mRNA_F-serratus_M_contig1003.143.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 265 bits (676), Expect = 3.020e-86 Identity = 144/226 (63.72%), Postives = 164/226 (72.57%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 LRPNNGSII+QR IL LDDFKCH+ + FIA L + ANTIVI IPGG T LLQPLDRMLNK+MKRL+R KYTA +A+A AD +GKLKPP GVVST CK++WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q A HPDVT PPL LP VP G +NPIT A KEV+ KLLP ESD +VE+SE GGG A+G+ Sbjct: 26 LRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVSEXXXXXXXXXXQGGGDAEGE 249
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 260 bits (664), Expect = 5.310e-84 Identity = 139/225 (61.78%), Postives = 165/225 (73.33%), Query Frame = 1 Query: 4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 RPNNGSI++QRP IL LDDFKC +D+ FIA L + ANTI I IPGGLT LLQPLDR+LNK+MKR++R KYTA +A+A AD +GKLKPP GVVST C E+WE I P+ VKTC KI GL LALDG EDHAW HNF E YR+LL +Q A HPD T PPL LP VP G NPIT A KEV+ KL+P ES +VE+ E DS+VE+++ GGGGA+G+ Sbjct: 27 RPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVP-GGFDFNPITGAQKEVEEKLMPY-VADESASEVEVLEGDSDVEVVEGQGGGGAEGE 249
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 266 bits (680), Expect = 5.340e-84 Identity = 144/226 (63.72%), Postives = 164/226 (72.57%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI IPG LT LLQPLDRMLNK+MKRL+R KYTA +A+A AD +GKLKPP GVVST CKE+WE TP+ VKTC I GL LALDGSEDHAWC HNF E YR+LL +QR A H DVT PPL LP VP G +NPIT A KEV+ KLLP ESD +VE+ E GGGGA+G+ Sbjct: 242 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 266 bits (680), Expect = 3.990e-82 Identity = 142/225 (63.11%), Postives = 163/225 (72.44%), Query Frame = 1 Query: 4 RPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKGD 678 RPNNGSI++QRP IL LDDF+CH+D+ FIA L + NTIVI IPGGLT L PLDRMLNK+MKRL+R KYTA +A+A AD +GKLKPP GVVST CKE+WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q A HPDVT PPL LP VP G +NPIT A KEV+ KLLP ESD +VE+ E GGGGA+G+ Sbjct: 417 RPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEGE 639
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 256 bits (654), Expect = 1.420e-81 Identity = 139/225 (61.78%), Postives = 161/225 (71.56%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSEDDSNVELLDAPGGGGAKG 675 LRPNNGSI++QRP IL LDD KCH+ + FIA L + ANT+VI IPGGLT LLQPLDRMLNK+MKRL+R KYTA + +A AD +GKLKPP GVVST CKE+WE ITP+ VK+C KI GL LALDGSEDHAWC H+F E +LL +Q A HPDVT PPL LP VP G +NPIT A KEV+ KLLP ESD +VE+ E GGGGA+G Sbjct: 123 LRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPY-VADESDSEVEVLEGXXXXXXXXXQGGGGAEG 345
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.930e-79 Identity = 129/193 (66.84%), Postives = 149/193 (77.20%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPS 579 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTIVI IPGGLT LLQPLD LNK+MKRL+R K+TA +++A AD +GKLKPP G+VST CKE WE ITP+ VKTC KI GL LALDGSEDHAWC HNF E YR+LL +Q A HP+VT PPL LP VP G +NPIT A KEV+ KLLP+ Sbjct: 87 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP-GGFDSNPITAAQKEVEGKLLPT 276
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 257 bits (656), Expect = 3.110e-79 Identity = 134/207 (64.73%), Postives = 153/207 (73.91%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621 LRPNNGS+++QR IL LDDFKCH+D FIA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R YTA TA A DP TGKL PPG G V+T CK +W ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE A HP+VT PPL LP VP + N I A KE++A LLP G D D+E+ + Sbjct: 355 LRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST-ANHIEAAAKELEAGLLPRG----DDSDIEIED 556
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 256 bits (653), Expect = 1.020e-78 Identity = 134/207 (64.73%), Postives = 152/207 (73.43%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621 LRPNNGSI++QR IL LDDFKCH+D FIA L + ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R YTA TA A DP TGKL PPG G V+T CK +W ITP+ KTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE A HP+VT PPL LP VP + N I A KE++A LLP G D D+E+ + Sbjct: 362 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAEST-ANHIEAAAKELEAGLLPRG----DDSDIEIED 563
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 245 bits (626), Expect = 3.250e-78 Identity = 125/184 (67.93%), Postives = 142/184 (77.17%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADK 552 LRPNNGSI++QRP IL LDDFKCH+D+ FIA L + ANTI+I IPGG+T LLQPLDR+LNK+MKRL+R KYTA +A+A AD +GKLKPP GVVST CKE+WE ITP+ VKTC I L LALDGSEDHAWC HNF E YR+LL +Q R A HPDVT PPL LP VP G NPIT A K Sbjct: 103 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHAWCEHNFGEDYRDLLGEQHAVRLAEHPDVTLPPLKLPKVP-GRFDPNPITAAQK 285
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.210e-77 Identity = 134/207 (64.73%), Postives = 151/207 (72.95%), Query Frame = 1 Query: 1 LRPNNGSIIKQRPSILALDDFKCHRDKAFIADLLKRANTIVILIPGGLTSLLQPLDRMLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITPDVVKTCLKIWGLPLALDGSEDHAWCVHNFCEGYRELL*QQRVEREAAHPDVTHPPLYLPAVPEGAIITNPITTADKEVDAKLLPSGTGWESDRDVELSE 621 LRPNNGSI++QR IL LDDFKCH+D FIA L K ANTIVI IPGGLT LLQPLDRMLNK+MKRL+R YTA TA A DP TG L PPG G V+T CK +W ITP+ VKTC KI GL LALDGSEDHAWC+HNF +GYRELL QQRVE A HP+VT P L LP VP + N I A KE++A LLP G D D+E+ + Sbjct: 392 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAEST-ANHIEAAAKELEAGLLPCG----DDSDIEIED 593 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1003.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1003.143.1 >prot_F-serratus_M_contig1003.143.1 ID=prot_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=polypeptide|length=89bp MLNKRMKRLMRTKYTALTATATADPTTGKLKPPGNGVVSTGCKESWEIITback to top mRNA from alignment at F-serratus_M_contig1003:169093..169773- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=mRNA|length=681bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1003:169093..169773- >mRNA_F-serratus_M_contig1003.143.1 ID=mRNA_F-serratus_M_contig1003.143.1|Name=mRNA_F-serratus_M_contig1003.143.1|organism=Fucus serratus male|type=CDS|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig1003:169093..169773- (Fucus serratus male)back to top |