prot_F-serratus_M_contig116.1312.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig116.1312.1
Unique Name	prot_F-serratus_M_contig116.1312.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	302

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig116.1312.1 vs. uniprot
Match: A0A6H5JI08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI08_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.940e-73
Identity = 152/296 (51.35%), Postives = 202/296 (68.24%), Query Frame = 0

Query:    5 SGFGHLDSLVDDIKKKESDRVKASKLESHLRQLRLRAESDATEASQVKSELEAAQAERMSLQKRIGLLTRKNEDLATENAKLLEEKCDFQRSMANNEAKLKQDEDDLRRAQHEFVQDLEKANLAYSRNRAVMNTLLGRKGVGCAEVPSPDEVDNMKRAAAKTQEAILRAAELEARLQGVKAESLAFKKEAADSAQKLQALRKEFVSLQKVRNKTSAGASIGQSKSQRRGXXXXXXXKGRDYDMDNHRRQQQRISELEHEVAHLEETCSRQAEYIGQLEEYANSVEAANAQLMQQQQ 300
            +GFGHL SLVDDI KK+ +R+K   LES LRQ R+RA+++  +ASQ+K ELE A A+R+SLQ+ IGLL+R+NEDL  E AKL E+  DFQRSM NNEAKLK++E DL++AQ  FV+ LEK+N +YSR+RAVMNTL+GR G+GCAE+PSP+E++  +  AA       RAAEL+ARL  V+AES A K+EAA S++K Q LR+E  S +  RN     +S G  +  +                         I+ LE+E+A L +TC+RQ EY+ QLEEYANSVEA N  L ++Q+
Sbjct:    2 AGFGHLGSLVDDINKKDGERLK---LESQLRQQRMRADAEEAKASQLKGELEVASADRVSLQQEIGLLSRRNEDLIAEKAKLSEQSSDFQRSMFNNEAKLKENERDLKKAQRGFVESLEKSNASYSRHRAVMNTLVGRNGMGCAEIPSPEELEAFRGLAA-------RAAELQARLHAVEAESQALKQEAATSSRKQQVLRREIDSFK--RNGAGGKSSAGSPRVDKGSGKNKQQTXXXXXXXXXXXXXXXHITALENEIARLNDTCNRQMEYMSQLEEYANSVEAINEDLRKEQE 285

[Close]

BLAST of mRNA_F-serratus_M_contig116.1312.1 vs. uniprot
Match: D8LN29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN29_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 3.010e-65
Identity = 139/291 (47.77%), Postives = 182/291 (62.54%), Query Frame = 0

Query:    5 SGFGHLDSLVDDIKKKESDRVKASKLESHLRQLRLRAESDATEASQVKSELEAAQAERMSLQKRIGLLTRKNEDLATENAKLLEEKCDFQRSMANNEAKLKQDEDDLRRAQHEFVQDLEKANLAYSRNRAVMNTLLGRKGVGCAEVPSPDEVDNMKRAAAKTQEAILRAAELEARLQGVKAESLAFKKEAADSAQKLQALRKEFVSLQKVRNKTSAGASIGQSKSQRRGXXXXXXXKGRDYDMDNHRRQQQRISELEHEVAHLEETCSRQAEYIGQLEEYANSVEAANAQL 295
            +GFGHL SLVDDI K++ +R+K   LES LRQ R+RA+++  + SQ+K ELE A A+R+SLQ+ IGLL+R+NEDL  E AKL E+  DFQRSM NNEAKLK++E DL+ AQ  FV  LEK+N +YSR+RAVMN L+GR GVGCAE+PSP+E++  +  AA       RAAEL+ARL  V+AES A K+EAA S++K + L++E  S +                                                   +A L++TC+RQ EY+ QLEEYANSVEA N  L
Sbjct:    2 AGFGHLGSLVDDINKRDGERLK---LESQLRQQRMRADAEEAKVSQLKGELEVASADRVSLQQEIGLLSRRNEDLIAEKAKLSEQSSDFQRSMFNNEAKLKENERDLKEAQRGFVDSLEKSNASYSRHRAVMNNLVGRNGVGCAEIPSPEELEAFRGLAA-------RAAELQARLHAVEAESQALKQEAAASSRKQKVLQREIDSFK---------------------------------------------------IARLDDTCNRQMEYMSQLEEYANSVEAINEDL 231

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig116.1312.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig116.1312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JI08_9PHAE	1.940e-73	51.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LN29_ECTSI	3.010e-65	47.77	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..117
None	No IPR available	COILS	Coil	Coil	coord: 250..270
None	No IPR available	COILS	Coil	Coil	coord: 41..89
None	No IPR available	COILS	Coil	Coil	coord: 278..301
None	No IPR available	COILS	Coil	Coil	coord: 159..193

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig116	contig	F-serratus_M_contig116:252991..256159 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig116.1312.1	mRNA_F-serratus_M_contig116.1312.1	Fucus serratus male	mRNA	F-serratus_M_contig116 252991..256159 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig116.1312.1 ID=prot_F-serratus_M_contig116.1312.1|Name=mRNA_F-serratus_M_contig116.1312.1|organism=Fucus serratus male|type=polypeptide|length=302bp
MQHASGFGHLDSLVDDIKKKESDRVKASKLESHLRQLRLRAESDATEASQ
VKSELEAAQAERMSLQKRIGLLTRKNEDLATENAKLLEEKCDFQRSMANN
EAKLKQDEDDLRRAQHEFVQDLEKANLAYSRNRAVMNTLLGRKGVGCAEV
PSPDEVDNMKRAAAKTQEAILRAAELEARLQGVKAESLAFKKEAADSAQK
LQALRKEFVSLQKVRNKTSAGASIGQSKSQRRGDGGGDGGKGRDYDMDNH
RRQQQRISELEHEVAHLEETCSRQAEYIGQLEEYANSVEAANAQLMQQQQ
V*