mRNA_F-serratus_M_contig1181.1447.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1181.1447.1
Unique NamemRNA_F-serratus_M_contig1181.1447.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: D8LC26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC26_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 6.780e-110
Identity = 165/188 (87.77%), Postives = 177/188 (94.15%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIA-NKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIAQEAE 561
            MKTLL+TR+V IP+ V +DVKSR+VTV GPRGEL QSFKHLNLD+QK   NKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSI+G+TVEIRNFLGEKRVRRV+LA GVDY+RT+DVKDQIELSGNDI+AVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNI QE E
Sbjct:    1 MKTLLATRYVTIPEGVTIDVKSRVVTVTGPRGELVQSFKHLNLDLQKSGKNKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQEDE 188
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A836CAK5_9STRA (Ribosomal protein L6, alpha-beta domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK5_9STRA)

HSP 1 Score: 291 bits (745), Expect = 6.660e-95
Identity = 140/187 (74.87%), Postives = 165/187 (88.24%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKI--ANKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIAQE 555
            MKT+L+TR++DIP+ V +DVKSR+V+V+GPRG L+++FKHLNLDIQK     KLRVDLWFGNRKQLACIRT+CSH+EN+ITGVTKG+LYKMRFCYAHFPINV+++ RTVEIRNFLGEKRVRRV L +GVDY+R+  +KDQIELSGNDI  VS  AARI Q+ +VK KDIRKFLDGIYVSEK NI QE
Sbjct:    1 MKTVLATRYIDIPEGVKVDVKSRVVSVEGPRGSLTRNFKHLNLDIQKADGGKKLRVDLWFGNRKQLACIRTVCSHIENLITGVTKGFLYKMRFCYAHFPINVTLTDRTVEIRNFLGEKRVRRVVLCDGVDYVRSTTIKDQIELSGNDIADVSNMAARISQACTVKNKDIRKFLDGIYVSEKTNIVQE 187
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A7S2XV97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV97_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.370e-91
Identity = 137/180 (76.11%), Postives = 165/180 (91.67%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIA-NKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 537
            MKT+L+TRFV+IPD V L+VK+R V+V+GPRG+L ++FKH +LD++ +  NKLRVDLWFGNRKQLACIRTICSH+ENMITGVTKG+LYKMRF YAHFPINV++  RTVEIRNFLGEKRVRRV+L EGV Y+RT++VKDQIEL+GND+ AVS+TAA+IQQST+VK KDIRKFLDGIYVS+K
Sbjct:    8 MKTILATRFVEIPDGVQLNVKARTVSVEGPRGKLERAFKHQSLDMRLVGKNKLRVDLWFGNRKQLACIRTICSHIENMITGVTKGFLYKMRFVYAHFPINVTLVDRTVEIRNFLGEKRVRRVELMEGVTYVRTSNVKDQIELTGNDLTAVSLTAAQIQQSTTVKNKDIRKFLDGIYVSQK 187
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A7S2GU27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GU27_9STRA)

HSP 1 Score: 269 bits (688), Expect = 2.480e-86
Identity = 122/180 (67.78%), Postives = 165/180 (91.67%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIANK-LRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 537
            MKT+L++R ++IP+ +++ +K+R VTVKGPRGEL+++FKH+++D++K+ +K +RVD+WF  R+QLAC+RTICSH++NM  GVT+G+LYKMRF Y+HFPINV++SG TVEIRNFLGEKRVR+V+L EGV+Y+R+ADVKDQIELSGNDI AVS+TAARIQQ+T+++ KD+RKFLDGIYVSEK
Sbjct:    1 MKTVLASRSIEIPEGIDVTIKARNVTVKGPRGELTRNFKHIDMDLKKVGSKFIRVDVWFATRQQLACVRTICSHIDNMFVGVTQGFLYKMRFVYSHFPINVALSGNTVEIRNFLGEKRVRKVELLEGVNYVRSADVKDQIELSGNDIAAVSLTAARIQQATNIRHKDLRKFLDGIYVSEK 180
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: W7TGP7_9STRA (60s ribosomal protein l9 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGP7_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.310e-85
Identity = 129/191 (67.54%), Postives = 161/191 (84.29%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIAN---------KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNI 546
            MK +L+T+ V+IP+ V L +KSR VTVKGPRGELS++FKHLN+  + +           KL+VDLWF NRKQLA IRT+CSH+EN++TGVTKG+LY+MRF YAHFPINVS++ +TVE+RNFLGEKRVRRV+L  GV+Y+R++DVKDQIEL GND+ AVS+TAARIQQ T+VKRKDIRKFLDGIYVS+K +I
Sbjct:    1 MKLILATKIVNIPEGVTLHIKSRHVTVKGPRGELSRAFKHLNIAFELVGGNKDKGTNPKKLKVDLWFANRKQLATIRTVCSHIENLMTGVTKGFLYRMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRSSDVKDQIELKGNDLTAVSLTAARIQQCTTVKRKDIRKFLDGIYVSQKTHI 191
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A7S1BA91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BA91_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.510e-85
Identity = 127/180 (70.56%), Postives = 159/180 (88.33%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKI-ANKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 537
            MKT LS++ + IPD V +DV  R+VTVKGPRG L+Q+FKH+N+DI+K+ A  LRV+LW+  RKQLAC+RTICSH+ENM+TGVT+G++YKMRF Y+HFPINV++SG  VEIRNFLGEKRVR+VQL  GV ++RTADVKDQIELSGNDI AVS+T A+IQQ+T+V++KD+RKFLDGIYVSEK
Sbjct:    2 MKTKLSSQSLAIPDGVEVDVSCRVVTVKGPRGSLTQAFKHVNMDIRKLNAKYLRVELWWATRKQLACVRTICSHIENMMTGVTRGFIYKMRFVYSHFPINVNLSGENVEIRNFLGEKRVRKVQLLPGVTFVRTADVKDQIELSGNDINAVSLTCAQIQQATNVRKKDLRKFLDGIYVSEK 181
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A7R9W890_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W890_9STRA)

HSP 1 Score: 266 bits (680), Expect = 4.430e-85
Identity = 124/183 (67.76%), Postives = 157/183 (85.79%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIANK-LRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNI 546
            MKT+L++R ++IPD V  +V +R VT+KGPRG L++ FKH+++D++K+  K +RVD+WF NRKQLAC+RTICSH+ENM  GVT+G+ YKMRF Y+HFPINVS++G+TVEIRNFLGEKRVR+V+L +GV Y+RTADVKDQIELSGNDI  VS+TAARIQQ T+   KD+RKFLDGIYVSEK  I
Sbjct:    3 MKTVLASRTIEIPDGVEFEVTARKVTIKGPRGTLTREFKHIDMDLRKVGKKFVRVDIWFANRKQLACVRTICSHIENMFVGVTQGFCYKMRFVYSHFPINVSLNGKTVEIRNFLGEKRVRKVELCDGVQYVRTADVKDQIELSGNDIAMVSLTAARIQQCTNTTNKDLRKFLDGIYVSEKGKI 185
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A7R9YBB6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBB6_9STRA)

HSP 1 Score: 266 bits (679), Expect = 6.060e-85
Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKI-ANKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIAQE 555
            M+ +LS+R V IP+ V ++ K R VTV GPRGEL++ F HL +D+Q + A+ L+VDLWFG  KQ ACIRT+CSH+ENMITGVTKG+LYKMRFCYAHFPI V+I GR VEIRNFLGEKRVR+V L EGVD LRT  VKDQIELSGNDI AVS+TAARIQQ+T V+ KDIRKFLDGIYVSEK  I Q+
Sbjct:    1 MRQILSSRLVSIPEGVTVEAKCRTVTVSGPRGELTRKFGHLKVDMQLVSADTLKVDLWFGTLKQRACIRTVCSHIENMITGVTKGFLYKMRFCYAHFPIIVAIEGRNVEIRNFLGEKRVRKVALMEGVDALRTESVKDQIELSGNDIVAVSLTAARIQQATRVRNKDIRKFLDGIYVSEKGTIVQD 186
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A7S1U0E8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0E8_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.150e-83
Identity = 131/183 (71.58%), Postives = 154/183 (84.15%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIAN-KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNI 546
            M+ +L+TR V IP+ V ++ K R VTV GPRG L++ F HLN+D+QKI++ +L+VDLWFG  KQ ACIRT+CSHVENMITGVTKG+LYKMRFCYAHFPI V+I  R VEIRNFLGEKRVRRV L +GVD +RT +VKDQIELSGNDI AVS+TAARIQQ+T V+ KDIRKFLDGIYVSEK  I
Sbjct:   14 MRQILATRSVAIPEGVTVEAKCRTVTVTGPRGSLTRKFGHLNVDMQKISDSELKVDLWFGTLKQRACIRTVCSHVENMITGVTKGFLYKMRFCYAHFPIIVAIEQRNVEIRNFLGEKRVRRVALLDGVDAVRTDNVKDQIELSGNDIVAVSLTAARIQQATRVRNKDIRKFLDGIYVSEKTTI 196
[Close]
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Match: A0A6U3WAV7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3WAV7_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.080e-82
Identity = 121/180 (67.22%), Postives = 157/180 (87.22%), Query Frame = 1 
Query:    1 MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIA-NKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEK 537
            MKT+L++R + IP+ V++ + +R VTV GPRG LS+ FKH+ +D++KI  + +RVD+WF  RKQLAC+RTICSH++NM+ GVT+G+LYKMRF Y+HFPINVS+SG TVEIRNFLGEKRVR+V+L EGV Y+R+ADVKDQIEL+GNDI  VS+TAA+IQQ+T+V+ KD+RKFLDGIYVSEK
Sbjct:    1 MKTVLASRTIAIPEGVDVSINARSVTVTGPRGTLSRDFKHIQMDLKKIGKSSIRVDIWFATRKQLACVRTICSHIDNMMVGVTQGFLYKMRFVYSHFPINVSLSGNTVEIRNFLGEKRVRKVELLEGVKYVRSADVKDQIELAGNDIALVSLTAAKIQQATNVRHKDLRKFLDGIYVSEK 180
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1181.1447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC26_ECTSI6.780e-11087.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAK5_9STRA6.660e-9574.87Ribosomal protein L6, alpha-beta domain-containing... [more]
A0A7S2XV97_9STRA1.370e-9176.11Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2GU27_9STRA2.480e-8667.78Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
W7TGP7_9STRA1.310e-8567.5460s ribosomal protein l9 n=2 Tax=Monodopsidaceae T... [more]
A0A7S1BA91_9STRA1.510e-8570.56Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7R9W890_9STRA4.430e-8567.76Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7R9YBB6_9STRA6.060e-8570.97Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U0E8_9STRA2.150e-8371.58Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6U3WAV7_9STRA1.080e-8267.22Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1181contigF-serratus_M_contig1181:60501..65931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score331.6
Seed ortholog evalue2.3e-88
Seed eggNOG ortholog2880.D8LC26
Preferred nameRPL9
KEGG koko:K02940
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0002181,GO:0003002,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007389,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009719,GO:0009892,GO:0009941,GO:0009955,GO:0009987,GO:0010033,GO:0010259,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016020,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0022625,GO:0022626,GO:0030054,GO:0031090,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042221,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0048856,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055044,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070848,GO:0070887,GO:0070972,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990089,GO:1990090,GO:1990904
EggNOG free text desc.rRNA binding
EggNOG OGsCOG0097@1,KOG3255@2759
Ec32 ortholog descriptionRibosomal protein L6, alpha-beta domain
Ec32 orthologEc-20_004190.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons5
Model size1220
Cds size570
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1181.1447.1prot_F-serratus_M_contig1181.1447.1Fucus serratus malepolypeptideF-serratus_M_contig1181 61183..65931 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929080.8265285-UTR-F-serratus_M_contig1181:60500..609671622929080.8265285-UTR-F-serratus_M_contig1181:60500..60967Fucus serratus maleUTRF-serratus_M_contig1181 60501..60967 -
1690962696.9815564-UTR-F-serratus_M_contig1181:60500..609671690962696.9815564-UTR-F-serratus_M_contig1181:60500..60967Fucus serratus maleUTRF-serratus_M_contig1181 60501..60967 -
1622929080.8401592-UTR-F-serratus_M_contig1181:60999..611821622929080.8401592-UTR-F-serratus_M_contig1181:60999..61182Fucus serratus maleUTRF-serratus_M_contig1181 61000..61182 -
1690962696.9920878-UTR-F-serratus_M_contig1181:60999..611821690962696.9920878-UTR-F-serratus_M_contig1181:60999..61182Fucus serratus maleUTRF-serratus_M_contig1181 61000..61182 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929080.8551118-CDS-F-serratus_M_contig1181:61182..612951622929080.8551118-CDS-F-serratus_M_contig1181:61182..61295Fucus serratus maleCDSF-serratus_M_contig1181 61183..61295 -
1690962696.9999537-CDS-F-serratus_M_contig1181:61182..612951690962696.9999537-CDS-F-serratus_M_contig1181:61182..61295Fucus serratus maleCDSF-serratus_M_contig1181 61183..61295 -
1622929081.33886-CDS-F-serratus_M_contig1181:61981..620791622929081.33886-CDS-F-serratus_M_contig1181:61981..62079Fucus serratus maleCDSF-serratus_M_contig1181 61982..62079 -
1690962697.0078607-CDS-F-serratus_M_contig1181:61981..620791690962697.0078607-CDS-F-serratus_M_contig1181:61981..62079Fucus serratus maleCDSF-serratus_M_contig1181 61982..62079 -
1622929081.3563437-CDS-F-serratus_M_contig1181:62516..626861622929081.3563437-CDS-F-serratus_M_contig1181:62516..62686Fucus serratus maleCDSF-serratus_M_contig1181 62517..62686 -
1690962697.0157428-CDS-F-serratus_M_contig1181:62516..626861690962697.0157428-CDS-F-serratus_M_contig1181:62516..62686Fucus serratus maleCDSF-serratus_M_contig1181 62517..62686 -
1622929081.3671927-CDS-F-serratus_M_contig1181:65742..659311622929081.3671927-CDS-F-serratus_M_contig1181:65742..65931Fucus serratus maleCDSF-serratus_M_contig1181 65743..65931 -
1690962697.023661-CDS-F-serratus_M_contig1181:65742..659311690962697.023661-CDS-F-serratus_M_contig1181:65742..65931Fucus serratus maleCDSF-serratus_M_contig1181 65743..65931 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1181.1447.1

>prot_F-serratus_M_contig1181.1447.1 ID=prot_F-serratus_M_contig1181.1447.1|Name=mRNA_F-serratus_M_contig1181.1447.1|organism=Fucus serratus male|type=polypeptide|length=190bp
MKTLLSTRFVDIPDEVNLDVKSRIVTVKGPRGELSQSFKHLNLDIQKIAN
KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINV
SISGRTVEIRNFLGEKRVRRVQLAEGVDYLRTADVKDQIELSGNDIKAVS
MTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIAQEAEEE*
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mRNA from alignment at F-serratus_M_contig1181:60501..65931-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1181.1447.1 ID=mRNA_F-serratus_M_contig1181.1447.1|Name=mRNA_F-serratus_M_contig1181.1447.1|organism=Fucus serratus male|type=mRNA|length=5431bp|location=Sequence derived from alignment at F-serratus_M_contig1181:60501..65931- (Fucus serratus male)
ATGAAGACTCTGCTGTCCACGCGCTTCGTCGACATCCCGGATGAAGTCAA
TCTCGATGTCAAGTCTCGGATCGTGACGGTGAAAGGCCCGAGGGGCGAGC
TCAGCCAGAGCTTTAAGCACCTCAACCTCGACATCCAGAAGATTGCCAAT
AAGCTGCGGGTGGACCTGTGGTTCGGGAACCGTAAGCAGGTTAGTTCGGC
GGGTAGGGGAGTGGGAGCTTCTCTTTGCACCCTATTGTGACCTAATTTTT
CTACGGTTTCGGTGATACGAGAGGCTCAATGACCTTTCATCATGGAAGCC
TAGAGTAGCCATATTAGGGCAAGAGGCGCCGCCGTGTGGCCTGTATTTCT
CTATCACAGCAGTAATAGCGTCGCAGTATGCATCGCATGCACTCTATAAT
TTAGAGTAGTACGGCAGTATCTGAAAGTCTACAAAGTTAACAGCAGTTGT
TGATACTCTGTACTCCGACTGAACAACGCCCAGCAATTCCAGCGGTCGTA
GTTTGCCCTCATTACATACCAGTACAATTTTTACGGCCATCGCGCAATCC
ACAATCATTTAGAGTTTGTATATCTAACAAGTAGTCGATGGCACTCTCTA
CACTCCTTTGCGCTCAACACATTCAATTTTACGGCCACTCGGCAAACCAC
AATCATTTTTTTTAATCTTGTGTCTCTCGTGTTCTCTACAGCCACTACTT
CCATCCCTCTCCTCCTCCCATTACTCCTACGAGTAGGACCTTCTCTTTCT
TGAAAGCTTCTCGGTTCATCAATGTCCACCCTTAACGTACCAAAAGTTGA
AACTAAATACTTTTTAGTATATACCAGCACTCTGTATTAGGGATAGTCTA
TATTGCTATAATACTAATAATACTGCATTAGCTCTCTACTCCAACTACGG
TCTTATTGAGAGACAAATACAAAAGTGAACGAAGTCCAACCAAGTTTTTT
TCCCTCTATATACCAGCGTACATTCCGAGATACCTGGTAGTTCCTACCAC
CAAAATATCAGTATTTCGTGGACATACCGGTGTCTACATCTGTCAGTTTG
GTAGAACAAATCTGTAGCACGATTAGTAAATGGTAAATGGTAGTCCCTGC
ATGGAGATTAATGTAAATTTCAACGGTGGGTTTCTCCCCGACATTATATT
GTTGACCCAATGTTATCTACATTGGGGAACCTGTTTAAAGAGGTTTTTGT
CAAACATAAACGTTTTGACCACTGCTGTCTAGGTGCTGTTCGTCTTTAAA
AACATACACCACTGCTGTACCGTCTGTGCTCATACGACAGCAAAGTGGTA
TTAGCTATAGGCCCTCTTTGACGACCTTTTTTTGTCTCGTCTCCTCCCCA
CCCACCCTCCAAAAAATGATAAAAAGAGGCGTTCCCAGAGCCAATCCCAC
CCAAACGTTTTGACAATCTTCTCTCCGTGATTGGGTGGATACTCAGAAGG
CTTAGATGCGTTCATCGTCGATTCGACCAGAGTTTCTCTCTCCCAACCTC
GCAGATTCGCGTCGAAATCACCTCTGACCAAAAAGTTTTATCAATCCCTA
CGCTTACATGAATAGTGTGTCGTTTTCGATACCTTAGATGCGTTCACATA
TTTCTTTCAAGTCGATTCGACCAGAGTTTTTCTCTTCCAACCTCGCAGAT
TCGCGTCGAAAACACTTCTGACCAAAACGTTTTGTCAATCTTTGCTCCAA
CATGAGGAGTGTTGTTTTAGATACCGCACACGCCCACGTGACTCGAGTTA
CCTTGAGGGCTATTGACCCTGTGCCCGCAGACTCGAGGCGGTGAACGCTA
TCGGTAAGCAATTGCGTGACGTTATACACTCAGGACTGACTCGGTGGCGG
TTGGCAATTTAAGGGGACACCGTAGCGGGAGGCGTCCCGTGGGTAAGCAC
CAGATTCAATCTAGGTGTGGAGAATGATTGGACTGACGCTCTGGGACAGG
GAAAAAAGCCATGCCCCTGTACGAAGGGTTGGGAACCTTACCCGGCCAAT
GTCTCATGTTTTGAACGTCATGACCACATGTAGGGACAGAGCAACCGTAC
ATCATGTCCCCCCAAAAGTCTCGTGGTGTTGCTGCAGTACACGCTGCTCG
CTTCGGCCATAGTCCCCGTGACGTTACGTTACGTCTTGGGAGGAAACACG
CTGGCGGTTATAACGCCGACTCTAGCAGCCTCTCTTTTCCGGGTGGGGAG
GTAGCGGGCAGTGACGAAGTTCGATGCAGCCAGAGGCCGTCGACTGTAAA
CACGGGTTCCATTTATCGAAATGTTTTTTCGGCGGGAAACTTTGACGTAT
TTTTTATGTCGAATGGAGTCGAGCACGTAAAAATCCCTTCCGTGTCTCCT
ATCAGTATCTAATTCATCATGTTATTCAAAAAAATAAAAATGGGGTTATG
TTTTGTTGGGAGTAGAACCATGATATAATAGTAGTGGTTGTGGTACAGGA
GACCCTCGATCTCTTCGCCCTCCACTCTTGAGGTTGCAGGTGTGGACGCC
CCCAAAGTATTATGTGCTAGTTGCACATGATTTTCCGTTTTTGTTTCTCT
ACGAGTACGATGCAGTTCGAGTGTCGAACGTTTAGTGGCTGTCTTCCCAA
AGCCACCCTCCTTGAAACATCCGCGTCTCCTTCCGATTTTCCTTTCCATC
ATCCCCAACCACCAGTACTTTGTATAGGTATTAATAGCAACCTTACACGG
GAGACTTCAGGTTGGCGTACCAACTACATGTACAGTAAGACCGGTCCTAA
GATGCTGGATCTTTTGGGGGAACTCAGACAGGGTCTCGGGGACTCCTATT
TTTTTTTTTGGTAGGCAGCAACTTGTGTATTTTTAGTCAACTAAACACAA
AAGGATATCGCCCTTAAACAGAATTGGATGTCGTAAGAGCTGGGTGCTGT
GCAGCCAGCGTCTTCCTCGGGCGCTGATTTGCTCCAACAGCCCAGAGGAT
AAAACACCCTTGACCTCTTCATGGCACCTAATAATCTTGTGCGGAGTATA
ATTCTATTTTACCGTCCTGTAGGTTTCACTCGACGTTATCGCTCTCAGTT
CCGATCCCTTATATTGCTTCTGTGTCACTCTTTCTCACGGCTATATCATC
TTTGATAAAAGAAAATCGAGCGAGAAGTGTAAAACTGAACGTATTTCTCT
CTCTCGCCCAACCCTGAAACCGCATTGTCGACCCTCCACCCCCATCCCCA
TGCCATCTCCACCCCTCCAAAACGTTCGACGTCGACGGAGAACAGCTTGC
CTGCATCCGCACGATCTGCTCCCACGTGGAAAACATGATCACCGGCGTGA
CGAAGGGCTACCTTTATAAGATGCGCTTCTGTTACGCCCATTTCCCCATC
AACGTTTCCATCTCTGGCCGAACGGTGGAGATCCGGAACTTCCTTGGCGA
AAAGCGCGTGCGCAGGTATGTATGCAACATAGGAAAACGCCTCTTTTTCA
ATCGAAACATTTGTGGGGCTGCTCGCTCCTCCCACCTTCCCCTTGACATC
TTGAAAGAGTAGGCGAGTGCAATCGCTGCTCTGGAAAAAAAAATTATACT
GATGTGTATGTGTTCGTCGTCCCGTGCACGGGAAGTTGAATCTCGGGGGG
AGCGAGACCTGCGGCAAAGGCTTTCCACAATGCCAAAGTGCATCTTACCG
ACGGAAAAACCTCTGCGGGCTTTGTGACGGCAACACCGTCCCTGTAGCAT
GCATATCTTGCCACTGATTTGTTTTTCCTTCCGCCTTGACCCTTCTCGCC
GTCCGCCTGCGTGTCCCGCCTGCCTGCCGGCGTTTAAACATGGACAACGA
ATGGTGTCATTTCTCACGACTATGACCATGTCTTGGTGTGTGTCCTCTGT
AGGGTGCAGCTTGCTGAAGGCGTGGACTACCTGCGTACAGCTGACGTGAA
GGACCAGATCGAACTGAGCGGTAACGATATCAAGGCCGTTTCCATGACGG
GTGAGTGGGCCTCGCTTTTTGTCTGGGTGGTGGGGGTTTTCGGTGAGATG
GAGGCCAATCCCGTTAGTCGGGGACGACGAGAAGCTGTTCACGACACTCG
CGATGCTGTGTGGCAAAATTGCGTCTCTCGCTTCCAACTGTACTATCATA
CCATAGAAAAGCTCACAGGTCTTGCTCTTACTTAAGGTGTACAGGAGGTC
GGCATCGGAAGAGGGCCCATCCCGTACCCTCGATTCTCGTCGGATCACTT
TACTCGCACAGGATAATCAAACACAACTTTAGTGCATGATCTTTCCAGAA
AGCAGCCGTAGAGAAAGACTACCGAACCCATATTATCGGGGAAGGTTTGT
GCTGACCGCCTCTCTTTATACAAGTTGTGTCGCCCAGTGGCTGAACGACT
GCGATATATACGTAGTTATTGAGTGTGCGTCATGCATTTATGACGTATGA
GCTGTAAAAAATTGAGCACCGCTACCCATTCCTTTGAGTGTGGGAGATGG
CGGCGATGTGGTAGGATTCACCTTCCCCTTACGAACACTCTCTTGTTACG
GTATGGTGGAAAATAAATACGCTCCACAGCACAATGCACTCCCCCTTCTC
CCTTGCTTGAATGACCATTCCCTTTCTTTTCCGCTTGCCGTCCCCGTGTC
TCATTGTATCATCTGGGTGGTGCACAAAATCATTAGCGGCGCGCATCCAG
CAGTCCACGTCCGTCAAGCGGAAGGATATCCGTAAGTTCCTCGACGGTAT
CTATGTTAGCGAGAAGCTGAACATCGCCCAAGAGGCTGAGGAGGAGTGAG
AGCACGACACCGCAAGGATTGCCTCCCCTCCCAAAGAATCCTCTCGTTGC
GATCTCCCCCGTGGGATTGTTTGACCGTGAGGGCGCGGTTAGTGACTTGA
GGCACGGGTCGGCTGGAGATACTTCCAGGCGTTTTTGTTGCTGTCGCTTA
CGCTGAGCTGTTGTGAAGGGGGGAGAGGGCGGGCGGCTGGTTTGTTATCT
GCACAAATAATCAGCGCGGATGGTGGTGCTGCGGAGCAGTAAAGAACGAA
AGATTAATCGACACAAATATTCGGGATGAATCACGTTTTTTATATTATCG
CGCTCTTCCATGCTCTACGGGGAGATGTACGCGCTGCTGAATATCACGTC
CATTTTTTTTAAACCCCCTTGAGACGCGCAAAGAGGCAAAAAGTAGCATC
CCACGCAGGGGGAATAATGTCAAAGCGCTTAGGTGGGTTCATAGGCTGCA
AAGGCAGAACATCATCGTTGTTGTTTGACACATTCAGCGTTTTGTCCTTG
CAACTGAAAAAACTACGGCGAAACAACAAGTCAGCCATAGACCTATCAAA
TGCCAATCCCGCTTGTGGTCAGAAAGAGGTACCAAGGTCAACGGGTCACA
TCATGGTGACAACCCGCTACTCAGACCAACAGGAATCCAACAAGCGACAA
AACGTTATGCGGCTCTACAAGTAATGGCACC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1181:60501..65931-

>mRNA_F-serratus_M_contig1181.1447.1 ID=mRNA_F-serratus_M_contig1181.1447.1|Name=mRNA_F-serratus_M_contig1181.1447.1|organism=Fucus serratus male|type=CDS|length=1140bp|location=Sequence derived from alignment at F-serratus_M_contig1181:60501..65931- (Fucus serratus male)
ATGAAGACTCTGCTGTCCACGCGCTTCGTCGACATCCCGGATGAAGTCAA
TCTCGATGTCAAGTCTCGGATCGTGACGGTGAAAGGCCCGAGGGGCGAGC
TCAGCCAGAGCTTTAAGCACCTCAACCTCGACATCCAGAAGATTGCCAAT
AAGCTGCGGGTGGACCTGTGGTTCGGGAACCGTAAGCAGATGAAGACTCT
GCTGTCCACGCGCTTCGTCGACATCCCGGATGAAGTCAATCTCGATGTCA
AGTCTCGGATCGTGACGGTGAAAGGCCCGAGGGGCGAGCTCAGCCAGAGC
TTTAAGCACCTCAACCTCGACATCCAGAAGATTGCCAATAAGCTGCGGGT
GGACCTGTGGTTCGGGAACCGTAAGCAGCTTGCCTGCATCCGCACGATCT
GCTCCCACGTGGAAAACATGATCACCGGCGTGACGAAGGGCTACCTTTAT
AAGATGCGCTTCTGTTACGCCCATTTCCCCATCAACGTTTCCATCTCTGG
CCGAACGGTGGAGATCCGGAACTTCCTTGGCGAAAAGCGCGTGCGCAGCT
TGCCTGCATCCGCACGATCTGCTCCCACGTGGAAAACATGATCACCGGCG
TGACGAAGGGCTACCTTTATAAGATGCGCTTCTGTTACGCCCATTTCCCC
ATCAACGTTTCCATCTCTGGCCGAACGGTGGAGATCCGGAACTTCCTTGG
CGAAAAGCGCGTGCGCAGGGTGCAGCTTGCTGAAGGCGTGGACTACCTGC
GTACAGCTGACGTGAAGGACCAGATCGAACTGAGCGGTAACGATATCAAG
GCCGTTTCCATGACGGGGTGCAGCTTGCTGAAGGCGTGGACTACCTGCGT
ACAGCTGACGTGAAGGACCAGATCGAACTGAGCGGTAACGATATCAAGGC
CGTTTCCATGACGGCGGCGCGCATCCAGCAGTCCACGTCCGTCAAGCGGA
AGGATATCCGTAAGTTCCTCGACGGTATCTATGTTAGCGAGAAGCTGAAC
ATCGCCCAAGAGGCTGAGGAGGAGTGACGGCGCGCATCCAGCAGTCCACG
TCCGTCAAGCGGAAGGATATCCGTAAGTTCCTCGACGGTATCTATGTTAG
CGAGAAGCTGAACATCGCCCAAGAGGCTGAGGAGGAGTGA
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