prot_F-serratus_M_contig1169.1377.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1169.1377.1
Unique Nameprot_F-serratus_M_contig1169.1377.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length468
Homology
BLAST of mRNA_F-serratus_M_contig1169.1377.1 vs. uniprot
Match: A0A6H5LCS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCS2_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 2.440e-137
Identity = 216/393 (54.96%), Postives = 271/393 (68.96%), Query Frame = 0
Query:   72 VTGLLGLPIHWDEEDCDYEDSEDETYEPTPSPSSPRDAFPTRTITKNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQSRASLTALSPEVALNSIVRPYLCAASKGALQRTCNDMRQLIDKPEAWQSLDLRASVIGRRTMRSGRQSILSNQPLFFLARSVIQQSRFSRITAVDLRGLNLGAMGSAPDLLVNLFKTCSSLTKLNLWKTFVEDAALPQPDSAVEEVIADNLPGLEHLALEVDASNMGLKMLLHGCRRLKSLHIGSRCSSRMGNSVSMYPNDYGMFFFDRNGAPCLEALTFVDKINIGASGLRHVLKSSSCPRLKSLILIRCTVITDRCLKLIAPEMGRITSLTLDHCPIKPATVQMVLERLPQLSRLVVCTGNGVLENPQ 464
            V G+ G+P+ W+ EDCDY+DSEDE+Y      S P     T    K +                                 ++    +  LS +V L+ I+RPYLC+ SK ALQRTCN MR+L+D P+AW++LDLRA +IGRRTM+SGRQSILS QPLFFLARSV+QQ RFS +  VD++GLNLGAMGS PDLLV LF++C  +T LNLWKT+VED  LPQP  +VE VIA +LPG+ HLALEVD SN GLK+LL GC RLKSLHIGSR S+R G+S+SMYPND GM  F   GAP LE LT VDK NIGA+GLR +L  S+CPRL+ L L+R   + + CLK IAP MGR+TSLTLD C + P+TVQ +L++ P+L+ +VV T +G+L+ PQ
Sbjct:  144 VPGIFGIPVAWNVEDCDYDDSEDESYTQQSGGSGPPTVGATAFAAKCTKTRGSTSVSSATRSRVVRGGR------------RRGTDWMAELSADVVLHGIIRPYLCSTSKCALQRTCNQMRRLLDSPDAWETLDLRAHIIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVRHLALEVDDSNRGLKVLLEGCTRLKSLHIGSR-SNRAGDSISMYPNDLGMKAFTTVGAPYLETLTLVDKFNIGAAGLRCLLDPSACPRLRKLTLVRTGRVNNHCLKAIAPAMGRLTSLTLDQCLVDPSTVQFILDKCPELTSIVVSTQHGLLQQPQ 523          
BLAST of mRNA_F-serratus_M_contig1169.1377.1 vs. uniprot
Match: D7FPP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP5_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 7.120e-136
Identity = 199/306 (65.03%), Postives = 246/306 (80.39%), Query Frame = 0
Query:  159 LTALSPEVALNSIVRPYLCAASKGALQRTCNDMRQLIDKPEAWQSLDLRASVIGRRTMRSGRQSILSNQPLFFLARSVIQQSRFSRITAVDLRGLNLGAMGSAPDLLVNLFKTCSSLTKLNLWKTFVEDAALPQPDSAVEEVIADNLPGLEHLALEVDASNMGLKMLLHGCRRLKSLHIGSRCSSRMGNSVSMYPNDYGMFFFDRNGAPCLEALTFVDKINIGASGLRHVLKSSSCPRLKSLILIRCTVITDRCLKLIAPEMGRITSLTLDHCPIKPATVQMVLERLPQLSRLVVCTGNGVLENPQ 464
            +  LS EV L+ I+RPYLC+ SK ALQRTCN M +L+D P+AW++LDLRA VIGRRTM+SGRQSILS QPLFFLARSV+QQ RFS +  VD++GLNLGAMGS PDLLV LF++C  +T LNLWKT+VED  LPQP  +VE VIA +LPG+ HLALEVDASN GL++LL GC RLKSLHIGSR S++ G+S+SMYPND GM  F   GAP LE LT VDK+NIGA+GLR +L  S+CPRL++L L+R   + D CLK IAP MGR+TSLTLD CP+KP+TVQ +L++ P+L+ +VV T +G+L+ PQ
Sbjct:    1 MAELSTEVVLHGIIRPYLCSTSKCALQRTCNQMHRLLDTPDAWETLDLRAHVIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVHHLALEVDASNRGLRVLLEGCTRLKSLHIGSR-SNQAGDSISMYPNDLGMKAFTAVGAPYLETLTLVDKVNIGAAGLRCLLNPSACPRLRTLTLVRTGRVNDHCLKAIAPAMGRLTSLTLDQCPVKPSTVQFILDKCPELTSMVVSTQHGLLQQPQ 305          
BLAST of mRNA_F-serratus_M_contig1169.1377.1 vs. uniprot
Match: A0A835YZJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ4_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.360e-25
Identity = 78/220 (35.45%), Postives = 112/220 (50.91%), Query Frame = 0
Query:  155 SRASLTALSPEVALNSIVRPYLCAASKGALQRTCNDMRQLIDKPEAWQSLDLRASVIG-RRTMRSGRQSILSNQPLFFLARSVIQQSRFSRITAVDLRGLNLGAMGSAPDLLVNLFKTCSSLTKLNLWKTFVEDAALPQPDSAVEEVIADNLPGLEHLALEVDA-SNMGLKMLLHGCRRLKSLHIGSRCSSRMGNSVSMYPNDYGMFFFDRNGAPCLEAL 372
            S ASLT L PE  L  I+ P+L    K  L   C+  R+L++ PEAW  LD+  +V+G  +++R+GR S L+  P +   + V+QQ RFS ITA +L  L LG   S PDLL  LF  C  +T L++     + +  P     +E  +A N P L+ L + V + SN    MLL  C++LK L +      ++    S+              APCLE L
Sbjct:   92 SHASLTGLPPETLLRHIILPHLSQLDKLRLHMACSATRRLLEAPEAWTELDVSLAVVGITKSLRTGRVSKLTPLPAYMRCKDVLQQKRFSNITAANLSRLMLGT-ASNPDLLAELFARCPKVTSLDITNATADRS--PYAYGVLERFLATNAPQLQRLRITVHSGSNATPVMLLQECKQLKRLALNVLPGQQLSIPESLASAQ----------APCLEEL 298          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1169.1377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LCS2_9PHAE2.440e-13754.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP5_ECTSI7.120e-13665.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZJ4_9STRA4.360e-2535.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 154..463
e-value: 5.1E-25
score: 90.1
NoneNo IPR availablePANTHERPTHR38926FAMILY NOT NAMEDcoord: 250..341
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 247..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1169contigF-serratus_M_contig1169:105759..116333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1169.1377.1mRNA_F-serratus_M_contig1169.1377.1Fucus serratus malemRNAF-serratus_M_contig1169 105759..116333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1169.1377.1 ID=prot_F-serratus_M_contig1169.1377.1|Name=mRNA_F-serratus_M_contig1169.1377.1|organism=Fucus serratus male|type=polypeptide|length=468bp
LQLAEASDGGSALGKGKTGALASKSNTRGKSKAIKSPKGRGASKGKSKGR
GRGKGKGKIPSERKSGSGRSTVTGLLGLPIHWDEEDCDYEDSEDETYEPT
PSPSSPRDAFPTRTITKNSTSSSRKSCRKRASPATSTTRKGSRKGSKEGQ
QQQQSRASLTALSPEVALNSIVRPYLCAASKGALQRTCNDMRQLIDKPEA
WQSLDLRASVIGRRTMRSGRQSILSNQPLFFLARSVIQQSRFSRITAVDL
RGLNLGAMGSAPDLLVNLFKTCSSLTKLNLWKTFVEDAALPQPDSAVEEV
IADNLPGLEHLALEVDASNMGLKMLLHGCRRLKSLHIGSRCSSRMGNSVS
MYPNDYGMFFFDRNGAPCLEALTFVDKINIGASGLRHVLKSSSCPRLKSL
ILIRCTVITDRCLKLIAPEMGRITSLTLDHCPIKPATVQMVLERLPQLSR
LVVCTGNGVLENPQVSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf