mRNA_F-serratus_M_contig116.1323.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig116.1323.1
Unique NamemRNA_F-serratus_M_contig116.1323.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 5.520e-73
Identity = 183/411 (44.53%), Postives = 209/411 (50.85%), Query Frame = 3
Query:   24 LVLHSVGRDLGCEAALVERLGRLVCEGALIEIVDVHKEDIVLRRALWILSSSLAFPSTAASLRAGQESGLLDKLSLRDEETLLPVCLSPASTSRLRPTFETLEACLMEGRTLGFARGKGKDRSKSRRGPEYHHRTESLDPPLSLIGSP---------------------------ASDAKDVGATRSLEVLEAGTRGYACLFEAIGGAIQAVVNAEAKPFREARTELPTLKAASRWVAIETSWGYARALASELFRMKNNDA------GQHSSIATSAALPMDM-----SDIAVPRVTATEHLVNVNGDVAGVDGGKDRKNRASARPEDGERERLERKTANNNTEEPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQYAH 1142
            LVL S GR LG EA+LVERLGRLVCEG LIE+VDVHKED +LRRALW L++SL  P  AA LR GQE GL + LS  D+E L    LS  ST+RLRPTFETLEACL EGRTLG +R K K R  S                                                   S     G   S E L  G R Y CLF+A+G  +QAVV +EAKPFREAR  LP L+ A+RW AIE SWGYARALASEL   + NDA      G H + A   A  +D       + AV   +AT       GDV                                      D  YCICRGG+   GGVMV CD C EW+H SCVGL+     +L  Y CLVCCE+ P K+G Y H
Sbjct: 1179 LVLASAGRRLGFEASLVERLGRLVCEGVLIEVVDVHKEDTMLRRALWTLTASLCLPRAAACLRLGQEPGLEETLSPEDQEALRSNGLSQDSTTRLRPTFETLEACLTEGRTLGLSRTKSKGRRNSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSLPLAGERPSSEPLGTGVRLYNCLFDAVGDILQAVVRSEAKPFREARNNLPALREATRWAAIEPSWGYARALASELSWRRENDAPADVAAGVHVAAAAPMAAAVDSWSPAPGEPAVGAQSATVVQEEQGGDV--------------------------------------DV-YCICRGGD--DGGVMVECDLCGEWYHASCVGLTAQTAGELQQYRCLVCCEAHPEKHGPYKH 1548          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A6H5JSL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL4_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 2.000e-62
Identity = 177/424 (41.75%), Postives = 202/424 (47.64%), Query Frame = 3
Query:   24 LVLHSVGRDLGCEAALVERLGRLVCEGALIEIVDVHKEDIVLRRALWILSSSLAFPSTAASLRAGQESGLLDKLSLRDEETLLPVCLSPASTSRLRPTFETLEACLMEGRTLGFARGKGKDRSKSR-----------------------------RGPEYHHRTESLDPPLSLIGSPASDAKDVGATRSLEVLEAGTRGYACLFEAIGGAIQAVVNAEAKPFREARTELPTLKAASRWVAIETSWGYARALASELFRMKNNDA------GQHSSIATSAAL--PMDMSDIAVPRVTATEHLVNVNGDVAGVDGGKDRKNRASARPEDGERERLERKTANNNTEEPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQYAHSWTTNVAIEAAVRR 1184
            LVL S GR LG EA+LVERLGRLVCEGALIE+VDVHKED +LRRALW L++SL FP   + LR GQE GL + LS  D+E L    LS  ST+RLRPTFETLEACL EGR LG +R K K R  S                                                     S     G   S E L  G R Y CLF+A+G  +QAVV AEAKPFREAR  LP L+ A+RW AIE SWGYARALASELF  + N A      G H + A +A +   +D S  A    T       V  +  G D                                 +D  YCICR  EG+ GGVMV CD C EW+H                                 A  W+TNVAIEAAVRR
Sbjct: 1041 LVLASAGRRLGFEASLVERLGRLVCEGALIEVVDVHKEDTMLRRALWTLTASLCFPKATSCLRLGQEPGLEETLSSEDQEALRSSDLSQDSTTRLRPTFETLEACLTEGRALGLSRTKSKGRRSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSCLPLAGERPSSEPLGTGVRLYTCLFDAVGDILQAVVKAEAKPFREARNNLPALREATRWAAIEPSWGYARALASELFWRRENAAPAAAARGVHVAAAAAAQMVAEVDSSSPAPGEPTVGAQSARVVQEEQGGD---------------------------------VDV-YCICR--EGDDGGVMVECDLCGEWYH---------------------------------ASWWSTNVAIEAAVRR 1395          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: UPI001EE534B5 (PHD finger protein ALFIN-LIKE 7-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE534B5)

HSP 1 Score: 61.6 bits (148), Expect = 3.670e-7
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 3
Query:  960 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYG 1130
            YC CR  + + GG M+ CDGC EWFH +CVG++ +  + +D+Y+C  C     G  G
Sbjct:  114 YCPCR--QPDDGGFMIACDGCDEWFHGACVGVTETMAEAMDEYHCPTCGSGAVGPLG 168          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A6J8B799_MYTCO (CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B799_MYTCO)

HSP 1 Score: 62.0 bits (149), Expect = 7.260e-7
Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 3
Query:  960 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQYAHSWTTNVAIEAAVR 1181
            YCIC+G +   G  M+ CDGC+EWF+ SCVG+SP   ++L +Y C  C E++  K      + +T++ +  +VR
Sbjct:  156 YCICKGLD--IGDFMLGCDGCTEWFYGSCVGISPQEAEELGEYLCQTCKEAKETK-----GATSTSIKLRRSVR 222          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A6J8E9P9_MYTCO (CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8E9P9_MYTCO)

HSP 1 Score: 62.4 bits (150), Expect = 1.620e-6
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 3
Query:  960 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQ 1115
            YCICRG + +    MV CDGC+EWFH  CVG+SP   ++L +Y C  C E++
Sbjct:  283 YCICRGPDIQD--FMVGCDGCTEWFHGRCVGISPQEAEELGEYLCQTCKEAK 332          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A8B6DIH2_MYTGA (COMPASS component SPP1 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DIH2_MYTGA)

HSP 1 Score: 62.8 bits (151), Expect = 2.530e-6
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 3
Query:  960 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGK 1124
            YCICRG +   G  M+ CDGC+EWFH  CVG+SP   ++L +Y C  C E Q  K
Sbjct:  468 YCICRGPD--IGDFMIGCDGCTEWFHGRCVGISPQDGEELGEYLCKTCKEVQVTK 520          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A8B6HD80_MYTGA (Nucleosome-remodeling factor subunit BPTF n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HD80_MYTGA)

HSP 1 Score: 62.8 bits (151), Expect = 3.140e-6
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 3
Query:  960 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGK 1124
            YCICRG +   G  M+ CDGC+EWFH  CVG+SP   ++L +Y C  C E Q  K
Sbjct:  673 YCICRGPD--IGDFMIGCDGCTEWFHGRCVGISPQDGEELGEYLCKTCKEVQVTK 725          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A507CFN3_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CFN3_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 4.560e-5
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 3
Query:  951 DARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQ 1133
            DA YC+C+    E    MV CDGC +WFH  C+GLS +  D ++ Y C +C   Q G  G+
Sbjct: 1326 DATYCVCKSKYDEER-PMVQCDGCHDWFHLDCIGLSTAQADQMERYLCPICNPHQQGGVGK 1385          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A485KNS8_9STRA (Aste57867_9611 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNS8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.620e-5
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 3
Query:  957 RYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVC 1103
            +YCICR     + G M+ C+GC +WFHD+CVG+S    + +DDY C  C
Sbjct: 1154 QYCICRQ---PYDGFMIGCEGCDDWFHDTCVGISKEKAEKVDDYVCPSC 1199          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A1E4TSM4_PACTA (PHD-type domain-containing protein n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TSM4_PACTA)

HSP 1 Score: 57.8 bits (138), Expect = 6.280e-5
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 3
Query:  933 NTEEPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCE 1109
            NT E L   YCICR    ++G +MVCCDGC +WFH  C GL       + +YYC+ C E
Sbjct:   31 NTGEEL---YCICR--RPDNGELMVCCDGCDQWFHFKCKGLDLKLDKLVSNYYCIFCDE 84          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LN51_ECTSI5.520e-7344.53Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JSL4_9PHAE2.000e-6241.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001EE534B53.670e-742.11PHD finger protein ALFIN-LIKE 7-like n=1 Tax=Halio... [more]
A0A6J8B799_MYTCO7.260e-739.19CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
A0A6J8E9P9_MYTCO1.620e-650.00CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
A0A8B6DIH2_MYTGA2.530e-650.91COMPASS component SPP1 n=1 Tax=Mytilus galloprovin... [more]
A0A8B6HD80_MYTGA3.140e-650.91Nucleosome-remodeling factor subunit BPTF n=1 Tax=... [more]
A0A507CFN3_9FUNG4.560e-542.62Uncharacterized protein n=2 Tax=Synchytrium endobi... [more]
A0A485KNS8_9STRA4.620e-546.94Aste57867_9611 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1E4TSM4_PACTA6.280e-547.46PHD-type domain-containing protein n=1 Tax=Pachyso... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig116contigF-serratus_M_contig116:640366..647187 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score155.6
Seed ortholog evalue7.9e-35
Seed eggNOG ortholog2880.D8LN51
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K06101,ko:K07117,ko:K11423,ko:K11424,ko:K11728
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko05202,map00310,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000803,GO:0000805,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0007530,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009987,GO:0010452,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0018992,GO:0019222,GO:0019538,GO:0022414,GO:0030849,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0034968,GO:0036211,GO:0040029,GO:0042054,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046975,GO:0048519,GO:0048856,GO:0050789,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1081@2759,KOG1632@1,KOG1632@2759
EC2.1.1.43
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons7
Model size2972
Cds size1971
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929055.415241-UTR-F-serratus_M_contig116:640365..6410251622929055.415241-UTR-F-serratus_M_contig116:640365..641025Fucus serratus maleUTRF-serratus_M_contig116 640366..641025 -
1690962684.7780602-UTR-F-serratus_M_contig116:640365..6410251690962684.7780602-UTR-F-serratus_M_contig116:640365..641025Fucus serratus maleUTRF-serratus_M_contig116 640366..641025 -
1622929055.5160143-UTR-F-serratus_M_contig116:646199..6463121622929055.5160143-UTR-F-serratus_M_contig116:646199..646312Fucus serratus maleUTRF-serratus_M_contig116 646200..646312 -
1690962684.8319721-UTR-F-serratus_M_contig116:646199..6463121690962684.8319721-UTR-F-serratus_M_contig116:646199..646312Fucus serratus maleUTRF-serratus_M_contig116 646200..646312 -
1622929055.5366325-UTR-F-serratus_M_contig116:646629..6467201622929055.5366325-UTR-F-serratus_M_contig116:646629..646720Fucus serratus maleUTRF-serratus_M_contig116 646630..646720 -
1690962684.8388336-UTR-F-serratus_M_contig116:646629..6467201690962684.8388336-UTR-F-serratus_M_contig116:646629..646720Fucus serratus maleUTRF-serratus_M_contig116 646630..646720 -
1622929055.5547955-UTR-F-serratus_M_contig116:647050..6471871622929055.5547955-UTR-F-serratus_M_contig116:647050..647187Fucus serratus maleUTRF-serratus_M_contig116 647051..647187 -
1690962684.8459802-UTR-F-serratus_M_contig116:647050..6471871690962684.8459802-UTR-F-serratus_M_contig116:647050..647187Fucus serratus maleUTRF-serratus_M_contig116 647051..647187 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929055.4300199-CDS-F-serratus_M_contig116:641025..6421931622929055.4300199-CDS-F-serratus_M_contig116:641025..642193Fucus serratus maleCDSF-serratus_M_contig116 641026..642193 -
1690962684.7922094-CDS-F-serratus_M_contig116:641025..6421931690962684.7922094-CDS-F-serratus_M_contig116:641025..642193Fucus serratus maleCDSF-serratus_M_contig116 641026..642193 -
1622929055.4429634-CDS-F-serratus_M_contig116:643890..6439891622929055.4429634-CDS-F-serratus_M_contig116:643890..643989Fucus serratus maleCDSF-serratus_M_contig116 643891..643989 -
1690962684.8014078-CDS-F-serratus_M_contig116:643890..6439891690962684.8014078-CDS-F-serratus_M_contig116:643890..643989Fucus serratus maleCDSF-serratus_M_contig116 643891..643989 -
1622929055.4602222-CDS-F-serratus_M_contig116:644649..6451221622929055.4602222-CDS-F-serratus_M_contig116:644649..645122Fucus serratus maleCDSF-serratus_M_contig116 644650..645122 -
1690962684.808449-CDS-F-serratus_M_contig116:644649..6451221690962684.808449-CDS-F-serratus_M_contig116:644649..645122Fucus serratus maleCDSF-serratus_M_contig116 644650..645122 -
1622929055.4776244-CDS-F-serratus_M_contig116:645427..6456471622929055.4776244-CDS-F-serratus_M_contig116:645427..645647Fucus serratus maleCDSF-serratus_M_contig116 645428..645647 -
1690962684.8172553-CDS-F-serratus_M_contig116:645427..6456471690962684.8172553-CDS-F-serratus_M_contig116:645427..645647Fucus serratus maleCDSF-serratus_M_contig116 645428..645647 -
1622929055.4949622-CDS-F-serratus_M_contig116:646188..6461991622929055.4949622-CDS-F-serratus_M_contig116:646188..646199Fucus serratus maleCDSF-serratus_M_contig116 646189..646199 -
1690962684.8249393-CDS-F-serratus_M_contig116:646188..6461991690962684.8249393-CDS-F-serratus_M_contig116:646188..646199Fucus serratus maleCDSF-serratus_M_contig116 646189..646199 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig116.1323.1prot_F-serratus_M_contig116.1323.1Fucus serratus malepolypeptideF-serratus_M_contig116 641026..646199 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig116.1323.1

>prot_F-serratus_M_contig116.1323.1 ID=prot_F-serratus_M_contig116.1323.1|Name=mRNA_F-serratus_M_contig116.1323.1|organism=Fucus serratus male|type=polypeptide|length=657bp
MEGRTLGFARGKGKDRSKSRRGPEYHHRTESLDPPLSLIGSPASDAKDVG
ATRSLEVLEAGTRGYACLFEAIGGAIQAVVNAEAKPFREARTELPTLKAA
SRWVAIETSWGYARALASELFRMKNNDAGQHSSIATSAALPMDMSDIAVP
RVTATEHLVNVNGDVAGVDGGKDRKNRASARPEDGERERLERKTANNNTE
EPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYY
CLVCCESQPGKYGQYAHSWTTNVAIEAAVRRLTLKKTPKALAIGKTQTKN
RTPMFSTKAEGSSCATASCSNHATEVDEGGGSSVEGTDDAAVCSKTRLRD
MSSCAKDFPGAKRARAAAWISDFVERHHAELRMPWPIKPPPKASAEIQET
HETFFYQPLSDGGCVSNEGHDDGPHDEEDKEKTGDWKGNKMSRGSGQGAI
LPAFSALPSSTKEFLDLGLVTENADDERLPPSRVCPVRVNIWSEGDAGVR
DKHGSGGDSLSPFAMMLRNGDHNPYSDVQQTEQQQAEGGTSGTVSSSWIK
LPQCSPLGLAPYPTLHPVIDMNSYLASSSQVPINAAHMAHIPRMPVWSGG
AFSQIVASRYCVQGVNIQQDQLQSPVGVSTSAASAVAPTVMPSDNEASNA
PMPGMA*
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mRNA from alignment at F-serratus_M_contig116:640366..647187-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig116.1323.1 ID=mRNA_F-serratus_M_contig116.1323.1|Name=mRNA_F-serratus_M_contig116.1323.1|organism=Fucus serratus male|type=mRNA|length=6822bp|location=Sequence derived from alignment at F-serratus_M_contig116:640366..647187- (Fucus serratus male)
CACCGGCGGCCACGGGACGTGTTTTGGTGCTCCATTCTGTTGGACGAGAC TTGGGGTGCGAGGCAGCTTTGGTGGAAAGGTTGGGCAGGCTGGTATGTGA GGGGGCGCTTATCGAGATCGTCGACGTGCACAAGGAGGTACGGCTTAAGT TTGAGTACGGTTGTTTCATCCGATGGATTCGGCCGGTTGCAGAATATAGT TGTGATCGCGTGTTTTTTGTGGAGGGTTAGGGTTAGGGTAGGTCAATCCA GGACTCGATTGGGTCTACTGCCCACTTCCACTAGCTGCTATTGTGCAACT CATTTCGTATTACCTTACACTACATCCTATGAATATAGTTCGAAGTATTG CATGAACCTTTGCCTAGAGTACTGTATTTCTGACTGTTGGAGTGTTTTCA TACATACTCAAACCCCTTCTATTATCACCTCTACCACCACCTCTACTCTA CTGGCACTCTACTCCAGGATATCGTGCTGAGAAGGGCGCTGTGGATTCTG TCTTCTTCGCTAGCATTCCCTTCAACTGCTGCCAGTCTACGAGCAGGACA GGAGTCAGGTACATTAGCACAACGCTTCATACCCGGTACAGTTTAGACAG CGGAACTATAGTCATACTACCGTCTGTAGTACCAATAGCGAAGGAAGCAC AGCCCCTGCCATTGGTGCCATTGGTGGCCCTCACGTTGGAGTAGCGGTTG GTCGCTGTACAGCAGAGTCAACAATCAGCATGTATTGTAAATCTCATGTG GCTTTTCTTGGCCTGATGAAACAACGAATGATTGGACGCGGTACTGTACT GTAATAAATTAGTCATTCCTTTTTTATGTACTCCCGTCCATCGAATTACT GGTGCCTCGGATTCGCCACCAGCAGGCCTTCTGGACAAGCTTTCCCTGAG GGACGAGGAAACACTGCTGCCCGTTTGTTTGTCTCCGGCAAGCACAAGTA GGCTGCGTCCGACCTTCGAAACGCTCGAGGCATGTCTCATGGAAGGCCGG TGAGACTGCACCATAGGACTCCGTTGCTATTAACAGTCCACACACAATGT AATGCATTCGTCGTCCGAGTGGTCTAGTAGGTAACCTGCACACCTGCTAG TGCGGAAGTCGTGAGCTCGATTCTTGCCAAAATAGGATTTTTGTTCTTTC TTCCGTAACGGAGAGCGTGGGAGCTTGAGTAAGTAAAATTCAACCATCGG GTGACGATTTGTAAGATTACTGAACTTGCATCGCGATAAAAAATCGTAAG GCGTGAACCGGGGAGAGATGGGGAGATCCTTAGTGACCACAGGCAGGATG GTAATGATGAGGTCCATCGGCTATAAGTGTATGCAACAACTAAAATGACT GCCACAACCGTTGCTCTAAAACACGGGGTACTGCTATGTTTGGCATGGGT TACTGCGAGCACCTCCATAGTCGAGTAGCAGCCCATATCTTACCTGACGT TTAATGCTTTGTCCCAATGTATTGTCCCCTGCTGTTTCCCATCTCGTCGC GGGTGGGACGCTGCTTCATCTCCGACGGAAATCTGCCCAGAACTCTTGGG TTCGCTCGCGGCAAGGGCAAGGATAGGAGTAAATCTCGGCGAGGTCCGGA GTACCACCATAGGACGGAATCGCTCGACCCTCCTCTGTCGTTGATCGGAT CGCCTGCTTCGGACGCAAAGGACGTGGGAGCGACTCGCAGCTTGGAGGTC TTGGAGGCGGGTACGCGTGGGTACGCATGTTTGTTCGAGGCTATCGGCGG AGCGATCCAGGTGGGCTTGTCGACATTGCTCACCTCATATGTATCGTTAG AATCATACCTGAGGCGCTATTGTTAGTATAGTATAATGAGTTAAAGCCAC CACAGTGCAGTATAGCCACCTCAGTGCATTGTCCCCAATTGACTGTTGAG CGGGTTAGAATTAGGGTTAGGATTGCCGTTAAGGTTAGCGTCAGGGTAAG GGTTGTCGTTGCAGGAACCTAAGGGTGAGCGTGATGAACAGCACTCACCA TGTTATAGAAAAAGTTATCTCGCGCCTGACGTGGCATACATTATGTCCCA TGGCGCCTTTTGAAGGCTGTCGTCAACGCTGAAGCGAAGCCTTTCCGGGA AGCGAGAACCGAGCTACCGACGCTGAAGGCGGCGTCACGATGGGTCGCCA TCGAGACATCTTGGGGATACGCTAGAGCCCTCGCCTCCGAGTTGTTCAGG ATGAAGAACAATGATGCTGGGCAACACTCGTCGATAGCAACTTCAGCAGC ATTGCCAATGGACATGTCTGACATCGCTGTACCACGTGTCACAGCGACGG AACACTTGGTTAACGTTAACGGCGATGTGGCTGGCGTCGATGGTGGGAAG GATAGGAAGAATAGGGCATCCGCACGGCCGGAAGACGGAGAGAGAGAGAG ATTGGAACGAAAAACTGCTAATAACAATACGGAAGAACCTTTAGACGCTA GATACTGCATCTGCAGGGGGGGGGAGGGGGAACACGGCGGCGTGATGGTG TGTTGCGACGGCTGTTCTGAGTGGTTCCACGACTCGTGGTAAGTCACAGC CCAAGCAGCACTTTGCTACTATTATAACTCTTATTACTATAGACTAGATA GCTATTATAGTACAACACAGTACAGTAGTGGAGAGCGAAATGAGATCCAG GGGTTTCTTTTGTACTATAATACAGATGCGGTATTCTGGAGAGATTGGAT ATCTTGTTGAAGGCGCCAAGCATGTAACTCGTCGTAGACTATTAATAGCC AGATATGGTGATATGGTGATATGGTGATATGGTATATGGTGATATGGTGA TATGGTAATCATAACCTGGAGTGGGCTAATCATAACCTGGCGTGGGCTAA TCATAACCTGGAGTGGGCTAATCATAACCTGGAGTGGGCTAATCATAACC TGGAGTGGGCTAATCATAACCTGGCGTGGGCTTCTTTCGATGATCTCAGT GGTTGCAGATGAGTCGGAGCTCTGCTGCAAGAGAACGACTTGGAAGCGGG CAGCACGGCACCTTGTCGCATCGCAAGTAGAGTACAGTAGCCGCATTTCC TGTCCTACCAACTTTGACCTATTATAATATCCCGAATTCAAAACAGTTCT GCACCTTGTACCTTGTAGAGTTTCCACCACTGTGCCACCTTTCCCATCTC CGCCATCCCCGCCTCTGTTATTGTTGACTGTGTTGACTGTGCCCACAGCG TGGGATTGTCGCCTTCAGCAGTGGACGATCTTGATGACTACTATTGCCTC GTCTGCTGCGAGAGTCAGCCGGGGAAGTACGGACAATACGCACACAGGTG GGCTAGAGCTCTCTACACTATACTAGACTATACTGTACTTAAGTGTACTT TACTAGACTATACTAGACTATGCTGTACTTAAGTGTACTTTAGTGTACTT CTGCACTTTAGTCATACGTTGTGCATTGGCTGCCGCTGCCTGCCGCTTTT GCCGCTGCCCACGTGAAGATCCGGATAAGTGTCTCGGCAAGCGATCAAAG TTGCGCGTTTCAGCTCCATGTGTGTGTGTGTGTGTTGTTCAGTAACATCC TCAATATTTAGTGATCGGGCCTCTATCATATACCGGTATATATATACACC CAGCGAAATAACGGTACCACTCCGCTACCTATTTGTATTATATTGTAGTC GGTTGGACAGGGTAGGGTTACAGGGTTAGTACTGTATAGTACTGTATGAG GGAAATCTACTAAGCTCCAACGAGATTAAAAAAAATCCTCACAGAAAACA AACATGCCTACCCAAAAACAAACTCAAGAACAAAAATAAAATATCTTTAA TAGGAAAGTTGTAAATTGCACAGCAAAGCGCAGGGGGGGAAATAAGCATA TGCTTCGCTCAGACGCCCACGTGCACAAGTATACAGTCGTATAGACCACA GTACACAGTAGAATAGCATATAGCATATAGCATACAGTATACATTAATAG TAGAAACAAACAAACAACCTTTGGATACAAAGGGACAAAGACATTTTTTT TTTGAAGAAAAAACAGAACGTACCTAGACCTTCTGAGCATCCCCCAGTCA GGGGGGAAAATGTCAAAACGTTCAGGTCGGATCAAAGGCGGCAAATACAA AACATCTTTATGGCATTTAAACGGGTTCCCCTATGATGGTAACGTTTGGG TCAACAGTATAATATCGGGGAGAAGCCCACCGTTATACTGTACACTTACA TTAATCGCCATGCAGGGACACCAGAAAAACATCGAATACAAAACAGTACA TCATCAAACAGTAAAGACGAATCCAATACTGTATACAACATTGAAACAAG AACAGAGGACCGTGGTGATGCGGAATCTTCATATTATCCAGAACGTACAC GACACCGTTATTCTTCGAAATAGACGAAGAGCAGTGGGAGATCACACAAG GAAGTAAGAGACAAGCGGAAAGAACTGGGTTCCTCGTTCAATACTTGTCA GGGCTACGACACACAGATGCTCCTCATACAGGACTTAGCTATGGTCCCGC GTTGACCAGACACAGAGGAGGAAGAAGCATCTGCCTGTATTTATTAGACA TTACCAGGTGACATGTTCCATTGTTATGTTGTTTCATTGTTTATTGTTTC ACATGAAAGCAAAGCAAAGCAAAGCAAAGCACGAGGGTTTTTTGTTTCGA GGTGCAAGGGACAAGCGTTACATAGGAATAGGAATTTCATGTCTAGATCG GAATGCTCACACTACGAAGATAGATGAAGACACAAGTGACTCGAAGCGCT CACCTTGAACCAACGAACCGACACCGCTATTAATAAGCAGTTACTTCCTT CAATCCTCCATGGTCGAGAAATTCAACAGTAGCCCAATCATCAAACCATC CATGCTCTCGGTCTCCCATCAACCATCACTTTCTACCATTCAACCATTCC ACCATTAGTAGTCTTTGCAACAGTCGCCATCAAACATTAAACATTAAACC AACAACCCCGAACCTGCACCCCACTCCCTAATCTAATGTGTTAGCTGGAC TACCAACGTCGCTATCGAGGCTGCAGTGCGCCGATTGACCCTCAAGAAGA CGCCCAAGGCCCTCGCGATCGGCAAAACTCAGACAAAAAACAGGACGCCA ATGTTTTCTACCAAGGCTGAAGGTTCCTCCTGCGCAACTGCCTCATGTAG CAACCATGCTACCGAAGTAGATGAAGGAGGAGGGAGCTCTGTCGAAGGAA CAGACGACGCTGCTGTGTGTTCTAAGACCAGGCTTCGAGACATGTCTTCA TGCGCCAAAGACTTTCCTGGCGCGAAGCGGGCGCGGGCGGCGGCGTGGAT TTCGGATTTTGTCGAGCGACATCACGCTGAGCTACGCATGCCTTGGCCAA TCAAGCCGCCGCCCAAGGCTTCGGCTGAGATACAGGAAACACATGAAACA TTTTTTTATCAACCGCTGTCCGACGGTGGATGTGTTTCAAATGAGGGCCA CGACGATGGTCCTCATGACGAGGAGGACAAGGAGAAAACGGGAGACTGGA AAGGAAATAAAATGTCGAGGGGGTCGGGGCAGGGAGCTATTCTGCCAGCA TTTTCTGCCCTACCCAGTTCAACAAAGGAATTCCTCGATCTGGGGTTAGT CACGGAGAATGCGGACGATGAACGCCTCCCCCCAAGCCGTGTGTGCCCTG TGCGGGTTAATATTTGGAGTGAGGGGGACGCTGGGGTGAGGGACAAACAT GGCAGCGGTGGCGATAGCTTGAGCCCGTTCGCAATGATGCTTCGTAACGG TGATCATAATCCGTATTCGGACGTGCAGCAAACCGAGCAGCAGCAGGCTG AAGGCGGCACGTCTGGTACGGTATCGTCGAGTTGGATAAAGCTTCCTCAG TGTTCTCCCCTCGGCTTGGCCCCTTACCCCACATTGCATCCGGTCATTGA CATGAACAGCTACCTTGCCTCCTCTAGTCAAGTTCCCATCAACGCGGCGC ACATGGCACACATACCGCGCATGCCTGTTTGGTCCGGCGGAGCGTTTTCT CAAATTGTCGCTAGTAGGTACTGTGTGCAAGGGGTGAACATCCAGCAGGA TCAGCTTCAATCTCCGGTTGGCGTCAGCACGTCTGCGGCAAGCGCAGTGG CTCCGACGGTGATGCCGAGCGACAACGAAGCGTCGAACGCTCCTATGCCT GGGATGGCTTAACCGTTGTCGCTCCCCGCAGCAGGGTACATATAGTTTCA GGCTCCTACCCTTCGGATGGAGAGGTCGGCCCGGCGTGCCCTGACCAACG TAGTCATTGCCTTAGGAGCAACTAGGATTTATCCTTTATCCGCTCGACAC TTTCGTCTTGGAGGCGACTAGTACTATTACTTGCTTTATGTAATGGCAGT AATTGCAATGTGTGAGCCTCATCCAAGAGCTGTGCTAGGTATAGTAGTAA AGAACATTCTACAAGTCGATGAGTCATGGGCTACTAAAAGAAAGCAAAAA TATGACACGGAACGCTTCCCTACTGAGCGCTAGCTGTCATTTTAGTAGGT AAGGTAAGCGAAGGCAGTGAAGCAGGTGGGTTCGCAGCACCACTTGTCCA ACTCTGCAAGTTGGCATTGGAATCACAAAAGACTCCATGGTTACGGTACT TGTGATAACATCCCTAACGTACCTGCAGTCTGTCTGAGTAAGCTCTTGGT GACTTGGTGATGTTTGATTCTGGCAGAGTGGTGTGTACCCTATCAGATAG TGCCATATAGTGCCAGATAGTGTCAGAGGTAAGGGACATTAGGAGTCAAG ATAAGGATAACAATATAGCTGACACAGAGTCGCGGTAGTGTAGGGTAGGA AGTGGTCAGGCAGTATCATGTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig116:640366..647187-

>mRNA_F-serratus_M_contig116.1323.1 ID=mRNA_F-serratus_M_contig116.1323.1|Name=mRNA_F-serratus_M_contig116.1323.1|organism=Fucus serratus male|type=CDS|length=3942bp|location=Sequence derived from alignment at F-serratus_M_contig116:640366..647187- (Fucus serratus male)
ATGGAAGGCCGATGGAAGGCCGAACTCTTGGGTTCGCTCGCGGCAAGGGC
AAGGATAGGAGTAAATCTCGGCGAGGTCCGGAGTACCACCATAGGACGGA
ATCGCTCGACCCTCCTCTGTCGTTGATCGGATCGCCTGCTTCGGACGCAA
AGGACGTGGGAGCGACTCGCAGCTTGGAGGTCTTGGAGGCGGGTACGCGT
GGGTACGCATGTTTGTTCGAGGCTATCGGCGGAGCGATCCAGAACTCTTG
GGTTCGCTCGCGGCAAGGGCAAGGATAGGAGTAAATCTCGGCGAGGTCCG
GAGTACCACCATAGGACGGAATCGCTCGACCCTCCTCTGTCGTTGATCGG
ATCGCCTGCTTCGGACGCAAAGGACGTGGGAGCGACTCGCAGCTTGGAGG
TCTTGGAGGCGGGTACGCGTGGGTACGCATGTTTGTTCGAGGCTATCGGC
GGAGCGATCCAGGCTGTCGTCAACGCTGAAGCGAAGCCTTTCCGGGAAGC
GAGAACCGAGCTACCGACGCTGAAGGCGGCGTCACGATGGGTCGCCATCG
AGACATCTTGGGGATACGCTAGAGCCCTCGCCTCCGAGTTGTTCAGGATG
AAGAACAATGATGCTGGGCAACACTCGTCGATAGCAACTTCAGCAGCATT
GCCAATGGACATGTCTGACATCGCTGTACCACGTGTCACAGCGACGGAAC
ACTTGGTTAACGTTAACGGCGATGTGGCTGGCGTCGATGGTGGGAAGGAT
AGGAAGAATAGGGCATCCGCACGGCCGGAAGACGGAGAGAGAGAGAGATT
GGAACGAAAAACTGCTAATAACAATACGGAAGAACCTTTAGACGCTAGAT
ACTGCATCTGCAGGGGGGGGGAGGGGGAACACGGCGGCGTGATGGTGTGT
TGCGACGGCTGTTCTGAGTGGTTCCACGACTCGTGGCTGTCGTCAACGCT
GAAGCGAAGCCTTTCCGGGAAGCGAGAACCGAGCTACCGACGCTGAAGGC
GGCGTCACGATGGGTCGCCATCGAGACATCTTGGGGATACGCTAGAGCCC
TCGCCTCCGAGTTGTTCAGGATGAAGAACAATGATGCTGGGCAACACTCG
TCGATAGCAACTTCAGCAGCATTGCCAATGGACATGTCTGACATCGCTGT
ACCACGTGTCACAGCGACGGAACACTTGGTTAACGTTAACGGCGATGTGG
CTGGCGTCGATGGTGGGAAGGATAGGAAGAATAGGGCATCCGCACGGCCG
GAAGACGGAGAGAGAGAGAGATTGGAACGAAAAACTGCTAATAACAATAC
GGAAGAACCTTTAGACGCTAGATACTGCATCTGCAGGGGGGGGGAGGGGG
AACACGGCGGCGTGATGGTGTGTTGCGACGGCTGTTCTGAGTGGTTCCAC
GACTCGTGCGTGGGATTGTCGCCTTCAGCAGTGGACGATCTTGATGACTA
CTATTGCCTCGTCTGCTGCGAGAGTCAGCCGGGGAAGTACGGACAATACG
CACACAGCGTGGGATTGTCGCCTTCAGCAGTGGACGATCTTGATGACTAC
TATTGCCTCGTCTGCTGCGAGAGTCAGCCGGGGAAGTACGGACAATACGC
ACACAGCTGGACTACCAACGTCGCTATCGAGGCTGCAGTGCGCCGATTGA
CCCTCAAGAAGACGCCCAAGGCCCTCGCGATCGGCAAAACTCAGACAAAA
AACAGGACGCCAATGTTTTCTACCAAGGCTGAAGGTTCCTCCTGCGCAAC
TGCCTCATGTAGCAACCATGCTACCGAAGTAGATGAAGGAGGAGGGAGCT
CTGTCGAAGGAACAGACGACGCTGCTGTGTGTTCTAAGACCAGGCTTCGA
GACATGTCTTCATGCGCCAAAGACTTTCCTGGCGCGAAGCGGGCGCGGGC
GGCGGCGTGGATTTCGGATTTTGTCGAGCGACATCACGCTGAGCTACGCA
TGCCTTGGCCAATCAAGCCGCCGCCCAAGGCTTCGGCTGAGATACAGGAA
ACACATGAAACATTTTTTTATCAACCGCTGTCCGACGGTGGATGTGTTTC
AAATGAGGGCCACGACGATGGTCCTCATGACGAGGAGGACAAGGAGAAAA
CGGGAGACTGGAAAGGAAATAAAATGTCGAGGGGGTCGGGGCAGGGAGCT
ATTCTGCCAGCATTTTCTGCCCTACCCAGTTCAACAAAGGAATTCCTCGA
TCTGGGGTTAGTCACGGAGAATGCGGACGATGAACGCCTCCCCCCAAGCC
GTGTGTGCCCTGTGCGGGTTAATATTTGGAGTGAGGGGGACGCTGGGGTG
AGGGACAAACATGGCAGCGGTGGCGATAGCTTGAGCCCGTTCGCAATGAT
GCTTCGTAACGGTGATCATAATCCGTATTCGGACGTGCAGCAAACCGAGC
AGCAGCAGGCTGAAGGCGGCACGTCTGGTACGGTATCGTCGAGTTGGATA
AAGCTTCCTCAGTGTTCTCCCCTCGGCTTGGCCCCTTACCCCACATTGCA
TCCGGTCATTGACATGAACAGCTACCTTGCCTCCTCTAGTCAAGTTCCCA
TCAACGCGGCGCACATGGCACACATACCGCGCATGCCTGTTTGGTCCGGC
GGAGCGTTTTCTCAAATTGTCGCTAGTAGGTACTGTGTGCAAGGGGTGAA
CATCCAGCAGGATCAGCTTCAATCTCCGGTTGGCGTCAGCACGTCTGCGG
CAAGCGCAGTGGCTCCGACGGTGATGCCGAGCGACAACGAAGCGTCGAAC
GCTCCTATGCCTGGGATGGCTTAACTGGACTACCAACGTCGCTATCGAGG
CTGCAGTGCGCCGATTGACCCTCAAGAAGACGCCCAAGGCCCTCGCGATC
GGCAAAACTCAGACAAAAAACAGGACGCCAATGTTTTCTACCAAGGCTGA
AGGTTCCTCCTGCGCAACTGCCTCATGTAGCAACCATGCTACCGAAGTAG
ATGAAGGAGGAGGGAGCTCTGTCGAAGGAACAGACGACGCTGCTGTGTGT
TCTAAGACCAGGCTTCGAGACATGTCTTCATGCGCCAAAGACTTTCCTGG
CGCGAAGCGGGCGCGGGCGGCGGCGTGGATTTCGGATTTTGTCGAGCGAC
ATCACGCTGAGCTACGCATGCCTTGGCCAATCAAGCCGCCGCCCAAGGCT
TCGGCTGAGATACAGGAAACACATGAAACATTTTTTTATCAACCGCTGTC
CGACGGTGGATGTGTTTCAAATGAGGGCCACGACGATGGTCCTCATGACG
AGGAGGACAAGGAGAAAACGGGAGACTGGAAAGGAAATAAAATGTCGAGG
GGGTCGGGGCAGGGAGCTATTCTGCCAGCATTTTCTGCCCTACCCAGTTC
AACAAAGGAATTCCTCGATCTGGGGTTAGTCACGGAGAATGCGGACGATG
AACGCCTCCCCCCAAGCCGTGTGTGCCCTGTGCGGGTTAATATTTGGAGT
GAGGGGGACGCTGGGGTGAGGGACAAACATGGCAGCGGTGGCGATAGCTT
GAGCCCGTTCGCAATGATGCTTCGTAACGGTGATCATAATCCGTATTCGG
ACGTGCAGCAAACCGAGCAGCAGCAGGCTGAAGGCGGCACGTCTGGTACG
GTATCGTCGAGTTGGATAAAGCTTCCTCAGTGTTCTCCCCTCGGCTTGGC
CCCTTACCCCACATTGCATCCGGTCATTGACATGAACAGCTACCTTGCCT
CCTCTAGTCAAGTTCCCATCAACGCGGCGCACATGGCACACATACCGCGC
ATGCCTGTTTGGTCCGGCGGAGCGTTTTCTCAAATTGTCGCTAGTAGGTA
CTGTGTGCAAGGGGTGAACATCCAGCAGGATCAGCTTCAATCTCCGGTTG
GCGTCAGCACGTCTGCGGCAAGCGCAGTGGCTCCGACGGTGATGCCGAGC
GACAACGAAGCGTCGAACGCTCCTATGCCTGGGATGGCTTAA
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