mRNA_F-serratus_M_contig1160.1332.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 338 bits (868), Expect = 3.410e-96 Identity = 223/364 (61.26%), Postives = 254/364 (69.78%), Query Frame = 1
Query: 1 PSRPLATAGLPAEGGGYGLRRNSAGGLKERRRLGAAVDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVE-EDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPA--------PVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREHGDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
PSRPLA+AGLPAEGGG + R +++ AVDRVI++VV+ AFLATDEEFLTT+ KP+SG+TATT ++LGDRFY FNVGDSRT+LCRAGRAE++SKDHKP+REDETERI+RAGGMVI +RVMGELAVSRAFGDRAFK+GIKAILRE D G DL D G AP +P G + AD + TM R S L XXXXXXXXXXXXXX XXX A PVTDP ALI A PEMLSCRITPEDEFVLLACDGLFDVF+SDEVV+IVR+E+R HGDTQRVCETL R+AI+ERY++DNVSVVLVVL KFW
Sbjct: 911 PSRPLASAGLPAEGGGGAVAREGMA----KQKAPTAVDRVIEDVVTAAFLATDEEFLTTASKPSSGSTATTAMVLGDRFYGFNVGDSRTILCRAGRAEVVSKDHKPSREDETERIKRAGGMVIQRRVMGELAVSRAFGDRAFKVGIKAILRE-------DGGHQHGSDLDDXXXX---XXXXGLNHTAPATGSPTNGGEAAEAL-----------AADHNSRTMGRGSSSGQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATAGVSRAKPVTDPTGALITAEPEMLSCRITPEDEFVLLACDGLFDVFTSDEVVRIVRKELRMHGDTQRVCETLVRRAINERYTQDNVSVVLVVLNKFW 1249
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.030e-47 Identity = 122/321 (38.01%), Postives = 161/321 (50.16%), Query Frame = 1
Query: 103 AAVDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREHGDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
A D ++ ++++F+ TD+EF+ T+G +G+TATTVL+LGDR Y NVGDSRTVLCR+G A +S DHKP+REDE RI+ AGG +IHKRVMGELAVSRAFGD FK GI IL GD+ P+ GR AD P TD + LI+A PE+ + + P D+F+LLACDGLFDV ++ E ++ EM HGD QR E L+R AID+ SRDNVS+++V+L++ W
Sbjct: 297 ALADEIVIGALTESFIYTDKEFMRTAGHAQAGSTATTVLLLGDRAYCGNVGDSRTVLCRSGEAVPLSDDHKPSREDEAARIKAAGGFIIHKRVMGELAVSRAFGDAEFKKGINEIL----------------------------------------------------------GDDAPTAGS---------GGR------ADNNPD--------------------------TDLSKPLIIAEPEVQAVTLIPADDFLLLACDGLFDVLTNQEACDLILAEMARHGDVQRAAEALSRNAIDDCGSRDNVSILIVLLRQPW 518
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7S1XX31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.940e-42 Identity = 121/327 (37.00%), Postives = 161/327 (49.24%), Query Frame = 1
Query: 94 RLGAAVDRVIDEVVSQAFLATDEEFLTTS--GKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREHGDTQRVCETLTRKAIDERYSRDNVSVVLVVLK-KFW 1065
RLG +DR + ++ + + TD + GK +G+TATT+LIL DR + NVGDSRT+LCR GR + DHKP+R DET RI+ AGG VIH RV+GELAVSRAFGD +K GI Q +V +D L R G L+ A+A D ++ A PE+ S ++ PEDEF++LACDGLFDVF+++EVVQ VR EM +H D Q+ E+L+R+AI ER RDNV++VL++LK KFW
Sbjct: 523 RLGGDLDRRVSHLMRRVYEETDGDISRKEDEGKNMAGSTATTILILRDRIWLANVGDSRTLLCRGGRVHAFTLDHKPDRADETARIKAAGGFVIHHRVLGELAVSRAFGDAEYKKGI--------------QQYVGQD----------------------------------------------------DLNSLRQGG--LMGGDAEA------------------------------DYSRPILTAEPEIQSLKLAPEDEFIVLACDGLFDVFTNEEVVQAVRAEMAQHQDAQQCVESLSRRAIHERNCRDNVTIVLIILKPKFW 751
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7S1V3P3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V3P3_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.090e-41 Identity = 110/336 (32.74%), Postives = 163/336 (48.51%), Query Frame = 1
Query: 64 NSAGGLKERRRLGAAVDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAG-RAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREH-GDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
+S G + + ++ +++ A+L TD++F+T P SG+TA TV+++G R ++ NVGDSR VLCR+G + ++ DHKP+R DE R+R AGG ++HKRVMGELA++RAFGD++FKMGIKA+L E ++ELA + G E + R L P L+ A PE+ S ++ DEF+LLACDGLFDVF S + + + R+E+ H G+ V L+ +AI R SRDNVS++++VL+ FW
Sbjct: 222 HSRGARSQGEQTEDPASELMRKILKVAYLKTDKDFITPKTAPQSGSTAATVILMGRRLFAANVGDSRVVLCRSGGQCVELTSDHKPSRPDEAARVRAAGGFILHKRVMGELAITRAFGDKSFKMGIKAMLEEDADELANNNGNAESE-----------------------------------------------------------QARDLTAP---------------------------------------LVSAEPEIASMILSHNDEFLLLACDGLFDVFRSQDAIALARQELIAHRGEPAEVARILSDQAIRVRRSRDNVSILIIVLRPFW 459
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7S0XEJ1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEJ1_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.020e-41 Identity = 115/319 (36.05%), Postives = 155/319 (48.59%), Query Frame = 1
Query: 109 VDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREHGDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
+D V+ + Q FL TD +F+ S G+TATT LILG R Y+ NVGDSR +LCR +A +++DHKP+REDE +RIR AGG VI+ RVMGELAVSRAFGD FK GI QG VE+DL T + G + T+ + LIVA P++ + I+ D+F+LLACDGLFDVF+ +++V V+ M EH D+QR C+ LT +AI +R SRDNVSV+L++L ++
Sbjct: 397 LDEVVIRSLKQTFLRTDNDFINKSTNSQHGSTATTALILGARLYAANVGDSRVILCRNFKAISMTQDHKPSREDECKRIRDAGGFVINNRVMGELAVSRAFGDSEFKKGI--------------QGIVEQDL----------------------------------------------------ATHQLREGVEI----------------------------------DTTNWNQPLIVADPDIQATNISENDQFLLLACDGLFDVFTPEDIVTFVKSNMEEHHDSQRCCQNLTYEAIRKRNSRDNVSVILIILNPWY 615
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A8J9T827_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T827_PHATR) HSP 1 Score: 165 bits (418), Expect = 3.400e-41 Identity = 112/336 (33.33%), Postives = 162/336 (48.21%), Query Frame = 1
Query: 85 ERRRLGAAVDRVID-------EVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAG-RAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREH-GDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
E+ RL A D+ D +++ A+L TD++F++ P SG+TA TVL+ G R ++ NVGDSR VLCR+G + ++ DHKP+R DE R+R AGG ++HKRVMGELA++RAFGD++FKMGIKA+L E +EELA+++ A AP L+ A PE+ S ++ DEF+LLACDGLFDVF S + + + R+E+ H G+ V L+ +AI R SRDNVS+++++L+ FW
Sbjct: 126 EQSRLNARQDQSEDAASELMRKILKGAYLQTDQDFISPQDSPQSGSTAATVLLFGRRLFAANVGDSRVVLCRSGGQCVELTSDHKPSRPDEAARVRAAGGFILHKRVMGELAITRAFGDKSFKMGIKAMLEEDAEELAQEE--------------------------------------------------------------------------------------------------AKDLTAP-------LVSAEPEIASMVLSHNDEFLLLACDGLFDVFRSQDAIALARQELIAHRGEPAEVARILSDQAIRVRRSRDNVSILIIILRPFW 356
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A836CBM8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA) HSP 1 Score: 171 bits (434), Expect = 4.350e-41 Identity = 118/318 (37.11%), Postives = 154/318 (48.43%), Query Frame = 1
Query: 103 AAVDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREHGDTQRVCETLTRKAIDERYSRDNVSVVLVVLK 1056
A +D ++ + +AF ATD+ F+ S P +G+TATT LILG R Y NVGDSRT++ R GR S+DHKP REDE ERIR AGG ++HKRVMG LAVSRAFGD FK GI GA P A G +D S G AP L+++ PE ++TP ++F++LACDGLFDVFS+ EVVQ V EM HGD Q+ CE++T +AI ER++RDNV+++LV+L+
Sbjct: 372 ALLDGLVKQAFMEAFKATDDAFIKDSEHPQAGSTATTALILGGRVYVANVGDSRTIITREGRVLAASEDHKPQREDEEERIRNAGGFIVHKRVMGNLAVSRAFGDAEFKRGI------------------------------------------GAHGPDADG-----LDSTSGG----------------------------CAP---------------------------------LVISEPEFTVVQLTPAEDFMVLACDGLFDVFSNVEVVQAVCAEMAVHGDAQKCCESITLRAIRERHTRDNVTMILVMLR 581
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7S4DEC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 162 bits (410), Expect = 1.480e-40 Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 100 GAAVDRVIDEVVS----QAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILRE 456
GA R++DE+V+ + F TDE +L TS P G+TATTVLI+G+RFY+FNVGDSRT+LCR G+ L+S+DHKP+REDETERI++AGG VIHKRVMGELAVSRAFGD+ FKMG++AIL E
Sbjct: 190 GAVPARLLDELVAAGVARCFRRTDEHYLNTSDNPQCGSTATTVLIIGNRFYNFNVGDSRTLLCRNGKVRLVSQDHKPSREDETERIKKAGGFVIHKRVMGELAVSRAFGDKEFKMGLQAILNE 312
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7R9ZGZ6_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7R9ZGZ6_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.380e-40 Identity = 110/322 (34.16%), Postives = 155/322 (48.14%), Query Frame = 1
Query: 106 AVDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAG-RAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREH-GDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
A ++ ++ A+L TD+EF++ P SG+TA TV+++G R ++ NVGDSR VLCR G + ++ DHKP+R DE R+R AGG ++HKRVMGELA++RAFGD++FKMGIKA+L E D D S G IA LT AP+ E PE+ S ++ +DEF+LLACDGLFDVF S + + + R+E+ H G+ V L+ +AI R SRDNVS++++VL+ FW
Sbjct: 92 AASELMRRILKTAYLRTDKEFISPKTAPQSGSTAATVILMGRRLFAANVGDSRVVLCRGGGQCVELTSDHKPSRPDEAARVRAAGGFILHKRVMGELAITRAFGDKSFKMGIKAMLEE-------------------------------------------------DSGDGSSGMNDSDIA--KDLT------------------------------------------APLVSSE-------PEIASMVLSHDDEFLLLACDGLFDVFRSQDAIALARQELIAHRGEPAEVARILSDQAIRVRRSRDNVSILIIVLRPFW 313
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Match: A0A7S4DCC2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCC2_HETAK) HSP 1 Score: 157 bits (397), Expect = 7.520e-40 Identity = 110/321 (34.27%), Postives = 142/321 (44.24%), Query Frame = 1
Query: 103 AAVDRVIDEVVSQAFLATDEEFLTTSGKPTSGTTATTVLILGDRFYSFNVGDSRTVLCRAGRAELISKDHKPNREDETERIRRAGGMVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDSCQDGDENEKEGAPPKAPGAAAPVAAGSPWADIDDASQGDEHPSIADRSQLTMRRDSGRSLLPPPADAAPXXXXXXXXXXXXXXPSXXXAAQAPAPVTDPEEALIVACPEMLSCRITPEDEFVLLACDGLFDVFSSDEVVQIVRREMREHGDTQRVCETLTRKAIDERYSRDNVSVVLVVLKKFW 1065
AA RV+ E + A+ D FL S P +G+TA L+LG + Y NVGDSR +LCR G+ + DHKP REDE RI+ AGG V+HKRVMGELAVSRAFGD FK G+ F D +D+ +G LI PE+L +TPED F+LLACDGLFDVF ++E V +V +EM H + R CE L+R+A+ ER SRDN++VVL+VL ++W
Sbjct: 26 AAYSRVVHEAIKSAYRDCDAAFLRESEHPQAGSTAAAALVLGKKLYMINVGDSRALLCRNGQLFAATVDHKPFREDEEARIKAAGGFVVHKRVMGELAVSRAFGDSEFKRGL----------------FTNTD-KDTSNNG-------------------------------------------------------------------------------------------------VLITCEPEILEYDLTPEDHFILLACDGLFDVFENEEAVALVLQEMAGHRNAHRACEALSRRAL-ERGSRDNITVVLLVLNEWW 231 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1160.1332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1160.1332.1 >prot_F-serratus_M_contig1160.1332.1 ID=prot_F-serratus_M_contig1160.1332.1|Name=mRNA_F-serratus_M_contig1160.1332.1|organism=Fucus serratus male|type=polypeptide|length=236bp MVIHKRVMGELAVSRAFGDRAFKMGIKAILREGSEELARDQGFVEEDLQDback to top mRNA from alignment at F-serratus_M_contig1160:85453..94239- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1160.1332.1 ID=mRNA_F-serratus_M_contig1160.1332.1|Name=mRNA_F-serratus_M_contig1160.1332.1|organism=Fucus serratus male|type=mRNA|length=8787bp|location=Sequence derived from alignment at F-serratus_M_contig1160:85453..94239- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1160:85453..94239- >mRNA_F-serratus_M_contig1160.1332.1 ID=mRNA_F-serratus_M_contig1160.1332.1|Name=mRNA_F-serratus_M_contig1160.1332.1|organism=Fucus serratus male|type=CDS|length=1416bp|location=Sequence derived from alignment at F-serratus_M_contig1160:85453..94239- (Fucus serratus male)back to top |