prot_F-serratus_M_contig1.3.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1.3.1
Unique Nameprot_F-serratus_M_contig1.3.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length400
Homology
BLAST of mRNA_F-serratus_M_contig1.3.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.040e-66
Identity = 183/399 (45.86%), Postives = 232/399 (58.15%), Query Frame = 0
Query:    7 ESISVATPPT-VETGEAFSVEWDFTTDSEVSGTTGDLHPFQIELRSCGADTS---DCK-SPACGSSYVSLCQREGG--CMDSDGSYDVVVPTDVTVGDYVIKVTYMGLSGWDSGSSSTSGEE-VGACSDTFSVEQSESVATEGMPSLEAITPQSELQAGEPFTARWLYDDGEGNGDGAFEVNLYECPDGACTEGSCGELVEALCDTGGCYDPGMGDYDVRLPATISPGKFKLQVKKTAEGIGEDDDETASSCTESSFDV-VSPSNSSANASPAPTPAAAVTSSPTAVTPAPLAETASTTIETEAPAPXXXXXXXXXXXXXXMTVTEFPTPAPTDALPTTTSDXXXXXXGSETAGVPPTPVPARVECSSAAVLTYSYTVASSGM-PLVTIVHESGDRDEG 395
            E  +VA P + +  G   +V W ++TD+   GTTGDL PF+IELRSCG D +   +C     CG+ Y++LC  E G  CMDSDGSYDV++P DV  G YV  VT++GLS W SG+SSTS    V  CS++F VE++   A + + + EA    S LQ G+ FTA W Y+  +G  +G FEVNL+ C D AC + SCG LV  LC   GCYDPG GDYDVR+PA  +PG FKLQVK+ +       DE A  C+   F V  + S+SS+      TPA          TPAP+  +            XXXXXXXXXXXXXX         AP   +P+ TS         E  G PPTPVP RV C  AAV+ +SY + +S + PL+TI HES DRDEG
Sbjct:   77 EITNVAAPRSNLTAGTYHTVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDDAQQAECGLGELCGNEYLALCDLERGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDAGLVTGCSESFFVEEA---AAKDVLATEAPAASS-LQPGDAFTAEWEYEGVDGEANGRFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVST------DEEA--CSAEYFVVEAAASDSSSGTRAVSTPAXXXXXXXXXXTPAPVISSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEAAP---VPSATSSATE---SGEIPGTPPTPVPLRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEG 457          
BLAST of mRNA_F-serratus_M_contig1.3.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 5.140e-22
Identity = 75/245 (30.61%), Postives = 90/245 (36.73%), Query Frame = 0
Query:  152 SELQAGEPFTARWLYDDGEGNGDGAFEVNLYECPDGACTEGSCGELVEALCDTGGCYDPGMGDYDVRLPATISPGKFKLQVKKTAEGIGEDDDETASSCTESSFDVVSPSNSSANASPAPTPAAAVTSSPTAVTPAPLAETASTTIETEAPAPXXXXXXXXXXXXXXMTVTEFPTPAPTDALPTTTSDXXXXXXGSETAGVPPTPVPARVECSSAAVLTYSYTVASSGM-PLVTIVHESGDRDEG 395
            S LQ G+ FTA W Y+  +G  +G FEVNL+ C D AC + SCG LV  LC   GCYDPG GDYDVR+PA  +PG FKLQ+                                                                                                                      G PPTPVP RV C  AAV+ +SY + +S + PL+TI HES DRDEG
Sbjct:  134 SSLQPGDAFTAEWEYEGADGETNGNFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQIP---------------------------------------------------------------------------------------------------------------------GTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEG 261          
BLAST of mRNA_F-serratus_M_contig1.3.1 vs. uniprot
Match: A0A6H5JKQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 5.500e-14
Identity = 72/219 (32.88%), Postives = 101/219 (46.12%), Query Frame = 0
Query:    3 AVAKESISVATPPTVETGEAFSVEWDFTTDSEVSGTTGDLHPFQIELRSCGADTSDCKSPACGSSY-VSLCQREG-----GCMDSDGSYDVVVPTDVTVGDYVIKVTYMGLSGWDSGSSSTSGEEVGACSDTFSVEQSESVATEGMPSLEAITPQSE------------LQAGEPFTARWLY---------DDGEG--NGDGAFEVNLYECPDGACTEG 192
            AV  +  + ATP  +  G  F+  W + +D     TTGDL  ++I L  C A   +C+  + G+   +SLC   G     GC+DSDGSYD+ VP+    G Y+++V+       D  S+      V AC+  FSVEQ E    E  P L   +   +            +  GE  TA+WLY         DDGEG     G+F V+L+ C   AC  G
Sbjct:   16 AVISDVATSATP--LYLGGDFTATWSYASDDGEPTTTGDLRVYEISLEPCAA-AGECECDSEGNPLAISLCDDAGTTTTFGCVDSDGSYDLTVPSTAEPGVYLVRVSLK-----DDPSA------VFACTFGFSVEQEEE---EVEPDLSVTSSSGDHGSWIEVFEVASVAPGEAVTAKWLYRDGSEGDDEDDGEGAVGSPGSFAVDLHSCDGEACANG 217          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J745_9PHAE1.040e-6645.86MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7G261_ECTSI5.140e-2230.61Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JKQ5_9PHAE5.500e-1432.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1contigF-serratus_M_contig1:85631..110882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1.3.1mRNA_F-serratus_M_contig1.3.1Fucus serratus malemRNAF-serratus_M_contig1 76751..110948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1.3.1 ID=prot_F-serratus_M_contig1.3.1|Name=mRNA_F-serratus_M_contig1.3.1|organism=Fucus serratus male|type=polypeptide|length=400bp
MFAVAKESISVATPPTVETGEAFSVEWDFTTDSEVSGTTGDLHPFQIELR
SCGADTSDCKSPACGSSYVSLCQREGGCMDSDGSYDVVVPTDVTVGDYVI
KVTYMGLSGWDSGSSSTSGEEVGACSDTFSVEQSESVATEGMPSLEAITP
QSELQAGEPFTARWLYDDGEGNGDGAFEVNLYECPDGACTEGSCGELVEA
LCDTGGCYDPGMGDYDVRLPATISPGKFKLQVKKTAEGIGEDDDETASSC
TESSFDVVSPSNSSANASPAPTPAAAVTSSPTAVTPAPLAETASTTIETE
APAPIETEAPAPIETEAPMTVTEFPTPAPTDALPTTTSDSSSSSTGSETA
GVPPTPVPARVECSSAAVLTYSYTVASSGMPLVTIVHESGDRDEGVVRR*
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