mRNA_F-serratus_M_contig117.1407.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE) HSP 1 Score: 314 bits (805), Expect = 3.340e-102 Identity = 169/293 (57.68%), Postives = 202/293 (68.94%), Query Frame = 1
Query: 130 PNRHTMAMSAARREVVTLDCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPG-VCEQALLDTFQASIKRRSQESPCFGAGVMSSEEWWAGVVRTAFLGAGVPEETL----EG----------------VFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGAR---KADGVGVHIGDSFGKDVLGARGVGWDSFLVTQ-KGPSDDEKN--VRHIRVRELTDVPVALGIAR 927
P+ + A +VV LDCTGTIMRIKGS+ RLYLGVLE+RLG+ EGG+P V EQ LL++F+AS+KRRS+E PCFG GVMSSE+WWA VV F GAGV +ETL EG VFD+ FT AWELVPGA+ V+ DLRAW E GGP ALGAVSNFDERLHPLL+NLGVY+ FDFVLTSRECGS+KP+PH+F EALKRAG+ DG GV +GD+F DVLGAR VGWD+ L+T+ K P+ +E+ + RV +L VP ALG R
Sbjct: 25 PSTRRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGRVFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAVSNFDERLHPLLKNLGVYESFDFVLTSRECGSEKPEPHMFHEALKRAGSSGGGDGDGRGVIVGDTFRTDVLGARSVGWDAVLITRGKDPATEEEQDTTHYARVDDLRGVPAALGRGR 317
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT) HSP 1 Score: 154 bits (389), Expect = 6.280e-40 Identity = 101/283 (35.69%), Postives = 132/283 (46.64%), Query Frame = 1
Query: 151 MSAARREVVTLDCTGTIMRIKGSISRLYLGVLEERLGIE-----------EGGIPGVCEQALLDTFQASIKRRSQESPCFGAGVMSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAW-CQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKAD---GVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDE------------KNVRHIRVRELTDVPVALG 918
++A R +VT D TGT+MR++ + +Y L L E V A+ F + + PCFGAG +SS +WW+ VVR AF+GAGV E + F WEL+ + GV+ L W Q G L +G +SNFD+RL LL +LG+ FDFVLTSRE G +KP IF A +RAG D VH+GD+FG DVLGA GW + V SDD H R+ L VP +G
Sbjct: 5 VAATRPRLVTFDATGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAGSLSSRDWWSSVVREAFVGAGVSEAVVRAEMP-LLFPTLYESFASTATWELLDASAGVVQQLARWRAQLPPGELTIGVISNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVDVSPRTCVHVGDTFGTDVLGASRAGWRAVFVA----SDDALGELMPEAFVAMAETEHERIPSLGFVPRIVG 282
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.430e-37 Identity = 99/261 (37.93%), Postives = 131/261 (50.19%), Query Frame = 1
Query: 172 VVTLDCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQASIKRRSQESPCFGAGV-MSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQE--EGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKNVRHI-------RVRELTDVPVALGIA 924
VVT D TGT+M++ + Y L + G+ P + A + ++A +S+E PCFG G M S +WW VVR +L GVPE+ L+ + E F WEL A V+ L + E PL LG +SNFDERLH LL NLG+ FD VLTS+EC +KP+ IF AL R G VHIGD+F KDV GA GW++ V + P KNV + RV +L+ V +A
Sbjct: 103 VVTFDATGTLMQLTEPVGMHYREALLQASGLRLPS-PDHFDAAFKEVYKA----QSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTGVPEKILDPLLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDDPLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGIYDRSRA-VHIGDTFDKDVAGAARAGWNAIFV--RAPPYRMKNVDDLPCDIEFQRVGDLSHVLDIFNLA 355
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A7S2G2K6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2K6_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.260e-36 Identity = 81/225 (36.00%), Postives = 118/225 (52.44%), Query Frame = 1
Query: 169 EVVTLDCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQASIKRRSQESPCFGAG-VMSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQ 840
+++T D TGT++++ + Y VL + GI +P D F+ + Q SPCFG +S+++WWA VVR + GVP + ++ +F FT WEL V+ L+ W QE G LG +SNFDERL LL+ LG+ D FD ++TS+ECG +KP IF AL R G + D VH+G+ + DV GA GW++ V +
Sbjct: 92 QLITFDATGTLIQLAEPVGMHYRQVLMKHTGIR---LPR--PDIFTDAFKEVYDAKCQASPCFGCSDSISAQDWWASVVRDTYTKVGVPSDIIDPLFPLLFDELYHEVFTGTDGWELNADTMMVLDKLKEW-QETGDGPRLGVISNFDERLPKLLEALGIADYFDIIITSKECGMEKPCRQIFDIALTRLGIYERDAA-VHVGNDYDTDVKGATAAGWNALYVKE 309
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A812J2P4_9DINO (HDHD3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812J2P4_9DINO) HSP 1 Score: 152 bits (383), Expect = 1.610e-36 Identity = 90/249 (36.14%), Postives = 124/249 (49.80%), Query Frame = 1
Query: 172 VVTLDCTGTIMRIKGSISRLYLGVLEE-RLGIEEGGIPGVCEQALLDTFQASIKRRSQESPCFGAGVMSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKNVRHIRVRELTDVPVAL 915
++TLD TGT+MR++ I LY+ L R I+ V + F + R+S SP FGA EWW VV GAG+ L+ FD F+ AWEL+P + LR WC LG +SN D RL +LQNLG+ FDFVLTS + ++KP P IF +AL+ AG +H GDSF +D+LGA V W + LV ++++ ++ ELT P A+
Sbjct: 703 LITLDSTGTLMRVRKPIGDLYVDALRRVRPDIQ------VSASEMTRAFPIAFSRQSSLSPSFGADGPGCREWWRAVVEGTMAGAGITVSNLDESFDAIFDDLYGKVFSGKAAWELLPNTLRSLESLRTWCS--ANDCRLGVMSNMDSRLSLILQNLGILQNFDFVLTSYDARAEKPSPIIFHKALEAAGLAPTSQA-LHCGDSFKRDLLGATAVNWMAALV--------DESIDEVQRLELTKAPSAM 934
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A812QRQ7_SYMMI (Hdhd3 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812QRQ7_SYMMI) HSP 1 Score: 143 bits (360), Expect = 5.350e-36 Identity = 88/253 (34.78%), Postives = 124/253 (49.01%), Query Frame = 1
Query: 154 SAARREVVTLDCTGTIMRIKGSISRLYLGVLEE-RLGIEEGGIPGVCEQALLDTFQASIKRRSQESPCFGAGVMSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKN-VRHIRVRELTDVP 906
SA +++LD TGT+MR++ I LY L R ++ V + F A R+S SP FGAG EWW VV GAG+ L F+ F AWEL+P + LR WC LG +SN D+RL +LQNLG+ D FDFVLTS E ++KP IF +AL+ AG +H GDS+ +D++GA V W + LV + + + ++ + V L ++P
Sbjct: 44 SAQVPRLISLDSTGTLMRVRRPIGDLYADALHRVRPDVQ------VSAAEMTRVFPAIFSRQSSLSPSFGAGGCGCREWWRAVVEGTMGGAGIAVSDLGESFEAVFDDLYGHVFCGQEAWELLPRTVRSLESLREWCA--ANDCVLGVMSNMDDRLSVILQNLGILDKFDFVLTSYEARAEKPSAIIFTKALEVAGLAPTSHA-LHCGDSYKRDLIGATSVNWMAVLVDEAVDKAERLDMIKDVSVDHLLNMP 287
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A1Q9ERX8_SYMMI (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9ERX8_SYMMI) HSP 1 Score: 143 bits (360), Expect = 1.430e-33 Identity = 88/253 (34.78%), Postives = 124/253 (49.01%), Query Frame = 1
Query: 154 SAARREVVTLDCTGTIMRIKGSISRLYLGVLEE-RLGIEEGGIPGVCEQALLDTFQASIKRRSQESPCFGAGVMSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKN-VRHIRVRELTDVP 906
SA +++LD TGT+MR++ I LY L R ++ V + F A R+S SP FGAG EWW VV GAG+ L F+ F AWEL+P + LR WC LG +SN D+RL +LQNLG+ D FDFVLTS E ++KP IF +AL+ AG +H GDS+ +D++GA V W + LV + + + ++ + V L ++P
Sbjct: 541 SAQVPRLISLDSTGTLMRVRRPIGDLYADALHRVRPDVQ------VSAAEMTRVFPAIFSRQSSLSPSFGAGGCGCREWWRAVVEGTMGGAGIAVSDLGESFEAVFDDLYGHVFCGQEAWELLPRTVRSLESLREWCA--ANDCVLGVMSNMDDRLSVILQNLGILDKFDFVLTSYEARAEKPSAIIFTKALEVAGLAPTSHA-LHCGDSYKRDLIGATSVNWMAVLVDEAVDKAERLDMIKDVSVDHLLNMP 784
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.750e-33 Identity = 83/243 (34.16%), Postives = 118/243 (48.56%), Query Frame = 1
Query: 169 EVVTLDCTGTIMRIKGSISRLYLGVLEERLGIEEG-GIPGVCEQALLDTFQASIKRRSQESPCFGAGV-MSSEEWWAGVVRTAFL-------GAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDDEKNV 870
+++T D T T++++K + Y +L E P V A F + +++ PCFG G+ M+S EWWA + + G+ + + D F AWEL PG +S + W +EEGGP L +SNFDERLH +L +GV D FDFVLTSRE GS+KP+ F A+ RAG + +H+GD F DV+GA GW S + D N+
Sbjct: 90 QLITFDATDTLIQLKSEVGMTYRLILHEATRFRSRLPTPAVFTSA----FNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDYERGLRDRMDGPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMW-REEGGP-QLAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVADPS-LCMHVGDGFDSDVVGASNAGWHSVWIPPINGDDVPTNI 325
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: A0A8C9L3R9_PAVCR (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Pavo cristatus TaxID=9049 RepID=A0A8C9L3R9_PAVCR) HSP 1 Score: 124 bits (311), Expect = 1.240e-29 Identity = 81/234 (34.62%), Postives = 119/234 (50.85%), Query Frame = 1
Query: 154 SAARREVVTLDCTGTIMRIKGSISRLYLGVLEERLGIEEGGIPGVCEQALLDTFQASIKRRSQESPCFG-AGVMSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPS 852
S R ++T D T++R++ + Y + G++ V +AL +F + + +S+ P +G A +SS +WW VV+ F AGV E+T+ + E + WEL+P A S+ +WC ++G L +G VSNFD RL +L + + FDFVLTS G KPDP IF+ AL+ G R + HIGD + KD AR VG SFL+ G S
Sbjct: 1 SGHRLRLLTWDVKDTLLRLRQPVGPSYAAEAQAH-GVQ------VEPEALNQSFLKAYRAQSRRFPNYGRAEGLSSRQWWVDVVKETFRLAGVHEDTVLSLIAENLYRD----YCSAHNWELLPEA----SETLSWCHQQG--LRMGVVSNFDNRLESILVHCSLRHHFDFVLTSEAVGVAKPDPKIFKTALRLGGVRPEEAA--HIGDDYSKDYRAAREVGMHSFLLHTPGQS 215
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Match: UPI000778057A (haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Coturnix japonica TaxID=93934 RepID=UPI000778057A) HSP 1 Score: 124 bits (310), Expect = 3.250e-29 Identity = 90/251 (35.86%), Postives = 126/251 (50.20%), Query Frame = 1
Query: 112 RCASFQPNRHTMAMSAARREVVTLDCTGTIMRIKGSISRLYLGVLEERL-GIEEGGIPGVCEQALLDTFQASIKRRSQESPCFGAGV-MSSEEWWAGVVRTAFLGAGVPEETLEGVFDEXXXXXXXXXFTRGPAWELVPGAKGVISDLRAWCQEEGGPLALGAVSNFDERLHPLLQNLGVYDMFDFVLTSRECGSQKPDPHIFREALKRAGARKADGVGVHIGDSFGKDVLGARGVGWDSFLVTQKGPSDD 858
RC S P R +AM R ++T D T++R++ ++ Y E R G+E + AL +F+A+ S++ P +G G +SS +WW VV+ F GV EETL E + WEL+PGA +S C++ G L +G VSNFD RLH +LQ + +F FVLTS G KPDP +FR AL+ A HIGD + +D + AR VG SFL+ G S +
Sbjct: 16 RCRSLSP-RPPLAMLGLR--LLTWDVKDTLLRLRRPVALSYAA--EARCHGVE------LRPDALSCSFRAAYTAHSRQYPNYGLGQGLSSRQWWLHVVKETFRLVGVREETLLAQMAENLYRD----YCSPNNWELLPGAAHTLSR----CRQLG--LRMGVVSNFDNRLHEILQRCHLRHLFHFVLTSEAAGVAKPDPEMFRMALRLGAALPEQAA--HIGDDYSRDYMAARQVGMHSFLLHSNGHSTE 243 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig117.1407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig117.1407.1 >prot_F-serratus_M_contig117.1407.1 ID=prot_F-serratus_M_contig117.1407.1|Name=mRNA_F-serratus_M_contig117.1407.1|organism=Fucus serratus male|type=polypeptide|length=300bp MGSRLAFLSWLKLCHGTSHYLPGFATRCASFQPNRHTMAMSAARREVVTLback to top mRNA from alignment at F-serratus_M_contig117:775115..787972- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig117.1407.1 ID=mRNA_F-serratus_M_contig117.1407.1|Name=mRNA_F-serratus_M_contig117.1407.1|organism=Fucus serratus male|type=mRNA|length=12858bp|location=Sequence derived from alignment at F-serratus_M_contig117:775115..787972- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig117:775115..787972- >mRNA_F-serratus_M_contig117.1407.1 ID=mRNA_F-serratus_M_contig117.1407.1|Name=mRNA_F-serratus_M_contig117.1407.1|organism=Fucus serratus male|type=CDS|length=1800bp|location=Sequence derived from alignment at F-serratus_M_contig117:775115..787972- (Fucus serratus male)back to top |