prot_F-serratus_M_contig1178.1433.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1178.1433.1
Unique Name	prot_F-serratus_M_contig1178.1433.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	136

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.940e-28
Identity = 63/132 (47.73%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR +IA A RAVAR+C +    H +A + IL Y+V T   GIT+G G    L ME + D+D  +    RRSVSG  +M  +G ISW SR Q+     T++AEYV+L++V+KEV+FL+QV  FM P 
Sbjct:   80 MWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPE 211

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.250e-27
Identity = 62/132 (46.97%), Postives = 85/132 (64.39%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H +A + IL Y+V T   GIT+  G    L ME + D+D  +    RRSVSG ++M   G +SW SR Q+     T++AEYV+L++V+KEV+FL+QV+ F+ P 
Sbjct:   41 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPE 172

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.370e-27
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H +A + IL Y+V T   GIT+  G    L ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T++AEYV+L++V+KEV+FL+QV  FM P 
Sbjct:  124 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPE 255

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.230e-27
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H +A + IL Y+V T   GIT+  G    L ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T++AEYV+L++V+KEV+FL+QV  FM P 
Sbjct:  225 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPE 356

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.390e-27
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H +A + IL Y+V T   GIT+  G    L ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T++AEYV+L++V+KEV+FL+QV  FM P 
Sbjct:  166 MWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPE 297

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 9.090e-27
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H +A + IL Y+V T   GIT+  G    L ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T++AEYV+L++V+KEV+FL+QV  FM P 
Sbjct:  399 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPE 530

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.040e-26
Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITY-GGQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA A RAVAR+C +    H KA + IL Y+  T   GIT+ GG    + M+ + D+D  +    RRSVSG ++M   G ++W SR Q+     T++AEYVA+++V+KEV+FL+QV  F+ P 
Sbjct:  115 MWLATQTRPDIADAARAVARYCPSPKMVHWKAALGILGYVRRTSWMGITFEGGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLRQVWRFILPD 246

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.100e-26
Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H +A + IL Y+V T   GIT+  G    L ME + D+D  +    RRSVSG ++M   G ISW SR Q+     T++AEYV+L++V+KEV+FL+QV  FM P 
Sbjct:  920 MWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPE 1051

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.810e-26
Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPS 131
            MW AT TR DIA AVRAVAR+C +    H KA + IL Y+  T   GIT+  G    + M+ + D+D  +    RRSVSG ++M   G ++W SR Q+     T++AEYVA+++V+KEV+FL+QV  FM P 
Sbjct:  108 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPD 239

[Close]

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.260e-26
Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = 0

Query:    1 MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYGGQGCE-LCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSM 132
            MW AT TR DIA AVRAVAR+C +    H  A M IL Y   T  +GI++     E   ++ Y D+D  +    RRSVSG ++    GA+SW SR Q+     T++AEYVAL EV+K ++FL+Q+  FM P +
Sbjct:    3 MWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQV 135

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KD60_9PHAE	1.940e-28	47.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTK6_9PHAE	1.250e-27	46.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KR24_9PHAE	1.370e-27	48.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JLN0_9PHAE	3.230e-27	48.48	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5L0Z9_9PHAE	4.390e-27	48.48	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KQB8_9PHAE	9.090e-27	48.48	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K2P8_9PHAE	1.040e-26	44.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K2R1_9PHAE	1.100e-26	48.48	Integrase catalytic domain-containing protein n=3 ...	[more]
A0A6H5KP70_9PHAE	1.810e-26	45.45	Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEZ8_9PHAE	2.260e-26	44.36	Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF275		coord: 5..124
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 5..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1178	contig	F-serratus_M_contig1178:103024..103431 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1178.1433.1	mRNA_F-serratus_M_contig1178.1433.1	Fucus serratus male	mRNA	F-serratus_M_contig1178 102820..103455 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1178.1433.1 ID=prot_F-serratus_M_contig1178.1433.1|Name=mRNA_F-serratus_M_contig1178.1433.1|organism=Fucus serratus male|type=polypeptide|length=136bp
MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITY
GGQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETA
SGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039537	Retrotran_Ty1/copia-like