mRNA_F-serratus_M_contig1160.1333.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 8.250e-150 Identity = 263/437 (60.18%), Postives = 320/437 (73.23%), Query Frame = 1
Query: 283 PSGSAPTSPGSLSQVVLKFTTVADGNETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDGAFHVQDRGHPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTKDIDGERGMLLEIVEGPLKGETRKVLRDGATLGRATENTIS---IADRELSRYHSTVECEYRRRTR--------------AGSSGDSASSERVAVG------AEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALEEAAPRVADALREDKAAERESLFGS-GGGPEAKRCEDRDLEDRVECRSDHHHLDGGGSGAGAYEEGGWGWKPPAPFASGXXXXSRGVRVPPLP 1521
P+G+AP++PGSLS+V+LKFTTVADGNE SF+V R+GA +GRG+ NDI IP+D CM +S+HASI+WR+GAFHV+DRG PYGAS+RIGTG G+RDWPL +G+MFSAGNSVF+T +ID ++GMLLEIV GPLKG+ R+V +DGA +GRATE+TI IADRELSR HST+EC+ R+ AG D S+E G AE +G+ G G EFYLCDVGSTNGTYVQLVGPYA+SRRL+LSDHIL+GRTGFS+NR+DWGVWEDRGARR+MEDKSVVIQDM VE LTSLGLGPQTF+AVYDGHGG EAS FLW+RLH+A+AEALE++A R+ +AL++D+AAER + FGS GGG +A RC+D D + A G GW P A F+S S G PP P
Sbjct: 313 PAGAAPSAPGSLSEVILKFTTVADGNEASSFTVKREGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTIRHIIIADRELSRNHSTIECDDNARSLCSSGWASSGDGGADAGGGDDRRSAEAKKDGMLDLSTAESVDGKSGQGEAGGGRTEFYLCDVGSTNGTYVQLVGPYANSRRLQLSDHILIGRTGFSINRYDWGVWEDRGARRSMEDKSVVIQDMGVESLTSLGLGPQTFLAVYDGHGGGEASTFLWQRLHVAIAEALEDSASRIEEALQQDRAAERLATFGSSGGGGQATRCDDWDGD--------------------ATTPAGGGWTPSAVFSS-----SNGGPTPPNP 724
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.340e-78 Identity = 150/323 (46.44%), Postives = 200/323 (61.92%), Query Frame = 1
Query: 316 LSQVVLKFTTVADGNETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDGAFHVQDRGHPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTKDID--GERGMLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLG-LGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALEEAAPRVADA 1275
+ ++VLKFTT++DGNE SF + +G IGRG N + +PSD +A+ HA + + +G F + D Y A++R+G G + WPL + + FS+GNS+F D++ + L + GP KGET V +DGATLGRAT+NT+ I DRELSR HS RV+ EGD FY+ D+GSTNGTYVQLVGPYA L L+DHILVGRTGFSVNRFD+G+ E+ G RR+MEDKS+++QDM V L++L PQT++ +YDGHGG EAS FLW++LH V +L AP + DA
Sbjct: 1 VDRLVLKFTTLSDGNEKASFCLDARGGTIGRGLENHVCVPSDTTLAKLRHACVEYSNGEFQLVDTSSDYHAAVRVGVGRAAQAWPLTKTAAFSSGNSIFEVVDVELHPTPAVSLAVRTGPRKGETLVVGKDGATLGRATDNTVCIPDRELSRRHS----------------------RVSFSKEGDV------------PSFYISDLGSTNGTYVQLVGPYAGRYPLHLNDHILVGRTGFSVNRFDFGISEETGMRRSMEDKSIMVQDMRVPELSALAPYSPQTWMGIYDGHGGTEASHFLWQQLHENVKNSLAMVAPMLNDA 289
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S1UBQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ7_9STRA) HSP 1 Score: 264 bits (674), Expect = 7.170e-76 Identity = 152/326 (46.63%), Postives = 196/326 (60.12%), Query Frame = 1
Query: 316 LSQVVLKFTTVADGNETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDG--AFHVQDRGHPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTKDIDGERGMLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALEEAAPRVADALRED 1287
L ++VLKFTT+++GNE P+F V GA+IGR N++S+P+D + HA I +R AF+++D GH +GA+IRI G GLR W L E ++FSAGNS F D +LLE+ GPLKGE R+V GATLGR N SI D+ELSR H +E E + D+ FY+CDVGSTNGTY+ LVGPY RL LSDHILVGRTGFSVNR+D+GV E+ G R++MED V+IQD+ + L + LGP F V+DGHGG SA+L LH +A ALEE A + A ++D
Sbjct: 168 LEEIVLKFTTLSEGNEAPAFLVGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCDAS-SVLLEVGSGPLKGERRRVGEKGATLGRHNNNEFSIPDKELSRRHCCIEFEPK-----------------------------DD-------SFYICDVGSTNGTYMHLVGPYRGLWRLSLSDHILVGRTGFSVNRYDFGVSEEMGRRQSMEDAHVLIQDLDLRRLNAGMLGPVFFAGVFDGHGGDATSAYLSAHLHANLARALEEEASTLVKAFKKD 456
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S2GBR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GBR9_9STRA) HSP 1 Score: 262 bits (670), Expect = 6.370e-75 Identity = 156/348 (44.83%), Postives = 210/348 (60.34%), Query Frame = 1
Query: 313 SLSQVVLKFTTVADGNETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDGAFHVQDRG-HPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTKDID-GERGML-LEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLG----LGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALEEAAPRVADALRED------KAAERESLFG 1317
S++++VLKFTT++DG+E SF V ++G IGR N+IS+PSD+ +A+ HASI DGAF + D + Y A++R+G G W L + + FSAGNS+F D+ G+ L + ++ GP K ET V R GATLGRAT NT+ I+DRELSR HS V +D DG+ FY+ D+GSTNGTYVQLVGPYA L ++DHILVGRTGFS+NR+D+ V E+ G R+TMEDKS+++QDM ++ L L PQT++AVYDGHGG +AS FLW+ LH AV +L P + A E+ +A +ES G
Sbjct: 11 SVTKLVLKFTTLSDGSEKASFCVDQRGGTIGRSPDNNISVPSDMTLAKVRHASIEHSDGAFELVDANTNEYHAAVRVGVGRSASAWLLAKDAAFSAGNSIFQVMDVQQGDNPRLTVTVLTGPRKNETLCVTRQGATLGRATVNTVCISDRELSRRHSKVS--------------------------------YDAVDGN----FYVSDLGSTNGTYVQLVGPYAGRYPLHVNDHILVGRTGFSINRYDFAVSEEMGMRKTMEDKSIMVQDMKIDALNELDAMMHFTPQTWMAVYDGHGGTQASQFLWKELHDAVVASLAIRGPLLVAAADEEARDTIVRAGLKESFLG 322
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S0XEJ1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEJ1_9STRA) HSP 1 Score: 261 bits (666), Expect = 2.080e-73 Identity = 144/312 (46.15%), Postives = 200/312 (64.10%), Query Frame = 1
Query: 316 LSQVVLKFTTVADG-NETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDGAFHVQDRGHPYGASIRIGTGCGLR-DWPLVEGSMFSAGNSVFYTKDIDGERGMLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEAL 1245
L+++VLKFTTV++ NE PSF+V KGA IG G+ N+I IPSD+ + + HA+I + G+F++ D G+ ASIRIG G G R W L + FSAGNSVF ++ ID + ++L+++EGPLK E R V + GA+ GR++ENTIS+ DRELSR HS +E + R V+ ++ +CDVGSTNGTY+QLVGPYA +L L+DHILVGRTGFSVNR+D+G+ E+ G R TMED ++Q + + L L PQ+F V+DGHGG +AS +L + LH+ +A+ L
Sbjct: 90 LNKIVLKFTTVSESCNEAPSFTVSTKGANIGSGSTNEIYIPSDLRLNKDAHATINYSKGSFYICDNGYDNPASIRIGVGTGHRMTWYLENNARFSAGNSVFCSEGIDEDGNLVLKVLEGPLKNEKRVVTKRGASFGRSSENTISVPDRELSRKHSRLEYDQR---------------------------VN---------KYLVCDVGSTNGTYMQLVGPYAGPFKLSLTDHILVGRTGFSVNRYDYGLSEEIGFRPTMEDACTIVQHLNISSLNVPSLSPQSFFGVFDGHGGNQASHYLSQNLHINIADGL 365
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S1XX31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.610e-73 Identity = 152/326 (46.63%), Postives = 196/326 (60.12%), Query Frame = 1
Query: 316 LSQVVLKFTTVADGNETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDG--AFHVQDRGHPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTKDIDGERGMLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALEEAAPRVADALRED 1287
L ++VLKFTT+++GNE P+F V GA+IGR N++S+P+D + HA I +R AF+++D GH +GA+IRI G GLR W L E ++FSAGNS F D +LLE+ GPLKGE R+V GATLGR N SI D+ELSR H +E E + D+ FY+CDVGSTNGTY+ LVGPY RL LSDHILVGRTGFSVNR+D+GV E+ G R++MED V+IQD+ + L + LGP F V+DGHGG SA+L LH +A ALEE A + A ++D
Sbjct: 168 LEEIVLKFTTLSEGNEAPAFLVGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCDAS-SVLLEVGSGPLKGERRRVGEKGATLGRHNNNEFSIPDKELSRRHCCIEFEPK-----------------------------DD-------SFYICDVGSTNGTYMHLVGPYRGLWRLSLSDHILVGRTGFSVNRYDFGVSEEMGRRQSMEDAHVLIQDLDLRRLNAGMLGPVFFAGVFDGHGGDATSAYLSAHLHANLARALEEEASTLVKAFKKD 456
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: W7U755_9STRA (Protein phosphatase 1b2 53 kDa isoform n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U755_9STRA) HSP 1 Score: 265 bits (676), Expect = 5.410e-72 Identity = 141/311 (45.34%), Postives = 198/311 (63.67%), Query Frame = 1
Query: 316 LSQVVLKFTTVADGNETPSFSVCRKGAAIGRGTHNDISIPSDVCMAQSDHASILWRDGAFHVQDRGHPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTKDIDGERGMLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALE 1248
+ +++LKFTT + E +F + + G +IGR N +S+PSD + + HA I ++ G+F++++ G + A+IR+G +RDWPLV G+ FSAGNS+F +I M+ E+++GPLKGE +V + GATLGR+ +NT+SIAD ELSR HS +E ++E DG ++YL DVGSTNGTY+QL GPYA + L L D I+VGRTGFS+NR+D+G+ E+RG R+TMED ++VIQD+ V L GL PQTF AV+DGHGG EASA+L LH+ + E LE
Sbjct: 491 VDKLILKFTTYSQDKEHSAFVIGKGGGSIGRDVKNTVSVPSDSTLQEDSHAFIGFKAGSFYIKNLGVTHCAAIRVGAEPVVRDWPLVRGATFSAGNSIFLVVEITPTE-MVAEVIDGPLKGERLEVSQKGATLGRSPDNTLSIADPELSRRHSRIE--------------------------------YEEKDG----KYYLSDVGSTNGTYMQLAGPYAKAYNLSLGDEIMVGRTGFSINRYDYGISEERGRRKTMEDHTLVIQDLGVRALKRFGLAPQTFAAVFDGHGGEEASAYLACHLHVNLREELE 764
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S4DEC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 217 bits (552), Expect = 1.660e-60 Identity = 115/207 (55.56%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 628 DGERGMLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALE 1248
D E + LE+ GPL+GE R+V R+GA LGRAT+N IS+AD+ELSR HS VE +D G G ++LCDVGSTNGTY+QLVGPYA+S +L SDHILVGRTGFS+NRFD+GV E+ G R MEDKS++IQD+ +E L LG+GPQ+FVAVYDGHGGA AS +LWR LHL V+EALE
Sbjct: 4 DAEPALFLEVTSGPLRGERRRVGREGAALGRATDNAISVADKELSRRHSLVE--------------------------------YDRGRG----AYFLCDVGSTNGTYMQLVGPYANSYKLTFSDHILVGRTGFSINRFDYGVSEEIGRRPNMEDKSIIIQDLGIEHLYQLGMGPQSFVAVYDGHGGAHASNYLWRHLHLNVSEALE 174
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A7S3YCX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCX7_HETAK) HSP 1 Score: 188 bits (477), Expect = 1.050e-51 Identity = 104/211 (49.29%), Postives = 131/211 (62.09%), Query Frame = 1
Query: 493 FHVQDRGHPYGASIRIGTGCGLRDWPLVEGSMFSAGNSVFYTK--DIDGERGML-LEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDM 1116
FH+ D G P GA+++IG G R+WPL+ S FSAGNSV + D++G+ M+ L I EGPLKGE RK+ ++GA LGRATEN +SI DRELSR HS + + RRR +FYLCDVGSTNGTY+QLVGPY RL L D++LVGRT FSVNRFD+G+ E+ G RRTMED+ + QD+
Sbjct: 6 FHLHDLGQPLGAAVQIGKGIEDREWPLIVNSAFSAGNSVLVVESADLNGDEPMIWLRIEEGPLKGERRKITKEGAALGRATENALSIPDRELSRRHSLIVHDPRRR------------------------------------QFYLCDVGSTNGTYMQLVGPYGRPYRLSLQDNVLVGRTCFSVNRFDYGLSEEIGMRRTMEDRYTLEQDL 180
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Match: A0A836CBM8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.100e-47 Identity = 110/214 (51.40%), Postives = 131/214 (61.21%), Query Frame = 1
Query: 643 MLLEIVEGPLKGETRKVLRDGATLGRATENTISIADRELSRYHSTVECEYRRRTRAGSSGDSASSERVAVGAEGDEGQVHDEGDGDGGLEFYLCDVGSTNGTYVQLVGPYASSRRLELSDHILVGRTGFSVNRFDWGVWEDRGARRTMEDKSVVIQDMCVEPLTSLGLGPQTFVAVYDGHGGAEASAFLWRRLHLAVAEALEEAAPRVADALRE 1284
M + GPLKG+T V GA LGRAT+N SIAD+ELSR HS +E E D D EF+LCDVGS NGTY+QLVGPYA+ RL LSDH LVGRTGFSVNRFD+GV E G+R +MEDKS +IQDM V LT L PQTFV V+DGHGGA+AS +LW LHL +A++L+ A ++ A E
Sbjct: 175 MWIHAKTGPLKGQTLTVTEAGAALGRATDNDASIADKELSRRHSRIEY---------------------------------ESDLD---EFFLCDVGSLNGTYMQLVGPYANKYRLGLSDHFLVGRTGFSVNRFDYGVSERMGSRPSMEDKSTIIQDMAVAGLTGTHLWPQTFVGVFDGHGGAQASEYLWDNLHLRLADSLQARAGELSAAAAE 352 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1160.1333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1160.1333.1 >prot_F-serratus_M_contig1160.1333.1 ID=prot_F-serratus_M_contig1160.1333.1|Name=mRNA_F-serratus_M_contig1160.1333.1|organism=Fucus serratus male|type=polypeptide|length=798bp MARDDRSRPGQLGGREEDDVGQEEGRGGEDLSYEHALDDFGACGRGDRGEback to top mRNA from alignment at F-serratus_M_contig1160:94272..102138- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1160.1333.1 ID=mRNA_F-serratus_M_contig1160.1333.1|Name=mRNA_F-serratus_M_contig1160.1333.1|organism=Fucus serratus male|type=mRNA|length=7867bp|location=Sequence derived from alignment at F-serratus_M_contig1160:94272..102138- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1160:94272..102138- >mRNA_F-serratus_M_contig1160.1333.1 ID=mRNA_F-serratus_M_contig1160.1333.1|Name=mRNA_F-serratus_M_contig1160.1333.1|organism=Fucus serratus male|type=CDS|length=4788bp|location=Sequence derived from alignment at F-serratus_M_contig1160:94272..102138- (Fucus serratus male)back to top |