCTGTGCCCGTCGCCGCG
CCATCTCCTGCACCCGTCGCCACTCCGCCAGCTCCCGCACCGGCAGCGAC
ACTACCGCCTACGAGAACGTCGAACTCCCCGGCCCCGATCCCCCTGCGCG
TTAGTCGCGAATTAGAACACGAGGGATACGTGGAGATGCCCGGGAGGACG
CGTGGCGAGATCCGTGCATTTCGCGATGCGTCAAGGGATTACGCCCATCG
TCATGGTGTACCATTGGACCATGTGGCTATGGTGTCAATGCTGGCAAAAG
GCGAAGCAACCAACGAGATCGTTCGCCAATATAGCACCTCCAAGGACTCG
CCGGATCTACCGACCGCGCATGCATCGGACCTGACCACACCCCACAATGT
GTCCGACGTGGAGAAGACGCCCCATGCAGACATATGGCGACACTCCATGC
ACCAGGAGTTCGATGGTCTATTACAGGCAGGTACCTTCGCGCCGGCACCG
GCCTAGCAATTAGTCGCGAACGTGATCGATGCTAAGTGGGTGTACACGTG
GAAAGTAGATGAACATGGATGGGTAGTAAAGGCTAAGTCGAGGTTAGTAG
CGCGTGGTTTCAAACAGCGTGAAGGGATATACTTTGGTGAGACGTTTGCC
CCCACTGTGTCGAGTTCCTGCGTGCGTCTTCTGAGTGCGATTGCGTGTGA
GTGTGACTTAGATCTTTGTCATTTTGACGTAGACCAAGCTTTTGTTCAGT
CTGATCTCGAAGATGTTTTTCCGCGATTGCCGAAAGGATGTGGCGATCTT
TCAGGAAAGGTCGTTCGGCTCAACAAACGTTTGTATGGATTGAAGCAGAC
ATCGCGTACATGGTATGCTCACCTAACGACGTGTCTCAAAAGACTAGGTT
TCGAGCAATGCATGACAGATGTATGTGTTGTTCGTTTGATTGAGGACGGA
CGTATGGCAATCACAGCCGTTGTGCACGTCGATGGTATTTTTGCTGTAGG
ACAGAAAGAAAGGTGTGACAGGTTATGCGCTGACTTGAACCGAACCATTC
CTGTCAAGAACCTAGGTAATTTGAAGTGGTATGGAGGATGCCGATACTCG
AGGGATCGCAAAAGGGGTACTCTGACGATATCCCAACAGAGTTTCGCGGA
AGAGTTGGTGGAGAAATTCCATGTGACTTCCGTACAGAGCGTTCCACTTA
AAGTAGGAGTTAAACTGGAGGAGTTTGACGAAGACGAGGAAGCTGGGTGT
TGGCCGTTTCGTGAACTTGTTGGTGGTTTAATGTGGTTGGCGATTTCGAC
ACGTCCCGATATTTCCAACGCAGTTCGATCTGTTGCGAGGTACTGCTCCG
CACCGAAAGCCATCCACTGGAAATCGGCCATGGACATTCTAGCATACATC
AATGGTACTTGTCGTTTTGGCATTACGTACCAGCGAGAGACCACAGTAGG
TATTTCTTTAGAGGTTTTTGCCGACGCAGACTACGCCAGCAAAGCAACCG
ACAGGAGGTTTGTGTCAGGCGGTGCGATTATGTGTGCAGGTACATGTGTG
TGTTGGTTTTCTAGGACGCAGAAATGTGTCACCCTTTCTACTTCGGAGGC
AGAGTACGTTGCCCTTGGCGATGCAGTAAAAGAGTTATTGTTCTTGAGGC
AAGTTTGGCGTTTCATGATACCTGGTAAGGGAATGCCGTGTTTTCCTGTC
TTTGAGGACAACCAAGGTGCTTTGCAACTCTCTAAGAACCCGGTGTCGAA
CTCAAATTCGAAACATATCGATGTTCGTCATCATTTCTTGAGAGAGCTCG
TCCGCCAGGGGAACATTATCGTAAATCACGTTCCATCTGAGTATCAGCAT
ACGGATATATTGACGAAAGTTTTAGCGTTTGACTTGTTCGCGATCCACCG
GCGTTTCTTGATGAATCTTAGTGATTGATGGAGTTGTGACTTGGTGGATC
AGCAAGTTAGTGTATGTTTGTATGAACGTTCATGTGGTGACACAGCTGGG
GGGCTGTATGAATTCCAGTAAAAATGAGAGAACGGATCAGGGGGGCAGTA
AAGAAGCATCTATCTGATTTACTCGTCTTGGGGGGCTGAAAAGGGTAAGA
CTCCAAATTACGTATAGATAGATTGCTGTCAGTACACGATGCTAGGATGG
GTTTCCATATTTGCATTGTGGGATACTTGTACGGGATACCAGTATTACTG
CTC

Coding sequence (CDS) from alignment at F-serratus_M_contig1190:191246..194498+

>mRNA_F-serratus_M_contig1190.1476.1 ID=mRNA_F-serratus_M_contig1190.1476.1|Name=mRNA_F-serratus_M_contig1190.1476.1|organism=Fucus serratus male|type=CDS|length=2406bp|location=Sequence derived from alignment at F-serratus_M_contig1190:191246..194498+ (Fucus serratus male)
ATGTTCGTCGACAGCGCTTCGCGTCTACAGCGGCCATACGGCGTGCGCGA
GAAGAGCGCGGCCGCCATTCTTTCCCTCGTGAAACGCTTCGTGGCAGACA
TGGGAGTTCCACGCGCGTTCCGCACTGACAACGGTACGGAGTCCTCGAAT
AATCTGTTCGTGGACTTCTGCAATGGCCTCGGAATTCGTCGCGAGTTTAC
GGCACCGTATACGCCACAGCAGAATGGACCCGTCGAGAGCGAGATATCGC
GAGCTTTCAAGGCTGGAAACGCGGCGCGACTGGGAGTTACACAGCTGTAC
CCGGACATCCGCCTGGAAGAGATCCGAGGTTGTACCGACGCGGCAGGAAC
AATCCTCTGGCTGGAGTCGCTACTCTGGGCATCGGAGTGCTACAACAGGG
CGGCAACATCAGTGAACAACGAGTGGCTTTCCCCTCACGAGATTGTCTAC
GGGAGTCGCCCGCAGTTGCCACTGCTGCCCTTCCTCCAGCCCGCCTATCA
TCGTGGGCCGCGACAGCGGAAGACAGATCCCCGGGCCCGTCTGTGCTACT
TTATTAATTTTGGGTATAATCACGGGCGGGATTGCTACCGGCTCCTGGAT
GCGGAGACGGGGAGGGTCGCCTATTCGCGCGACGTCACCTGGCACCACCC
GGAAGTACCGTTGATCGCCACCCCGATCCGGGCCGCGCCAGCAGAACCGC
CGAGGGACATCTACGTCCCCATGCCGCAGTCTGTGCCCGTCGCCGCGCCA
TCTCCTGCACCCGTCGCCACTCCGCCAGCTCCCGCACCGGCAGCGACACT
ACCGCCTACGAGAACGTCGAACTCCCCGGCCCCGATCCCCCTGCGCGTTA
GTCGCGAATTAGAACACGAGGGATACGTGGAGATGCCCGGGAGGACGCGT
GGCGAGATCCGTGCATTTCGCGATGCGTCAAGGGATTACGCCCATCGTCA
TGGTGTACCATTGGACCATGTGGCTATGGTGTCAATGCTGGCAAAAGGCG
AAGCAACCAACGAGATCGTTCGCCAATATAGCACCTCCAAGGACTCGCCG
GATCTACCGACCGCGCATGCATCGGACCTGACCACACCCCACAATGTGTC
CGACGTGGAGAAGACGCCCCATGCAGACATATGGCGACACTCCATGCACC
AGGAGTTCGATGGTCTATTACAGGCAGGTACCTTCGCGCCGGCACCGGCC
TAGATGTTCGTCGACAGCGCTTCGCGTCTACAGCGGCCATACGGCGTGCG
CGAGAAGAGCGCGGCCGCCATTCTTTCCCTCGTGAAACGCTTCGTGGCAG
ACATGGGAGTTCCACGCGCGTTCCGCACTGACAACGGTACGGAGTCCTCG
AATAATCTGTTCGTGGACTTCTGCAATGGCCTCGGAATTCGTCGCGAGTT
TACGGCACCGTATACGCCACAGCAGAATGGACCCGTCGAGAGCGAGATAT
CGCGAGCTTTCAAGGCTGGAAACGCGGCGCGACTGGGAGTTACACAGCTG
TACCCGGACATCCGCCTGGAAGAGATCCGAGGTTGTACCGACGCGGCAGG
AACAATCCTCTGGCTGGAGTCGCTACTCTGGGCATCGGAGTGCTACAACA
GGGCGGCAACATCAGTGAACAACGAGTGGCTTTCCCCTCACGAGATTGTC
TACGGGAGTCGCCCGCAGTTGCCACTGCTGCCCTTCCTCCAGCCCGCCTA
TCATCGTGGGCCGCGACAGCGGAAGACAGATCCCCGGGCCCGTCTGTGCT
ACTTTATTAATTTTGGGTATAATCACGGGCGGGATTGCTACCGGCTCCTG
GATGCGGAGACGGGGAGGGTCGCCTATTCGCGCGACGTCACCTGGCACCA
CCCGGAAGTACCGTTGATCGCCACCCCGATCCGGGCCGCGCCAGCAGAAC
CGCCGAGGGACATCTACGTCCCCATGCCGCAGTCTGTGCCCGTCGCCGCG
CCATCTCCTGCACCCGTCGCCACTCCGCCAGCTCCCGCACCGGCAGCGAC
ACTACCGCCTACGAGAACGTCGAACTCCCCGGCCCCGATCCCCCTGCGCG
TTAGTCGCGAATTAGAACACGAGGGATACGTGGAGATGCCCGGGAGGACG
CGTGGCGAGATCCGTGCATTTCGCGATGCGTCAAGGGATTACGCCCATCG
TCATGGTGTACCATTGGACCATGTGGCTATGGTGTCAATGCTGGCAAAAG
GCGAAGCAACCAACGAGATCGTTCGCCAATATAGCACCTCCAAGGACTCG
CCGGATCTACCGACCGCGCATGCATCGGACCTGACCACACCCCACAATGT
GTCCGACGTGGAGAAGACGCCCCATGCAGACATATGGCGACACTCCATGC
ACCAGGAGTTCGATGGTCTATTACAGGCAGGTACCTTCGCGCCGGCACCG
GCCTAG