prot_F-serratus_M_contig1162.1346.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1162.1346.1
Unique Nameprot_F-serratus_M_contig1162.1346.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length234
Homology
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BLAST of mRNA_F-serratus_M_contig1162.1346.1 vs. uniprot
Match: A0A7S1TE68_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE68_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 1.470e-10
Identity = 49/122 (40.16%), Postives = 58/122 (47.54%), Query Frame = 0 
Query:  113 DLPTQYDSPQDLSIFDDGVEFQDPVTRLCGKRRYRGMLLATLLFFRVACRPGSSYFKVLEIDRSSQQTIRTVWET-GATVWNGRELFISGVDTFTVNGGGL------ITRHDSAWDQSWEQV 227
            DLP QY    D SI+ D + F DPVT L GK RYRGM+    L   VA  P +  F V  I       + T W + G T W G  + ISG D F + G         + RH S W QS  QV
Sbjct:   50 DLPRQYRHDLDWSIYADDITFDDPVTHLRGKLRYRGMIAVLRLLVAVAFVPHTCTFLVQRISWDVSH-VTTDWSSSGQTRW-GSLVNISGTDIFHLTGPNKTSNAYQVRRHQSTWHQSPLQV 169
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1162.1346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1TE68_9RHOD1.470e-1040.16Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018790Protein of unknown function DUF2358PFAMPF10184DUF2358coord: 105..216
e-value: 5.3E-14
score: 52.5
NoneNo IPR availableGENE3D3.10.450.50coord: 99..227
e-value: 1.5E-6
score: 30.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..233
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.657
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 118..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1162contigF-serratus_M_contig1162:143732..171172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1162.1346.1mRNA_F-serratus_M_contig1162.1346.1Fucus serratus malemRNAF-serratus_M_contig1162 143292..171242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1162.1346.1 ID=prot_F-serratus_M_contig1162.1346.1|Name=mRNA_F-serratus_M_contig1162.1346.1|organism=Fucus serratus male|type=polypeptide|length=234bp
MPKSRCWSWSTLAVGLLRVQNTQALVADSFLPAVRHQQHRSDVIDEQVNR
NFAVFDTIRSSAVLTGKRRKSSKKDAVRKFRDGNHGVCFGFNVDGEGVSE
ATMERLTQTLKVDLPTQYDSPQDLSIFDDGVEFQDPVTRLCGKRRYRGML
LATLLFFRVACRPGSSYFKVLEIDRSSQQTIRTVWETGATVWNGRELFIS
GVDTFTVNGGGLITRHDSAWDQSWEQVRKQVIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358
IPR032710NTF2-like_dom_sf