prot_F-serratus_M_contig117.1385.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig117.1385.1
Unique Nameprot_F-serratus_M_contig117.1385.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length194
Homology
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BLAST of mRNA_F-serratus_M_contig117.1385.1 vs. uniprot
Match: D7FHY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHY1_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 6.550e-76
Identity = 134/188 (71.28%), Postives = 148/188 (78.72%), Query Frame = 0 
Query:    1 MAGRSSRREGGTGNERIQALVDQKLSEGLQYEALQLYRGVVSRKSARGDDSSAMAIAEQGIGVLLREGYADSATELGNTLVDFLSSHELLPTEERVDVIKRINNNYEDAKRTESLAEEDRQAAEGVEQAGVTDTSGGDIETPRGMPSVGTLQGRFLKLAVAWTAARGPRLAGDPGLCALLGRCLWCEG 188
            MAGRSSR  GG  NERIQ LV+QKL EGLQYEALQLYRGVVSRKSARG+D++A+ IAEQGIGVLL  GYADSATELGN LV  L+ HEL  TEER+++ +R+N  YEDAKR   LAEEDR+ A    Q GV +   G  E  RGM SVG LQGRFLKLAVAWTAARG RL+GDPGLC LLGRCLW EG
Sbjct:    1 MAGRSSR-SGGNSNERIQLLVEQKLGEGLQYEALQLYRGVVSRKSARGNDNAALTIAEQGIGVLLARGYADSATELGNVLVGILNDHELPVTEERLELFRRVNAKYEDAKRAAVLAEEDRRTAAQEGQGGVGEVEEGK-EAGRGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEG 186
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BLAST of mRNA_F-serratus_M_contig117.1385.1 vs. uniprot
Match: A0A835ZB05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB05_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.260e-35
Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 0 
Query:    1 MAGRSSRREGGTGNERIQALVDQKLSEGLQYEALQLYRGVVSRKSARGDDSSAMAIAEQGIGVLLREGYADSATELGNTLVDFLSSHELLPTEERVDVIKRINNNYEDAKRTESLAEEDRQAAEGVEQAGVTDTSGGDIETPRGMPSVGTLQGRFLKLAVAWTAARGPRLAGDPGLCALLGRCLWCEG 188
            +AGRS+RR+G    ER++A+V++KL  GL+YEALQLYRG  +RK+ARGD  SA A+AE G  VL++ G+ADSA+EL   LV+    +    T+ER+D I+R++  Y++         + + +  G+ QA         +  P  + S   LQ +FLK AVAWTAA GPR AGD  L AL GRCL+  G
Sbjct:    5 LAGRSTRRQGNGAAERVKAMVEEKLDAGLEYEALQLYRGQAARKAARGDFDSAAAMAETGAQVLMQRGFADSASELSRQLVEIYKENGCDVTQERLDRIQRLDALYQEVANKGPGELKGKGSEAGIAQAR-------QVRHP--VQSGFELQAKFLKAAVAWTAAAGPRPAGDAALNALPGRCLFAMG 183
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BLAST of mRNA_F-serratus_M_contig117.1385.1 vs. uniprot
Match: D7G1P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P9_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 8.310e-10
Identity = 29/37 (78.38%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:  152 QGRFLKLAVAWTAARGPRLAGDPGLCALLGRCLWCEG 188
            QGRFLKLAVAWT ARG RL  D GLC L+GRCLW EG
Sbjct:   10 QGRFLKLAVAWTTARGQRLRDDSGLCGLVGRCLWNEG 46
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig117.1385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHY1_ECTSI6.550e-7671.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB05_9STRA1.260e-3545.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1P9_ECTSI8.310e-1078.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 99..119
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 6..187
IPR007317Golgi to ER traffic protein 4PFAMPF04190DUF410coord: 51..190
e-value: 5.2E-10
score: 39.5
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 6..187
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..118
e-value: 2.0E-11
score: 45.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig117contigF-serratus_M_contig117:29129..30486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig117.1385.1mRNA_F-serratus_M_contig117.1385.1Fucus serratus malemRNAF-serratus_M_contig117 27521..30486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig117.1385.1 ID=prot_F-serratus_M_contig117.1385.1|Name=mRNA_F-serratus_M_contig117.1385.1|organism=Fucus serratus male|type=polypeptide|length=194bp
MAGRSSRREGGTGNERIQALVDQKLSEGLQYEALQLYRGVVSRKSARGDD
SSAMAIAEQGIGVLLREGYADSATELGNTLVDFLSSHELLPTEERVDVIK
RINNNYEDAKRTESLAEEDRQAAEGVEQAGVTDTSGGDIETPRGMPSVGT
LQGRFLKLAVAWTAARGPRLAGDPGLCALLGRCLWCEGARTEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007317GET4
IPR011990TPR-like_helical_dom_sf