prot_F-serratus_M_contig116.1317.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig116.1317.1
Unique Name	prot_F-serratus_M_contig116.1317.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	122

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5KQ40_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ40_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 5.760e-55
Identity = 85/122 (69.67%), Postives = 94/122 (77.05%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ G SERDGQTLA + RCL+KDGDFPP MW +LM TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:    1 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGESERDGQTLAGVTRCLLKDGDFPPSMWWQLMLTAAYLFNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 122

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.250e-54
Identity = 85/122 (69.67%), Postives = 96/122 (78.69%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G +IE +RCDKGGE +G +FR  C  + I +EY ATNTPQQ GVSERDGQTLA + RCL+KDGDFPP MWGE+M TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:  112 MCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 233

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5K5H2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H2_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 2.050e-54
Identity = 88/122 (72.13%), Postives = 96/122 (78.69%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ GVSERDGQTLA + RCL+KDGDFPP MWGELM TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:   24 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 145

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 6.240e-54
Identity = 88/122 (72.13%), Postives = 96/122 (78.69%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ GVSERDGQTLA + RCL+KDGDFPP MWGELM TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 279

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5KV62_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV62_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 8.950e-54
Identity = 83/122 (68.03%), Postives = 94/122 (77.05%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G  I+ +RCDKGGE +G EFR  C  + I +EY ATNTPQQ GVS RDGQ+LA++ RCL+KDGDFPP MWGELM TA YL NRSPH  L GATPYSK+HN  PDL+GLR IGARA
Sbjct:   49 MCVAAAGGYWIKAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSGRDGQSLAEVTRCLVKDGDFPPSMWGELMLTAAYLLNRSPHLALGGATPYSKLHNKSPDLSGLRVIGARA 170

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 5.140e-53
Identity = 88/122 (72.13%), Postives = 96/122 (78.69%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ GVSERDGQTLA + RCL+KDGDFPP MWGELM TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 279

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 7.890e-53
Identity = 87/122 (71.31%), Postives = 95/122 (77.87%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ G SERDGQTLA + RCL+KDGDFPP MWGELM TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:  534 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 655

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5JPZ7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPZ7_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.270e-52
Identity = 81/122 (66.39%), Postives = 93/122 (76.23%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RI  +RCDKGGE SG EFR  C  + I +EY ATNTP+  GVSERDGQ+LA + +CL+KDGDFPP +WGELM TA  L N SPHS L GATPYSK+HN+ PDL+GLR IGARA
Sbjct:    1 MCVAAAGGYRIGTVRCDKGGENSGSEFRDYCKNSAIKLEYAATNTPEYIGVSERDGQSLAGVTQCLLKDGDFPPSVWGELMLTAANLLNISPHSALGGATPYSKLHNMSPDLSGLRVIGARA 122

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.530e-52
Identity = 87/122 (71.31%), Postives = 95/122 (77.87%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ GVSERDGQTLA + RCL+KDGDFPP MWGELM TA YL NRSPHS L GATPYSK+ N  PDL+GLR IGARA
Sbjct:  482 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARA 603

[Close]

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 1.540e-52
Identity = 88/122 (72.13%), Postives = 96/122 (78.69%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNGVSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGATPYSKMHNLEPDLTGLRAIGARA 122
            M VAA  G RIE +RCDKGGE +G EFR  C  + I +EY ATNTPQQ GVSERDGQTLA + RCL+KDGDFPP MWGELM TA YL NRSPHS L GATPYSK+HN  PDL+GLR IGARA
Sbjct:  158 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARA 279

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig116.1317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQ40_9PHAE	5.760e-55	69.67	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KF63_9PHAE	1.250e-54	69.67	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K5H2_9PHAE	2.050e-54	72.13	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCM0_9PHAE	6.240e-54	72.13	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5KV62_9PHAE	8.950e-54	68.03	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5K500_9PHAE	5.140e-53	72.13	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KT84_9PHAE	7.890e-53	71.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JPZ7_9PHAE	1.270e-52	66.39	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KVF6_9PHAE	1.530e-52	71.31	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJR8_9PHAE	1.540e-52	72.13	Integrase catalytic domain-containing protein n=11...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 8..59 e-value: 3.2E-8 score: 33.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..109 score: 12.901
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 7..118 e-value: 1.3E-17 score: 65.7
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 14..101
None	No IPR available	PANTHER	PTHR11439:SF265		coord: 14..101
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig116	contig	F-serratus_M_contig116:450263..450628 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig116.1317.1	mRNA_F-serratus_M_contig116.1317.1	Fucus serratus male	mRNA	F-serratus_M_contig116 450263..450628 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig116.1317.1 ID=prot_F-serratus_M_contig116.1317.1|Name=mRNA_F-serratus_M_contig116.1317.1|organism=Fucus serratus male|type=polypeptide|length=122bp
MTVAAPLGLRIENLRCDKGGEYSGQEFRTLCVGAGINIEYTATNTPQQNG
VSERDGQTLAKIARCLMKDGDFPPFMWGELMFTATYLANRSPHSTLEGAT
PYSKMHNLEPDLTGLRAIGARA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf