mRNA_F-serratus_M_contig1165.1355.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 181 bits (458), Expect = 6.800e-51 Identity = 80/140 (57.14%), Postives = 104/140 (74.29%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTDFSENTYGSCAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D TDELYCG+VG+ +E I ++ECGNNYGW RFEGS C + E+ G C TDRS +TFP++EYCHPDY S + E D+ G+DICG R V+G++V GGYVYRG +AD++YGAYVF + T NI+YI+ QD+G W+ G
Sbjct: 324 DRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIGGYVYRGTYFADVLYGAYVFGDNTSNNIYYIV-QDNGVWSVG 462
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 174 bits (441), Expect = 1.150e-49 Identity = 79/142 (55.63%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTDFSENTYGS--CAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D TD+LYCG+VG+ +E I L+ECGNNYGW RFEGS C + EN + C G DRSG+TFP++EYCHPDY SS +D++T G+DICGDR + G++V GGYVYRG ++DL+YG Y+F + T++NIFY++++ DG W+ G
Sbjct: 324 DRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDY--SSVGDDEFTAGVDICGDRVLLGNAVIGGYVYRGNFFSDLLYGHYIFGDSTMKNIFYLVKEGDG-WSLG 462
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.180e-47 Identity = 77/142 (54.23%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTD-FSENTYGS-CAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D L D LYCG+VG+ +E I LIECGNNYGW RFEGS C + +N + C G DRSG+T+P+FEYCHPDY S+ + E ++T G D CGDR V G+ V GGYVYRG ++DL+ GAY+F + T+RNI+++ E++ G W G
Sbjct: 264 DRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLREEEAG-WAVG 404
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.370e-44 Identity = 76/142 (53.52%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTDFSE-NTYG-SCAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D D LYCG+VG+ +E I L+ECGNNYGW RFEGS C + E N + +C G RSG+TFP++EYCHPDY S+ +D++T G DICGDR + G++V GGYVYRG ++DL+ GAY+F + T++NI+Y++E+D G W+ G
Sbjct: 387 DRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDY--QSTGDDEFTAGNDICGDRVLLGNAVIGGYVYRGNYFSDLLNGAYIFGDSTMKNIYYLVEEDGG-WSLG 525
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI) HSP 1 Score: 163 bits (412), Expect = 6.860e-44 Identity = 74/142 (52.11%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTD-FSENTYGS-CAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D L D+LYCG+VG +E I IECGNNYGW RFEGS C + +N + C G DRS +T+P+FEYCHPD+ S+ + E ++T G D CG+R V G+ V GGYVYRG ++DL+ GAY+F + T+RNI+++ E++DG W G
Sbjct: 305 DRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLKEEEDG-WAVG 445
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.150e-37 Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTD-FSENTYGSCAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D+ TDELYCG+VG +++E + +IECG +YGW FEGS C D F G C+G DR+ Y FPVFEYCH DY SS D CGDR VTG SV GG+VYRG Y D++ G Y+FA+ ++ ++ ++ G WT+G
Sbjct: 397 DTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSSQEE-------FDACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAG 530
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 134 bits (337), Expect = 9.220e-34 Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTDFSENTYG-SCAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTWTSG 420
D L D+LYCG+VG+ +ESI IECGNNYGW +FEG C E+ + +C DRS +TFP F YCHPD++ +D ICGDR+V G++V GYVYRG Y DL+ G +FA+ TL ++++ G W SG
Sbjct: 277 DRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPVDHPSYIVSDQS-ICGDRSVIGTAVIAGYVYRGAKYDDLLGGNLIFADFTLNRLYHLFPTKGGGWGSG 416
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI) HSP 1 Score: 112 bits (280), Expect = 3.130e-26 Identity = 51/94 (54.26%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTD-FSENTYGS-CAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNV 276
D L D+LYCG+VG +E I IECGNNYGW RFEGS C + +N + C G RSG+TFP+FEYCHPD+ S+ + E +T G D CG+R V
Sbjct: 225 DRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLFEYCHPDFDSTDADEQKFTGGADTCGNRFV 318
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI) HSP 1 Score: 101 bits (251), Expect = 1.640e-22 Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 1 DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTD-FSENTYGS-CAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGD 267
D L D+LYCG+VG E I L+ECGNNYGW RFEGS C + +N + C G DRSG+TFP+FEYCHPD+ D DIC D
Sbjct: 314 DRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLFEYCHPDF-----------DSTDICAD 393
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Match: A0A835YJB6_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB6_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.340e-17 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 16 ELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTDFSENTYGSCAGTDRSGYTFPVFEYCHPDYFSSSSSEDDYTDGIDICGDRNVTGSSVTGGYVYRGQAYADLIYGAYVFAEVTLRNIFYILEQDDGTW 411
+L+C +VG ++IE I ++ G NYGW ++EG T + D +T PV++YCH + EDD IC D+ TG +TGG+VYRG +D+ G Y+FA+ + ++ Q DG W
Sbjct: 402 DLWCADVGQDRIERIVRVKAGGNYGWRKYEG---------TRDNIPDDDAFNFTPPVYQYCH----QGEAGEDDDP----ICKDKPFTGECITGGFVYRGAKQSDVYGGQYIFADWQAHRLLRLIRQPDGGW 516 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1165.1355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1165.1355.1 >prot_F-serratus_M_contig1165.1355.1 ID=prot_F-serratus_M_contig1165.1355.1|Name=mRNA_F-serratus_M_contig1165.1355.1|organism=Fucus serratus male|type=polypeptide|length=140bp DSLTDELYCGNVGYNKIESIYLIECGNNYGWVRFEGSLCTDFSENTYGSCback to top mRNA from alignment at F-serratus_M_contig1165:12308..14989+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1165.1355.1 ID=mRNA_F-serratus_M_contig1165.1355.1|Name=mRNA_F-serratus_M_contig1165.1355.1|organism=Fucus serratus male|type=mRNA|length=2682bp|location=Sequence derived from alignment at F-serratus_M_contig1165:12308..14989+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1165:12308..14989+ >mRNA_F-serratus_M_contig1165.1355.1 ID=mRNA_F-serratus_M_contig1165.1355.1|Name=mRNA_F-serratus_M_contig1165.1355.1|organism=Fucus serratus male|type=CDS|length=840bp|location=Sequence derived from alignment at F-serratus_M_contig1165:12308..14989+ (Fucus serratus male)back to top |