mRNA_F-serratus_M_contig1164.1354.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1164.1354.1
Unique NamemRNA_F-serratus_M_contig1164.1354.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: D8LCQ8_ECTSI (Gamma carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCQ8_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 3.170e-136
Identity = 219/283 (77.39%), Postives = 241/283 (85.16%), Query Frame = 1 
Query:    1 MFQTARSAVGSVARRLGRGIDELGAALETHPFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKASRDPTYVFQVPPEGDDNLAYNDVEGQGVPGRVFNTNLRSPDVEPFEREYAGDV 849
            M   A++AVG  ARR+GR +D +GAALETHP+ E+LL STRSV +KGK PST  ASFVAPNASVIG+VKVG G+SLWYGSVVRGDVNHVVIG G+ +GDSAVVHVAGLAG  P+++GNNVVIGPRATIHACTL+D+CMV AGATVMDXXXXXXXXXXXXXXXXXX   VP GQLWAGTPAVYVRD+SE E  SI   A + Q +SL HASEC KGPLEIELD RKW+EKASRDPTYVFQVP EGDDNLAYNDVEGQGVPGRVFNTNLRSPDVE     Y GD+
Sbjct:    1 MLNQAKTAVGMAARRVGRSLDGMGAALETHPYTEKLLASTRSVGHKGKVPSTAQASFVAPNASVIGDVKVGEGASLWYGSVVRGDVNHVVIGAGSSVGDSAVVHVAGLAGNKPTIVGNNVVIGPRATIHACTLKDDCMVGAGATVMDXXXXXXXXXXXXXXXXXXXXXVPTGQLWAGTPAVYVRDISELEAASIVTTAAETQALSLAHASECEKGPLEIELDERKWDEKASRDPTYVFQVPEEGDDNLAYNDVEGQGVPGRVFNTNLRSPDVEYEPPTYEGDM 283
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: A0A7S1Z4W2_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4W2_9STRA)

HSP 1 Score: 198 bits (503), Expect = 7.190e-59
Identity = 132/265 (49.81%), Postives = 174/265 (65.66%), Query Frame = 1 
Query:   22 AVGSVARRLGRGIDELGAALETHPFREQLLPSTRSVAYKGKQPS-TEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKASRDPTYVFQVPPEGDDNLAYNDVEGQGVPGRVFNTNLRSPD 813
            A  + ARR+G  +D +GA++E   + E+L+PSTR VA  G  P+ +E+A+FVAP+ASVIGNV +G+ SS+WYG+ VRGDVNHVVIG+ + IGD AV+HVA + G  P+V                TL D C+V A A V+D XXXXXXXXXXXXXXXXX    P GQ WAG+PA  VR LS++E+ +I N A +  +++ +HA ECAK   ++  D  K+ +   RDP Y FQ  P G D    +DV GQG PGR+FNT L  P+
Sbjct:   12 AASNAARRMGLALDGMGASMEVAKYTERLVPSTRFVAVDGVAPAVSESAAFVAPSASVIGNVSLGSKSSIWYGATVRGDVNHVVIGDNSSIGDRAVIHVAKIQGDSPTVXXXXXXXXXXXXXXXATLGDSCVVGASAQVLDGXXXXXXXXXXXXXXXXXXXXXPTGQYWAGSPAKMVRSLSDEELATIINSANETTQLASLHAGECAKDLAQLVADEEKYLDDLERDPEY-FQ--PTGVDE---DDVLGQGQPGRIFNTTLSHPE 270
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: A0A8K1CL43_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL43_PYTOL)

HSP 1 Score: 191 bits (486), Expect = 1.230e-56
Identity = 98/223 (43.95%), Postives = 141/223 (63.23%), Query Frame = 1 
Query:    1 MFQTARSAVGSVARRLGRGIDELGAALETH-PFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELD 666
            M + +   VG   R LG+ +D +G  LE    + E L PSTR VA  G+ P+ E  +F+APNA+VIG+VK+G GSS+WYG+ VRGDVNH+ IGE T I D AVVHVA +   +P+ IG+NV +GP A IHACT++D C++  GA V+D                  +  +P+GQLW+G PA ++RDL+ +E+  +   +++  E+S VHA+EC K   ++E D
Sbjct:    1 MLKQSLEVVGKSIRSLGQSLDRVGVTLEGKLSYTEHLNPSTRLVANTGRAPAIEKGAFIAPNAAVIGDVKIGKGSSVWYGATVRGDVNHITIGENTNIQDHAVVHVAKIHQDLPTKIGSNVTVGPSAIIHACTIQDHCIIGTGAQVLDGAVVEAQSIVTAGSIVTYNKKIPSGQLWSGVPARFLRDLTAEEIEFMKQCSLEYAELSQVHATECDKTFEQVEAD 223
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: A0A2D4C5C0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5C0_PYTIN)

HSP 1 Score: 191 bits (484), Expect = 2.450e-56
Identity = 117/226 (51.77%), Postives = 155/226 (68.58%), Query Frame = 1 
Query:    1 MFQTARSAVGSVARRLGRGIDELGAALE-THPFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRK 675
            M + +   VG   R LG+ +D +G +LE    + E L PSTR VA  G+ P+    +FVAPNASVIG+VK+G GSS+WYG+ VRGDVN + IGE T I D AVVHVA +   +P+ IG+NV IGP A IHACT+ D C++  GA V+DXX   XXXXXXXXXXXXX   VP+GQLW+G PA Y+RDL+ +E+  +   +++  E+S VHA+EC K   E+E D ++
Sbjct:    1 MLKQSLEVVGKSIRALGQSLDRVGVSLEGALTYTEHLNPSTRCVANTGRAPTIAKGAFVAPNASVIGDVKIGKGSSVWYGATVRGDVNFITIGENTNIQDHAVVHVAKIHQDIPTKIGSNVTIGPSAIIHACTINDHCIIGTGAQVLDXXVVEXXXXXXXXXXXXXXKKVPSGQLWSGVPARYLRDLTAEEIEFMKQCSLEYAELSQVHATECGKTFEEVEADKQR 226
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: A0A448ZKR1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKR1_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.150e-55
Identity = 109/266 (40.98%), Postives = 158/266 (59.40%), Query Frame = 1 
Query:   22 AVGSVARRLGRGIDELGAALETHPFREQLLPSTRSVAYKGKQPSTEAAS-FVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLE-IELDLRKWNEKASRDPTYVFQVPPEGDDNLAYNDVEGQGVPGRVFNTNLRSPD 813
            A    ARR+G  +D +GA +E   + E+L+PS+R V+  G  P+   A+ F+AP+ASVIGNV +G  SS+WYG+ VRGDVN+V IG  T IGD AVVHVA + G  P+VIG+NV IG  A +HACT+ED  +V   A VMD                   T +P+G+LW+G PA   R L+ +E+  I+  A D  E++ +HA E +K   + +E +  + + K  ++  +   +P         +DV GQGVPGR+FN+ L +P+
Sbjct:   11 AASGAARRIGATLDTMGANMEVAKYTERLVPSSRIVSVDGVAPALPGANNFIAPSASVIGNVTIGEHSSVWYGATVRGDVNNVKIGTKTSIGDRAVVHVAKIQGDHPTVIGDNVTIGAGAIVHACTIEDLVVVGESAQVMDGATVGTNSVVAAASIVTAGTKIPSGELWSGAPAKKERALTSEEIAEISESAHDTLELAYLHAVENSKDYKQLVEEEEDRLDRKLRKNAWFDPNIPDP-------DDVLGQGVPGRIFNSTLTNPE 269
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: H3GWK8_PHYRM (Uncharacterized protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3GWK8_PHYRM)

HSP 1 Score: 187 bits (476), Expect = 3.570e-55
Identity = 110/218 (50.46%), Postives = 144/218 (66.06%), Query Frame = 1 
Query:   28 GSVARRLGRGIDELGAALETH-PFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKW 678
            G   R LG+ ID +G +LE    + E L PSTR+V   G+ P  E   FVAPNASVIG+VKVG GSS+WY + VRGDVNH+ IGE T I D AVVHVA +   +P+ IGNNV +GP A +HACT++D C++  GA V+D       XXXXXXXXXXX   VP+GQLW+G PA Y+RDL+ +E+  +   + +  +++  HA ECAK   E E D  ++
Sbjct:    7 GKAIRSLGQTIDRVGVSLEGKLTYTEHLNPSTRAVKNLGRSPKFEEGVFVAPNASVIGDVKVGKGSSIWYNATVRGDVNHITIGENTNIQDQAVVHVAKIHKDIPTKIGNNVTVGPAAIVHACTIQDHCIIGTGAQVLDGAVVGAKXXXXXXXXXXXXXQVPSGQLWSGVPARYLRDLTAEEMQFMQQCSAEYMQLAEQHAEECAKSFEEYEADTERY 224
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: A0A7S0CH57_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CH57_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.280e-54
Identity = 120/259 (46.33%), Postives = 164/259 (63.32%), Query Frame = 1 
Query:   40 RRLGRGIDELGAALETHPFREQLLPSTRSVAYKGKQPSTEA-ASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKASRDPTYVFQVPPEGDDNLAYNDVEGQGVPGRVFNTNLRSPD 813
            R++G  +D LGA+LE   + E+L+PSTR VA  G  P+T   A+FVAPNAS+IG+V +G  +S+WYG+ VRGDV  + IG+   IGD +V+HV  + G  P +IGN V +GP A IH  TLE+  MV AGA V+D    XXXXXXXXXXXXXX   V    LWAG+PA  +RDL ++E+ +      DN  ++ +HA ECAK   ++  +  +  +   RDP YVFQ    G+  +  NDV G G PG +F+  L +P+
Sbjct:   17 RKVGIALDSLGASLEVAKYSERLVPSTRFVAVDGIGPTTSPYAAFVAPNASLIGDVTIGKDTSVWYGATVRGDVQKITIGDNCSIGDRSVLHVVKIQGDFPIIIGNGVTVGPGAIIHGATLENNVMVGAGAQVLDGSVVXXXXXXXXXXXXXXXXRVKRNTLWAGSPAKMLRDLGKEELKASIQTTEDNIGLAYIHAEECAKPQNQLHDEELQHEDDEVRDPEYVFQQRKPGE-KVDDNDVLGIGSPGIIFDNALSAPE 274
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: M4C3G6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3G6_HYAAE)

HSP 1 Score: 184 bits (467), Expect = 8.040e-54
Identity = 107/219 (48.86%), Postives = 143/219 (65.30%), Query Frame = 1 
Query:   25 VGSVARRLGRGIDELGAALETH-PFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKW 678
            VG   R LG+ ID +G +LE+   + E L PSTR+V    + P+ E   FVAPNASVIG+VKVG GSS+WY + VRGDVNH+ IGE + I D AVVHVA +    P+ IGNNV +GP A +HACT++D C++  GA VMD       XXXXXXXX   D  VP+GQLW+G PA Y+RDL+ +E+  +   + +  +++  +A ECAK   E E D  ++
Sbjct:    6 VGKFIRSLGQTIDRVGVSLESSLTYTEHLNPSTRAVKNLRRAPTFEEGVFVAPNASVIGDVKVGKGSSIWYNATVRGDVNHITIGENSNIQDQAVVHVAKIHRDSPTKIGNNVTVGPAAIVHACTIQDHCIIGTGAQVMDGSVIGAKXXXXXXXXVTQDKQVPSGQLWSGVPARYLRDLTAEEMHFMQQCSAEYTQLAEQYAVECAKSFEEYEADTERF 224
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: A0A484E3A7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3A7_BRELC)

HSP 1 Score: 184 bits (467), Expect = 2.040e-53
Identity = 95/214 (44.39%), Postives = 133/214 (62.15%), Query Frame = 1 
Query:   28 GSVARRLGRGIDELGAALETH-PFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELD 666
            G   R LG+ ID +G +LE    + E L PSTR++   G+ P      FVAPNASVIG+VKVG GSS+WY + VRGDVN+++IGE T I D AVVHVA +   +P++IGNNV +GP A +HACT+ D C++  GA V+D                  +  +P+GQLW+G PA Y+RDL+ +E+  +   + +  +++  HA ECAK  +E E D
Sbjct:   39 GKAIRSLGQTIDRVGVSLEGKLTYTEHLNPSTRAIKNLGRSPKFGDGVFVAPNASVIGDVKVGNGSSIWYNATVRGDVNYIIIGENTNIQDQAVVHVAKINKDIPTIIGNNVTVGPAAIVHACTIHDHCIIGTGAQVLDGAVIGAKSIVTAGSIVTYEKQIPSGQLWSGVPARYLRDLTIEEIQFMQQCSSEYSQLAEKHAQECAKSFVEYEAD 252
[Close]
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Match: W7TZB8_9STRA (Trimeric LpxA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZB8_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.980e-53
Identity = 105/274 (38.32%), Postives = 148/274 (54.01%), Query Frame = 1 
Query:   19 SAVGSVARRLGRGIDELGAALETHPFREQLLPSTRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGT*IGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKASRDPTYVFQVPPEGDDNLAYNDVEGQGVPGRVFNTNLRSPDVEPFEREYA 840
            SA G+ AR  GR  +  G  LE  P+ E L PST+ +++ GK P+    +FVAP+AS+IGNV+VG G+S+WYG+ +RGDV  + +GE T IGD AVVHVA L G  P+ I                  DE  V AGA V+D                     VP+G LWAG PA +VR+L+ +E+ +I   A+ + E++ VH +E +K  +++E D   W +K  R P Y  ++    D      ++ G GVPGR+FN  L  P  E  +R  A
Sbjct:    7 SAFGAAARAAGRAFENAGKLLEVAPYVEHLAPSTKVLSFGGKAPAIHETAFVAPSASIIGNVQVGKGASVWYGATLRGDVQSITVGEQTTIGDRAVVHVAKLKGDAPTKIXXXXXXXXXXXXXXXXXXDESTVGAGAQVLDKAVVKSHAALAPGAVLTPGKTVPSGHLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETSKDYVQVEADEEAWIDKKQRSPNYWPRLKDPKDP----AEIPGFGVPGRIFNHPLTVPLPEGSDRSGA 276
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1164.1354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCQ8_ECTSI3.170e-13677.39Gamma carbonic anhydrase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S1Z4W2_9STRA7.190e-5949.81Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A8K1CL43_PYTOL1.230e-5643.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C5C0_PYTIN2.450e-5651.77Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A448ZKR1_9STRA3.150e-5540.98Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
H3GWK8_PHYRM3.570e-5550.46Uncharacterized protein n=19 Tax=Peronosporaceae T... [more]
A0A7S0CH57_9STRA4.280e-5446.33Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
M4C3G6_HYAAE8.040e-5448.86Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484E3A7_BRELC2.040e-5344.39Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W7TZB8_9STRA4.980e-5338.32Trimeric LpxA n=2 Tax=Monodopsidaceae TaxID=425072... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1164contigF-serratus_M_contig1164:252141..265336 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score243.4
Seed ortholog evalue7.6e-62
Seed eggNOG ortholog2880.D8LCQ8
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009791,GO:0009853,GO:0009900,GO:0009901,GO:0009908,GO:0009987,GO:0010033,GO:0016020,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0019222,GO:0019866,GO:0022414,GO:0022607,GO:0030964,GO:0031090,GO:0031323,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0042221,GO:0042802,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0048367,GO:0048437,GO:0048438,GO:0048443,GO:0048466,GO:0048608,GO:0048609,GO:0048653,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051259,GO:0051260,GO:0061458,GO:0065003,GO:0065007,GO:0070206,GO:0070207,GO:0070469,GO:0071840,GO:0090567,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0099402,GO:1902494,GO:1990204,GO:2000377
EggNOG free text desc.carbonate dehydratase activity
EggNOG OGs2QTES@2759,COG0663@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size849
Cds size516
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1164.1354.1prot_F-serratus_M_contig1164.1354.1Fucus serratus malepolypeptideF-serratus_M_contig1164 259790..265336 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929066.5760057-UTR-F-serratus_M_contig1164:252140..2522461622929066.5760057-UTR-F-serratus_M_contig1164:252140..252246Fucus serratus maleUTRF-serratus_M_contig1164 252141..252246 +
1690962690.0067282-UTR-F-serratus_M_contig1164:252140..2522461690962690.0067282-UTR-F-serratus_M_contig1164:252140..252246Fucus serratus maleUTRF-serratus_M_contig1164 252141..252246 +
1622929066.5891533-UTR-F-serratus_M_contig1164:258588..2586891622929066.5891533-UTR-F-serratus_M_contig1164:258588..258689Fucus serratus maleUTRF-serratus_M_contig1164 258589..258689 +
1690962690.0187504-UTR-F-serratus_M_contig1164:258588..2586891690962690.0187504-UTR-F-serratus_M_contig1164:258588..258689Fucus serratus maleUTRF-serratus_M_contig1164 258589..258689 +
1622929066.6017802-UTR-F-serratus_M_contig1164:259663..2597891622929066.6017802-UTR-F-serratus_M_contig1164:259663..259789Fucus serratus maleUTRF-serratus_M_contig1164 259664..259789 +
1690962690.0281777-UTR-F-serratus_M_contig1164:259663..2597891690962690.0281777-UTR-F-serratus_M_contig1164:259663..259789Fucus serratus maleUTRF-serratus_M_contig1164 259664..259789 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929066.6176739-CDS-F-serratus_M_contig1164:259789..2598231622929066.6176739-CDS-F-serratus_M_contig1164:259789..259823Fucus serratus maleCDSF-serratus_M_contig1164 259790..259823 +
1690962690.0379367-CDS-F-serratus_M_contig1164:259789..2598231690962690.0379367-CDS-F-serratus_M_contig1164:259789..259823Fucus serratus maleCDSF-serratus_M_contig1164 259790..259823 +
1622929066.6304903-CDS-F-serratus_M_contig1164:260410..2605621622929066.6304903-CDS-F-serratus_M_contig1164:260410..260562Fucus serratus maleCDSF-serratus_M_contig1164 260411..260562 +
1690962690.0476294-CDS-F-serratus_M_contig1164:260410..2605621690962690.0476294-CDS-F-serratus_M_contig1164:260410..260562Fucus serratus maleCDSF-serratus_M_contig1164 260411..260562 +
1622929066.6433754-CDS-F-serratus_M_contig1164:261433..2615201622929066.6433754-CDS-F-serratus_M_contig1164:261433..261520Fucus serratus maleCDSF-serratus_M_contig1164 261434..261520 +
1690962690.066813-CDS-F-serratus_M_contig1164:261433..2615201690962690.066813-CDS-F-serratus_M_contig1164:261433..261520Fucus serratus maleCDSF-serratus_M_contig1164 261434..261520 +
1622929066.6577735-CDS-F-serratus_M_contig1164:262300..2623981622929066.6577735-CDS-F-serratus_M_contig1164:262300..262398Fucus serratus maleCDSF-serratus_M_contig1164 262301..262398 +
1690962690.082317-CDS-F-serratus_M_contig1164:262300..2623981690962690.082317-CDS-F-serratus_M_contig1164:262300..262398Fucus serratus maleCDSF-serratus_M_contig1164 262301..262398 +
1622929066.6700907-CDS-F-serratus_M_contig1164:265191..2653361622929066.6700907-CDS-F-serratus_M_contig1164:265191..265336Fucus serratus maleCDSF-serratus_M_contig1164 265192..265336 +
1690962690.0910494-CDS-F-serratus_M_contig1164:265191..2653361690962690.0910494-CDS-F-serratus_M_contig1164:265191..265336Fucus serratus maleCDSF-serratus_M_contig1164 265192..265336 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1164.1354.1

>prot_F-serratus_M_contig1164.1354.1 ID=prot_F-serratus_M_contig1164.1354.1|Name=mRNA_F-serratus_M_contig1164.1354.1|organism=Fucus serratus male|type=polypeptide|length=172bp
MPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDGAKVSSGAMVAPGA
TVSPDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASE
CAKGPLEIELDLRKWNEKASRDPTYVFQVPPEGDDNLAYNDVEGQGVPGR
VFNTNLRSPDVEPFEREYAGDV
back to top

mRNA from alignment at F-serratus_M_contig1164:252141..265336+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1164.1354.1 ID=mRNA_F-serratus_M_contig1164.1354.1|Name=mRNA_F-serratus_M_contig1164.1354.1|organism=Fucus serratus male|type=mRNA|length=13196bp|location=Sequence derived from alignment at F-serratus_M_contig1164:252141..265336+ (Fucus serratus male)
ATGTTTCAGACGGCGAGAAGCGCTGTGGGTTCGGTGGCCCGTCGGTTGGG
TCGAGGTATAGACGAGCTTGGTGCTGCCCTTGAGACGCACCCTTTTCGCG
AGCAATGTGAGACTTTATTTACAAGTAACCTGACGAAGAACTACTCGTTT
TACTCTGTCTCTGGTACAAAAAACTCTAGCGTTCTACTGTAGCGATGCCC
TCTATACATGTATAGGTCACTACCAAGCCATCGAACTGCATTCTGGTTAT
GTAGGCGCATGCAGCAAGGCTTGTCGATAAGGCATTGAAATATGTCGTGA
ATACGTCTGATAATATTTGGTCGGGTCGAGTGGGGTAGGATTTGGGCGTC
GAGGCTCACAATTGTACCAAGGCTTTTGGCTGACTTTTGAGACTACAATA
GATGGAGCGTTTCTAAAGTGGTACCAGGTACCAGGTATAGATTATCAAGC
GCAAACGAGGACAGCGAAATAAGCAGTGTCTGTGTTGAGCTGACCACAAG
CAGGATTAGCAACCACACCCGGTTGGTCCATACTCTTGCTATATGTGTGA
CCATACATACCAATGACTGCTGTTCTGATACACAAGACTACTACTACGTG
CAGTTGTCAGTAACTCGTACTTTGTACTGTAGTGTTCCTCTGGTACTACT
CTGTTGTACCAGTACAGCTTATTAACAACAGGCAGTGTCTTGTACAGGAT
AAGTCATCGGGTACTATAGCGTGCAAGGGCCAGCGAGCAGACAGCTCTGA
TGGCAGACAAAACCTACAGTGCAGCAGTATCAACTTAAAGAAAAATCTGA
ACTCATCTAGACTACATCTTCTGAATATCCCCCAGTCAGGGGGGATAATG
TCAAAACGTTTAGCTATCAATAGCAGACAGCTCTGATGTCAGACAAAACT
TGCACTACAGTATACCGGTATCAGTTATTGGGAGCTGTTGTAACCCTACC
TGATACAGTGCGTTTGTGGAAAGAAAAGCGCACCATCAAGGTACTATTAA
TAATAGTACCGAAGGATGCTCTCCAGAGTATATGATAGCACGCCCGCATG
GAACACATTCAATTCAAACCTTCAAAATGAAACATGGCTTCTCTTTTAGA
ATTTGAGTGGCCCAACCAGGTGATGCTCAACACGTGTGGGACGAAAGCTT
GTTTTTGTTTGTGATCTCACTTACGGCCGATGGGCCTCAACGTGCCTTTA
TAGGTTACCAATCCCTCCTACCTACTTGCAACATGCCCACTTCTTGAATC
CCGTGAGTAAGCACCACATTCGGCCTGAGTGTGGAGAATGGGCAGCCTGA
CGCGGGACGGGACGGCCGGACCCGTATCGCGAGACCAAATTCTCAGGCGC
GAACGGGGATAGGGAAATAATTCATTTTCCCTGTTTAGCTGACCACGAGC
AGGATTAGCAACCTTACCCGAGTATCTATACTCTGCTATATATGATGACT
ATACATAGATACCTATTGCAACCGCCTATTTATTGAATTGCACGTAACCG
CGCAATCCAGCCCCATGGTAGATTACATTAGCAGTAGTGATTATAGAACT
ACAGTATGCTATTAAAACCAGCCTGCATTGGTCTTCCCGATGACGGAGGA
TCATGATTGCTGTCACGAAAACCTGATACAATGTTTCTCTGTGTGTTGTT
GGGGAGATCGAGCACCAAACACAGGAGAATGGGCACCAACCTCCTAAGGT
TGTCAATCCTGCTCGTGGTTAGCTAAACAGGTAAAATACATTTCCCCGGT
CTTTGCGCCTGAAAGTTCGATCTCGTGGCAAAAGAGAAACGATTTCAATA
TCGCAGTACACTATCGGTACCTGTGTGGGTACGTTTGCTTCAGTTCAGAT
TGAAACTCGTCTTGTATCGTGGAAACCCTTTGGTGCATGTTTCTTACCTC
CCAAATGCCAGCACGCTCGCGGGGACCGCGTAGAAACTTTTCTCCGTCTC
GTTGAAACCGATTCTCCCCCGCAGCTCGCAGAGTAAGTGGTTTTGTAAGA
GCTGCAGGAGGTGTGGGTGTAGAGAATCGTCACAAGGTTTAGGTTTGAAT
GCGTTCAGGGTTTTTAATAAGAGCTGGAGGCGTAGTCCTTTGTCTCCCTC
CTGTGGTTGGGTGACAGTTTTGACAGTTTTGACCAAATAGGTTGTTGCAA
CATACCTGGTAGCGGGTAAAGCGGGTATTCGTACCCCGAGAAAAGTAGTA
CAGCGTTTGCTGGCTGCGAGCAATCCTCCCTCTCCACAGCTACCGCAATG
CAGCAGTAACTTATGGTGAGCCATGTATGAAACTAGGATTGCTACTACTG
TAGCGTGAGGTAGGTTTCTTTTAGCTTCTGGAGGCGTTTCAGCGCTCGAT
TCTATCGGAAGAATACGTTTTTGGGATCGCTGCCCGCTTCGCTGATTCGT
ATCGGAAACAATTGTACTGTCTTGTCTCTGGCGAAAACAAGGTCTGTTGT
TCGCGGCGATACACTCGTCCATCTCTCCTCGCCACTCTATCAGTAGCTGG
AGaATGGGAGCTAGAGAGACTGCTGGAGACGAGCCGTCTCGAAGGAGCAA
TAGACAAGTTTAGTTTAGGACACCGCTCAAAAAGCGTGTAGGAAAAAGGT
ACCTAAACTGCTTACTTTCAACGGTCGGCAGCTGATGTTGGCACTACGAT
GCACTGTTTTGTCATCTGCATCATGTGTGTGTGCGCGTGTGTGTGTGTTT
TCTTCCCATTTATTCTGGACATCAATTTCGTTGGACGTACCAGCCGGGGT
CACGCCGGAGGAAGGTCACACAGGATTTCTCCTCCACCTTCCTTATGCGG
TGTGTGCCTCAATTTTTCTCGCGAGAAGGATTCAGCCATTCCTTTCCCTC
GTCGACTGTGAAGTAGAATTTTGTGTATTAATGAGTTCATCGTTCTCCAC
CTGTTGGGCATTTGTTTTATTTTTTTTTGTTTTTTTTGTGAGCAAAATCT
CGTTTACCGGGATTTGGACTCACGTCCCAACGTGTCAGAAGGTTACGAGG
TTATTTCTGAGCTACCGGGGCGACCGGCTGTGTGTGGTCCATCATAATAG
GTAAACTCGTACACCTAGTAGTACGAAAGTCGTGAGTTCGGTTCTTGTAA
AAATCATAATTTTTATTCTGGCGTCGGTAGCGGAAAGCATGAGAACGCGA
GTAAGTGAACTTCAGTCATTGGTTGACTATTCGAGTTGCCAAAGTGCTAA
ACTTGCATCGCCATTGGTCGACGAGTGGAGTTGTAAGGCGACAACCGGGG
AGAGAAAGAATTGCCAAATGCTCGGTGAAATCGAGGCGAGACTATTTATT
ATCTGACCCCGAGCAACGCAGATTTTGAGCGGATTGCAATCCAAGCATGC
GTATGATGAGAGCGATCAAAGAATGCGGTAACGAATTAGTTACGGGCGCC
GCTGTCTTCCTCGTGTCGAGAAAAGCCTCCAAACGTCTTGAAGAAACCCC
CAATCAGTGGAATCGAAGACATGTTGGGAGAAAAGGACGTCTGACCGTGG
AATGACATGGTTACAGAGAAGAGAGAAGGAAGAGGCTTCGAAAGAGGGAG
CTTCCCGTCGACGGTTTGCAGTTACTTAGTGTTGTCTTGTGTGAGACCGC
GCAATCTGGTGGAGGTTGCCTTGAGTTGAGACCGATATACCTCCCACTTT
AAACCGAGAACCCATGGAGGCATTGCAACTACTTGGTTTTGGCGTAAAAA
CGATAATATAGGATTCTAGAGGGGTTTTTTGTCTACTCTACCCCAAGGCA
AGAGTCGACAGCATCAAAATTATACTATTTATCGGTACGAACAAAATAGT
AAAGCACCGTGCTGCTGTAAGTGTAAAGTGTAACTACAAATATATAGCCC
AAAAAGAAAATTCTACTATTTATCAGTACGAACAAAATAGTAAAGCACCG
TGCTGCCGTAAGTGTAAAGTGTAACTACAAATATATAGCCCAAAAAGAAC
ATTGTACCATTTATCGGTACGATCAAAAAGCAAAGCACCGTGCTGCCGTA
AGTGTAAAGTGTAACTACAAATATGTAGCCCAAAAAGAACATTCTACCAT
TTATCAGTACAAACAAAATAGTAAAGCACCGTGCTGCTGTAAGTGTAAAG
TGTAACTACAAATATATAGCCCAAAAAGAAAATTCTACTATTTATCAGTA
CGAACAAAATAGTAAAGCACCGTGCTGCCGTAGTAAGTGTAAAGTGTAAC
TACAAATATATAGCCCAAAAAGAACATTGTACCATTTATCGGTACGATCA
AAAAGCAAAGCACCGTGCTGCCGTAAGTGTAAAGTGTAACTACAAATATG
TAGCCCAAAAAGAAAATTCTGCTATTCATCAGTACCAACAAAATAGTAAA
GCACCGTGCTGCCGTAAGTGTAAAGTGTAACTATAAATATATAACCCAAA
AAGGCGGCGCTTACTTTAGTCTTAAATGACTGCATACATATCTATCAAGT
TTCCCTGCGTTCGAAAAATCTCCGTATGAACGGCGGGGGGGGGAGTCCTT
GCCATCGTCCCAAAACTAGCAGTAATACGAATAGAGAAATAAGGCAAATG
TCGGAGGTTGGGGGTTCTTGACCTCGAGGGGGTTTTCTAGGATATCAAAA
TACCTGAAGGTATTTTAGGGGAGAAATTATTCTGGACCTAGTCTCAAATA
TCCAGAGACTCACTGCCTCATAATGTAATTCATGCAACTTAAAACATAGC
AGGAAACTTTTACGACCGGTAGTATTGGGTAGGTAGAGCTCTTGTGGTTG
TCTAGTAAAGCCAGTTATGGATCGATTGAACCTCTGCAGCTCCGCTGGCG
ACTGGAGCGCAACCTCCTGCACCTGGTTTACCGCCATCAAGCTTGCTGAA
CGCCATATCAATTACTCAACTATTGATGGATCGTTCTGTCACCTGGCTGT
CACCTGGCTGGCCCGCCCCGACAGGCAGCAGCAGCAGCGGTCGATAAAGA
CAATAAAGACAAATGGGTGGTGCAGGGCGGGTAGTAGTGATGCCGATTTT
TGACCCCTAGCCATAATTTCTGAGCTTTCAACGAAAACAGCCCGCGGCTT
CGCATGTCGGTGGAGGAGCCTACAGAGGTCTTCTGGATCTATATTTATAA
TTTGTAATGTGCAGTCAGCCAGTCACCCTTGGGGCAACTTTTGGGTCGTG
GTGAGGGGACCTCCCTTTCAAAAAAAGAATCGAGCGCGGGAGGGTGTGTT
GGTCCACGTTTTGAAAAATGTACGGCACGGTTCAAAGCCGATACGATCCG
TTTACGTTTTTGCACCCATGAAGGGGCGGTGTGGTAGACGTGTCTTGGCA
TCATCGTTCAATCCTAAAACCGGGTAACTAAAACGCCTCTATGAGATTTC
CAGCTTAGAGTGTCGGGGCGTTGACCGCCCGGCGTACAGTCTGTTTGTGG
GATGGTGTTGCTCTTGGCCTTCACAAGACGGTGTGTTGATGAACGACTAT
TAAGGGCGCTTGGGGGCTTTCATGCTGACATGTTGACGGTTTTTTACGAA
TTTGGAGTGCTTGCCTTGACGAGGGATGAATACAATCGGCAACCAGCTGC
GTCTTTTTTTTTAGCGATACACGTCCTTGAAATCAAGGAACCACAAAAGC
GTGTACATGTAGCAACGCAACAACACAACAAGTGGCATCAAACCGCGCCA
CCCCTCCCCGTCCTTTCAAAAACGCTTTCGTAAAATTGCATACTGCTTAA
AAAAAGTATGACAGTCTTCCAGAACGCCTTCTTACAACCGAACACTGATA
TGCACTTATGCAAGAACCCATTATACATGTCTGTAGTGACCGTTACAAGG
TTCCGATCGAATCCTACGAAATATACTGGATCCAGTAGTGGGTGATGACC
GTCGAAAATATTGAAGTGTTCTCCATGTTGCAGGCATTTTCTGATATTTT
GTCCAAATTACTTTTGGTGCCTCTGCGAGTTACCTCTTCTCGACAAGCAA
TTATTTCAACAGTTCCGTATAGCATTTTTTTGCCTTTTCAAACACCAAAT
AATCTACAGTACAGTAGATCGTGCCGTAACTTCGCTAAACACCAAAGAAC
AAACACGAGTACCTCTGCACCAAAGAATCAAGAGAGTACCTCCTCAATCC
ATACCTTGTTCCAAAAAAATGTTTCTAGCATCACTCCAGCACGACCTGCG
AAGTACAGAGTACTTCCAATAATAAGATGTGTGTTATCCCTAACGTAACG
TCCTTCCCACAAAAGAAGAAGAAtAAAAAAGCATAATGGGGACAGGCCTA
GTCTCTAGCATCACTCCATTTTTATACGGGAGCACGAGCCGCGGAGTACA
AAGTACTTCCAATAAATAAATGTGTGTTTTCCCTAACATATTATCCTTCC
CATGATTAAAAAGAAACCTCGTGTGGTGCCCCCTTTTACTACTAATACGA
TCTCTGCTGGGCTTTTACTTTAATGTGCACCCTTTGGACGACACGCAGTG
CTACCGTCCACCAGGAGCGTGGCTTACAAGGGAAAACAGCCCTCCACCGA
GGCAGCTTCGTTTGTGGCCCCCAATGCATCAGTCATCGGCAACGTCAAGG
TGTGTCCATGGATTCAGGTAGTGCCGCGCCCCAACTCGATGGGTAGATAG
AAGCAACGGTGGCAAAATGGGGGGGGCAGGCAAAAATATCTATTAATTTG
TATCATTTTTTGTCGATTCCCCGAGGGGCGGGCGGAGGGTCTGCTTTCAT
TTTTTTCAGTCTAAAATTAAGTCATTTCCAGTTTTCCAGGCGGAAGCTGC
TGGTACGTTTTCCCTGAAATCCAAATTGGAGTCATTGACAGCCCTGACCA
TGGGTTTCCACGGGCGCTTTACGTGCAACAGTTTCTATACTTTAACGTAA
TGCTTTGGTCAACTCAACGGAACCTTAAAGCTAAAGTACAATTATAGCGC
TGGCCTCCATTTTGTTTTCATCTCCCTTGTAGCCGATGGTCCCTCAATGT
TACCATCCTGCCTGTGGTCACTAAAAATCTTCCCATCTCTCCCCGGTTCA
CGCCTTAAGGTTTTTTATCGAGATACAAGTTCAGCACTCTTACAACTCCT
CAAACCAATAATATCAATAGATGAATTTTACTTACATTACTCGCGTTCCC
ACGCTTTCCGTTACAGAAGAAAGAACACAAATCCTACTTTGGTAAAAATC
GGACTCACGACTTCCGCACTAGCAGGTGTGCAGGTTACCTACTAGGCCAC
TCGGGCGATGAGTGCATCCTAATACCCCACATCGCACGTTCCCTTTTGGC
GCCTCGACTCCCTCGTCCTCTGTAACATAAGTCACGAATCAGAAACGAAT
GACTACCGAGCCATAACTCTTCGTTTCCCGCTCCGCAAATGCCAAGTGCA
TCCGAATCCCGTCTCTCCTTATCTCCCAAGTTTCTTTGCCACGTTCGAAA
TTCCACATCCCTGAGGTCACAACCGCCATCTGACAACCCCTCTCATGGCT
CGCGCTTGTTCCCCATCCCTATCTTCCTTCCGGTTGCCCGCACCGCTCAT
CCCACGTTCCATATCCGTGCCAGGTGGGCGCTGGGTCGTCACTATGGTAT
GGTTCCGTGGTACGAGGAGACGTGAACCATGTGGTGATCGGAGAGGGAAC
CTGAATCGGAGATTCTGCGGTAGTGCACGTCGCCGGACTGGCGGGGAAGA
TGCCTTCCGTCATCGGCAACAACGTTGTCATCGGTACGCACTCTTCTTCC
CTCAACAGTATCTGTACTTTTTCCTTAGCGTTATTCAATGCTTTGTTTTC
TATCTATAATTTTGACACTTTTCCAAAACGTTGAGCTTCTCTCTTTGTAT
TTTGATATTATATATTAATAGTACAACAATCTCATCGTGATTCGGTACGT
TATTACTCTATATCTGGTCATATTTGATGCGTTCTTCGAAGAACGTGATT
CGGTACTTGTCAGCGACGTGCTCTCCTTGTCCACCGCCGTTTTTGTGTTG
TCTTCAACCAATTTTACTACAGTTTCCACGTTTGTTTGTTTTTTTGTACG
GTACTTCTCGAAGTAGAACCGTTTTGCTTTTTTGAGAAAATCTGCCTACG
CGGTGTTTTGGGGTTTTCGCTCATCAGAGCATCATCGCTCTATTGTACTG
TACCGCTCGATCGACGATCGAGAGGCTACTAACTACTTCAGATTTTACTA
TCGTTGACTTTGCTGTCAACGTTATTGTCGACTTTGCTTTCAACCTTTCG
TCAACCTTCTCACTACTGGTAACGTTCTGTCAACTATGATGTCAATATTT
GCTAAACCGTGCTGCCAAAGGTCCACGGGCTACCATCCACGCATGCACGC
TGGAGGATGAGTGCATGGTGTGCGCCGGTGCGACGGTGATGGACGGAGCT
AAGGTGTCGAGCGGGGCTATGGTCGCACCAGGCGCCACCGTGTCTCCCGA
CACTGACGTGCCCGCCGGACAGGTGAGGCTATGGAAGATGAGATGTCAAA
AGCGGGACGGAAAGAGATGGGATGGGTTTGGTATGTGGGATGAGGCGTTT
GCGCCTTAACGCTACCGAGATATTTTCAGGTTTTTGTTTTGGTTGCTTTT
GATTCTAAAATCAAGTAGCTCTTGTAAGTTTACCGCCGAGATTTTGCTCT
GAAAGTTCTGCTGCCCACGGTGCGGTGCATTTGATGTTGAGCGTGTACGA
AAACTCATGTGGGGCTAAGGCCGAGATGGTGCAGAATACGGTAGAATTTG
ATAGTACGAAATGGCATGGGATTGGATGGGACAATATGGAACCGGACCCG
ACCCGGCTGAGTTTGCGGCGGGGTTCCAATGCAATATTGCGTGTTTTTTT
CCATGTATGACATACCTTTCTATTTTAGTGTACCTTTTGTATCCTGAAAT
AAGGTACAGTATACTAATGAGCAGGAGTTGTGTGGAACGTTTGCCTTGGT
TTTTCTTCAATTTATTATATACCTTTTATTTTAGTGTACCTTTTATATCC
TGAAATAAGGTACTGTATACAAATGAGCAGGAGTAGTGTGGAACGTTTGC
CCTGGGTTTTTTTTTGCTCGATACTTGTAAGAGTCTCGGTTCCAACCTAC
CACTCCATACTGTAGATACGTCCATACATACATACATACATACAACAGCT
GCAGTACAACTAAAGGTGTTTTTCCTCAACCGCGGCAACGTTACAAAGCT
AGCAACATTACGAAGCTGGTTGGTCCATATATCCCATTCATCCCATTTAT
TCCCGGGAGTGTTAAAGGAACCCTCGACTCGACGTCCCCGATCCCCGTCC
TGCTGTCGCATACTGTACTTGTCTCGTATACTGCTGTTTGTAGCTTTGGG
CTGGAACTCCAGCGGTGTACGTACGGGATCTCTCCGAAGACGAGGTGGTT
TCCATCACCAACATGGCGATTGACAACCAGGTACAGTACCTCAACATTTT
CTTGAGTACTATTATTGATTATTTTTCCCTTTTGTTATTTTTCCTAGTTT
TTTTTTTTAATCTTGTTCTTTTCGTTTTATGCACTCTTCTTGCCTGCTAT
ACTTTCCTTTTCCGCCTTTTTCTATTTCTATTTTCCTTTTTTTGTCCTTT
TTTTTCTTAACTCACACCCCCGGGCATGTTTCGCCCTCAGAGTTCACTCT
ACTTGACTTGGATTTACTTTAAAACGGCAAAGATGTGATTCTATTATGCC
GATAAAACTACTCGGCACTAGAATGCACACTATTATAATAGTTCTAGGCC
TAAGCCTAGTGTATGTGTGTGTGTGTGTGTGTTTTCTTCCCTTTTATTCT
GGACGTCAAGCTTGTGGACGTACCAGCCGGGGTCGCACAGGATTTCTCAA
CCACCTGCCTTCTGCGGTGCTTGTCTTAATTTTGTCGCGAAATTGATTCA
GCCATCCCTTTCCCTCGTCGACCGTGAAGTATACCGAATTTTGTGTACCC
ACGAATTGGAGCCTAATCGTTCTCCACTTTTTGGGCATTTTTTAAAAGAG
ACTAATTTGTGTAATGCCATACCATACCATACCATATATGTTATCCTTAG
CGTGGCTCTCGCCTCCGTGATACCGTACATTTCCCCATTGCACTCTAACA
TGGTATTAATAACGTACTCTACTGTTCGTGACGTTTCCGCCCATGGATCG
ATTTTTATCCGTCACACTCTATCTTTTTTAATCCTCGGGGGGGGGGGGGG
GGGGATCCAGGAAATGTCGCTAGTGCACGCCTCGGAGTGCGCCAAGGGTC
CCCTGGAGATCGAGCTGGACTTGAGGAAGTGGAACGAGAAGGCCAGCCGT
GACCCTACGTGAGTGCACGCTCGATCGTATGTATATATGGTCACACATAC
AGTATAGCAAGAGTATGGATCAACCGGGTATGGTTGCCAACCCTCCTCGT
GGTCAGCTGAACAGGGAAAATAAATGTTTCCCTGTCCGCGTTCGCGCCGC
CTGAGAAATTGGTCTCGCGAGATGGGTTCGGCAGTCCCGTCCCGCGTCAG
CCTGCTCATCTCCATACTCAAGCCGAATCTGGTTCTTACTTAAGGGATTC
CTCCCGAGTTCAGCGGCGGCGTCCATCTATTTATTTAAAAACCGCCATAT
GCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACTGGTG
GCCTTCACTGCCAAGAGTCCGCCGGCACAGAGCCAGTAAACCTCAAGGAA
GTTCCGAACGAGTGTTGCTTTGAACCGGAAACCCATGGACTATGACCGAT
TGATATGCGCCTCTCTTTACCCACACCCACTATTGGTATGAAGTAGTCAT
AGCATGTTGAGAGTTCAGTACCGGCTCGCATATACGATTAATATCTTAAC
ACCTCTATGAATAGTATGTATGTATGTATAGAAATAGTCACACATATAGC
AAGAGTTTGGATCAACCTGGTAAGGTTGCCAATCCTGCTTGTGGTCAGCT
GAACAGGGAAAATAAATACTCCCCTGTCCCCGTGCGTGCCTGAGAATTTG
GTCTCGCGAGACGGGTTTAGCCGTCCCGTCCCGCGTCAGCCTGCTCATTT
CCACACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTAT
AGTATGAATAGACGATGCATTCAAAATTGACTGTATATTATATACTGTAC
ATATTATGTGTACTTTTCTTCGACAAACATAACTCGTAGCCTGTGTTGTT
ACGGAGACGTGAAAGTACTTACTATTAATAGTATTATTTAAAAGAAATAC
CTGAAAGCATCTAGATCTTCTGAGCTCTAGTGTCCGATTTTTCACACCTC
CCATTGTATATATATATACATCGCCGGTACTTTCAACATGCCCACTTCAT
ACCAACAATGGTATAGTGGGTGTGGGAAAGAGAGGCGTATATTAATTGGT
CATAGTCCATAGTGACCTGCTAAGGCAGCACTCGTTCGGAACTACCTTGA
GGTTTACTGGCCCAGTGCCGGCGAACTCTCGGCAGTGAACGCCATCGGTA
CGCAATTGCGTGACCTGATAAACTCGGGACTGACCCGATGAAGTATGGCG
GTTTTATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAA
GCACCAGATTCAGTCTGAGTGTGGAAATGAGCAGGCTGACGCGGGACGGG
ACGGCTAAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACA
GGGGAGTATTTATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAAC
CTTACCCGGTTGATCTATACTTTGCTATATGTGATGACCATACATACGTA
CATACATATTAGAGAGTGCTTCGGGAGGAAAGCTGTTGCATACACAGTAA
AAGCTTGTTACTGTACATGTACAACTGAAGAGCTTTTGTATTTGCAGCCT
ATGATCTCACCTACCTGGTAAACGTTTTGATATTTTCCCCTCTGACTAGG
GGATGCTCTGAAGGTCTAAGCGTTCAGGTGTTTCTTTTAAACTCAAAATG
TCTATCATAGATGCGTTCAGATTTTTCTTTAATAAAATATATCGCGATCA
CGAAGGACTGATTAAACATTTTCCCTGCTTCATCTTTTCCGTAATTACTG
AGAAGAACTATCGTATCTACATTACAGTATAGAATATAGTATAGTATAGT
ATGTACAGGGTATTCATCAGCCTTTCCACGCACGGTGAAATCGAAACGGC
TTTTTTTTTCTACTCCGGTACGAGTACCGTAATTATCCAATAAGCTTTCA
CTTGTGTGGGATGTAGCCAATCAAAAGGCGGCACAAGCGGGAGTATCACT
TGGGAGTTTGACGCGGGGTGTCTCTCGAGACTTTTTGACGGCATGGAAGG
GACAAGGGAAGGGAAGGGAAGGGTTGATGGTTTATTGTTAGTGTAGGACG
CGTAAGTTTTTGGGGGCATCGTTGGTTTGGTTCGATCCATACGCGCATGT
TGCCTCTTGGTCGACATCATATCCCTTATCCTTACCACATAATATCCCAT
ATCGTACCCCGTCATTTTTGCTATATCGCACCATATTATAGGCTATATCG
TACTTCAGTTGTCCTATCGTACCCGTATCGTGCCATACCATTTACCATAT
GCCATATCTGACGCATTCCTCTTTACAAAGTAAAACTATTCAGCTGCCTC
GCCTCATGGGAGAAAATAAAGTTGTGTCCAAATTCCCGGCGCCCCTATCT
CCTGTATCCCTCCAAAATATGGAAAACCATAGTGTGGAGAAAAAATGGGT
CAAACCGCCCAAAGTTCACGGCGAGAAAAGCCGTGGCGTTATTCATTTTA
CAGTATTGTAGTGTTGGTGATAGATACCCCCGCTGAAAAAAATCGCCAAT
AAATAACACGCTCTCTATTTTTAGTACTATTAATACTAGGACAAATATCC
TTTGAAATTGACTATTTAAATGACAAGAAAAAAAGTTATATTACACGCTC
TCTATTTAATACTACTAGGACAGTTACCCTTTGAAATTGATTATAGTGAA
GAGGGCCTTATATAAATATTTTTGAATAACTCTTAAAAGACAAAATTGAC
GTGTCTCGAATGCATTTGCACTGTGCTCTTCTGTGTGCTTGGTGGGGTCA
GCTACGTGTTTCAGGTGCCTCCCGAGGGCGACGACAACCTCGCTTACAAT
GACGTCGAGGGGCAGGGTGTGCCCGGCAGGGTTTTCAACACCAATCTTCG
CTCCCCCGACGTGGAGCCCTTCGAGCGTGAGTACGCAGGCGACGTC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1164:252141..265336+

>mRNA_F-serratus_M_contig1164.1354.1 ID=mRNA_F-serratus_M_contig1164.1354.1|Name=mRNA_F-serratus_M_contig1164.1354.1|organism=Fucus serratus male|type=CDS|length=1032bp|location=Sequence derived from alignment at F-serratus_M_contig1164:252141..265336+ (Fucus serratus male)
ATGCCTTCCGTCATCGGCAACAACGTTGTCATCGATGCCTTCCGTCATCG
GCAACAACGTTGTCATCGGTCCACGGGCTACCATCCACGCATGCACGCTG
GAGGATGAGTGCATGGTGTGCGCCGGTGCGACGGTGATGGACGGAGCTAA
GGTGTCGAGCGGGGCTATGGTCGCACCAGGCGCCACCGTGTCTCCCGACA
CTGACGTGCCCGCCGGACAGGTCCACGGGCTACCATCCACGCATGCACGC
TGGAGGATGAGTGCATGGTGTGCGCCGGTGCGACGGTGATGGACGGAGCT
AAGGTGTCGAGCGGGGCTATGGTCGCACCAGGCGCCACCGTGTCTCCCGA
CACTGACGTGCCCGCCGGACAGCTTTGGGCTGGAACTCCAGCGGTGTACG
TACGGGATCTCTCCGAAGACGAGGTGGTTTCCATCACCAACATGGCGATT
GACAACCAGCTTTGGGCTGGAACTCCAGCGGTGTACGTACGGGATCTCTC
CGAAGACGAGGTGGTTTCCATCACCAACATGGCGATTGACAACCAGGAAA
TGTCGCTAGTGCACGCCTCGGAGTGCGCCAAGGGTCCCCTGGAGATCGAG
CTGGACTTGAGGAAGTGGAACGAGAAGGCCAGCCGTGACCCTACGAAATG
TCGCTAGTGCACGCCTCGGAGTGCGCCAAGGGTCCCCTGGAGATCGAGCT
GGACTTGAGGAAGTGGAACGAGAAGGCCAGCCGTGACCCTACCTACGTGT
TTCAGGTGCCTCCCGAGGGCGACGACAACCTCGCTTACAATGACGTCGAG
GGGCAGGGTGTGCCCGGCAGGGTTTTCAACACCAATCTTCGCTCCCCCGA
CGTGGAGCCCTTCGAGCGTGAGTACGCAGGCGACGTCCTACGTGTTTCAG
GTGCCTCCCGAGGGCGACGACAACCTCGCTTACAATGACGTCGAGGGGCA
GGGTGTGCCCGGCAGGGTTTTCAACACCAATCTTCGCTCCCCCGACGTGG
AGCCCTTCGAGCGTGAGTACGCAGGCGACGTC
back to top