prot_F-serratus_M_contig1166.1359.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1166.1359.1
Unique Nameprot_F-serratus_M_contig1166.1359.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length425
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1166.1359.1 vs. uniprot
Match: D7G477_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G477_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 2.180e-79
Identity = 193/441 (43.76%), Postives = 247/441 (56.01%), Query Frame = 0 
Query:    1 MHLIRCVASRGLPLPGTKSYSRLERSTPSAKNKEHRKKRTDW--TGNRAG----EMT-AKSPKRRSRMASLLGDXXXXXXXXXXXXAR---------KANRPPKIKFYGL-GSLGPVLHIKTDNQRIYERSKGIDSKEKPRKSRALPRRRRPNLNLRLLNPKHVDAVFAEGRETIKSLRDIQSSRVFAMGLQRLSAKDTARWVPVSYVCATFHPRR-YTFPQLSHNEQGSNKCFLPGQGRRTSNLLTGYEPSALFLKQKLDKQVARDEEFAKATATAAKTWKLKLLPDIIESEQTAGEIPVGSSESNLDVSGLPLLDEDVEILVYLLRQNYSFKRLDLSRCFFSGKLFVRLAQALAWNCCIEELYVRECVLTEEIVTAALADVLTVNDNIHSVDLRGCRGLRKAGLDNILTAASRKSTLLTVNGMELAALRADDSDMLDFS 423
            MHLI C   +GLPLP            PS K K+ +K+++    T  R G    E+T AKSPKRRSR+ASL+ D            A+         +  +   +    L GS  P++  +  ++R+ E  +     E+ R      R RRPNL  R L+ K VDAVFAEG   I SLRD+QS RV  MGLQRLS KD AR VP +       PRR +T P  +  +    + +LPG+GRRTS L T YEP+ALFLKQ+ +++  R+ +  K TA AA+ W LK L +  E  ++ GE    SS  NL V+GLPLLDEDV+I+V+LLRQN++FKRLDLSRCF S K FV LAQALAWN  IEEL+                         HS+D+RGC+GL +  +  IL  A  K  LLT NGM LA LRA+ SD LD S
Sbjct:   76 MHLIGCFR-KGLPLP----------EVPSRKPKKPKKRQSPGGDTKPREGQGKREITFAKSPKRRSRLASLV-DPHQDANPPGASIAKSHEPLLPLSRIRKSATLWILTLCGSRSPMITSQWKSRRLKELRQHRKEAEESRDHGGQSRIRRPNL--RQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNV-----RPRRRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAERRSIREADLEKDTAKAAEKWNLKPLREKSERCESDGEQT--SSRGNLSVAGLPLLDEDVDIIVHLLRQNHAFKRLDLSRCFLSEKQFVSLAQALAWNSRIEELFXXXXXXXXX-XXXXXXXXXXXXXXXHSLDVRGCKGLDEKSIKVILGGARSKGNLLTFNGMNLADLRAEGSDELDLS 494
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1166.1359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G477_ECTSI2.180e-7943.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 270..414
e-value: 2.3E-14
score: 54.8
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 289..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1166contigF-serratus_M_contig1166:77341..85779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1166.1359.1mRNA_F-serratus_M_contig1166.1359.1Fucus serratus malemRNAF-serratus_M_contig1166 67648..86590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1166.1359.1 ID=prot_F-serratus_M_contig1166.1359.1|Name=mRNA_F-serratus_M_contig1166.1359.1|organism=Fucus serratus male|type=polypeptide|length=425bp
MHLIRCVASRGLPLPGTKSYSRLERSTPSAKNKEHRKKRTDWTGNRAGEM
TAKSPKRRSRMASLLGDDPPSPPPHHQPPARKANRPPKIKFYGLGSLGPV
LHIKTDNQRIYERSKGIDSKEKPRKSRALPRRRRPNLNLRLLNPKHVDAV
FAEGRETIKSLRDIQSSRVFAMGLQRLSAKDTARWVPVSYVCATFHPRRY
TFPQLSHNEQGSNKCFLPGQGRRTSNLLTGYEPSALFLKQKLDKQVARDE
EFAKATATAAKTWKLKLLPDIIESEQTAGEIPVGSSESNLDVSGLPLLDE
DVEILVYLLRQNYSFKRLDLSRCFFSGKLFVRLAQALAWNCCIEELYVRE
CVLTEEIVTAALADVLTVNDNIHSVDLRGCRGLRKAGLDNILTAASRKST
LLTVNGMELAALRADDSDMLDFSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf