prot_F-serratus_M_contig117.1402.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig117.1402.1
Unique Nameprot_F-serratus_M_contig117.1402.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length174
Homology
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BLAST of mRNA_F-serratus_M_contig117.1402.1 vs. uniprot
Match: D7G1A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A0_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.430e-22
Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 0 
Query:   79 ARSAWPRNARGDKEENDEPNLPGSGLRGVDTSYLEGSEKANAEWFQRTAEREARGELAWYEDPVIYIAILGLVPLLILAWGVVNCYVPGFCESS 172
            A SA  R   GD + +    L GSGLRGVDTS L G+EK +A+WF RT  RE    L W+EDPV Y+ +  +VP++ L WG +NCYVPG C S+
Sbjct:   23 ATSATKRGKEGDDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGALNCYVPGICPST 112
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BLAST of mRNA_F-serratus_M_contig117.1402.1 vs. uniprot
Match: A0A6H5KI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI54_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 9.400e-20
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:   99 LPGSGLRGVDTSYLEGSEKANAEWFQRTAEREARGELAWYEDPVIYIAILGLVPLLILAWGVVNCYVPGFCESS 172
            L GSGLRGVDTS L G+EK +A+WF RT  RE    L W+EDPV Y+ +  +VP++ L WG  NCYVPG C ++
Sbjct:   99 LTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGAFNCYVPGICPAT 168
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig117.1402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1A0_ECTSI2.430e-2251.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI54_9PHAE9.400e-2055.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 142..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig117contigF-serratus_M_contig117:710360..710881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig117.1402.1mRNA_F-serratus_M_contig117.1402.1Fucus serratus malemRNAF-serratus_M_contig117 708528..711251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig117.1402.1 ID=prot_F-serratus_M_contig117.1402.1|Name=mRNA_F-serratus_M_contig117.1402.1|organism=Fucus serratus male|type=polypeptide|length=174bp
MLRFLFVSAVMVERLRSQGAWAFTPSTPRPSYSAISVTATAPERSGGGRS
RRYQDPRAPRGPTWLSGSARFYRPSLPRARSAWPRNARGDKEENDEPNLP
GSGLRGVDTSYLEGSEKANAEWFQRTAEREARGELAWYEDPVIYIAILGL
VPLLILAWGVVNCYVPGFCESSF*
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