prot_F-serratus_M_contig1156.1288.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1156.1288.1
Unique Name	prot_F-serratus_M_contig1156.1288.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	117

Homology

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 2.980e-69
Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAG KK++NKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.230e-62
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAG K K  KRTESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.630e-62
Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAG-GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA  GKKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.120e-60
Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAG-GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA  GKKK  KRTESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 190 bits (482), Expect = 1.380e-60
Identity = 99/116 (85.34%), Postives = 110/116 (94.83%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+AKAPKKAG K+  NKR E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.620e-60
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAG--GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK G  GK +  KR ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

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BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 189 bits (480), Expect = 2.960e-60
Identity = 100/116 (86.21%), Postives = 108/116 (93.10%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+SAKAPKKA    KS KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 188 bits (478), Expect = 7.020e-60
Identity = 101/116 (87.07%), Postives = 111/116 (95.69%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+A APKKAGGK+ S KRTESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    8 MAKTPSKKAA-APKKAGGKR-SRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A7R9ZTA9_9STRA (Histone H2B n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZTA9_9STRA)

HSP 1 Score: 185 bits (470), Expect = 7.230e-58
Identity = 99/115 (86.09%), Postives = 107/115 (93.04%), Query Frame = 0

Query:    3 KTPSKKSAKAPKKAG-GKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            KTPSK+SAKAPKKA  G  KS KRTE+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:   64 KTPSKQSAKAPKKASTGSSKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 178

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Match: A0A7S2P1D6_9STRA (Histone H2B n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P1D6_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.180e-56
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0

Query:    1 MAKTPSKKS-AKAPKKA--GGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+ +KA KK   G KK+S KR ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   35 MAKTPSKKAPSKAAKKPTDGAKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 153

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1156.1288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	2.980e-69	97.41	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	1.230e-62	87.93	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	1.630e-62	89.74	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A836CJT3_9STRA	1.120e-60	89.74	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
H2B_OLILU	1.380e-60	85.34	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
A0A485K2U0_9STRA	1.620e-60	85.59	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
B7FWR8_PHATC	2.960e-60	86.21	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A6U6DWX5_9STRA	7.020e-60	87.07	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
A0A7R9ZTA9_9STRA	7.230e-58	86.09	Histone H2B n=1 Tax=Craspedostauros australis TaxI...	[more]
A0A7S2P1D6_9STRA	2.180e-56	82.35	Histone H2B n=2 Tax=Skeletonema marinoi TaxID=2675...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 29..47 score: 84.56 coord: 100..113 score: 92.65 coord: 87..100 score: 90.61 coord: 70..87 score: 56.83 coord: 48..68 score: 67.66
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 19..115 e-value: 1.3E-69 score: 247.3
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 3..116
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 84..106
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 3..92 e-value: 8.4E-18 score: 65.0
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..116 e-value: 4.7E-57 score: 193.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..116
None	No IPR available	PANTHER	PTHR23428:SF196	HISTONE H2B TYPE 1-N	coord: 3..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1156	contig	F-serratus_M_contig1156:91730..92080 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1156.1288.1	mRNA_F-serratus_M_contig1156.1288.1	Fucus serratus male	mRNA	F-serratus_M_contig1156 91730..92080 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1156.1288.1 ID=prot_F-serratus_M_contig1156.1288.1|Name=mRNA_F-serratus_M_contig1156.1288.1|organism=Fucus serratus male|type=polypeptide|length=117bp
MAKTPSKKSAKAPKKAGGKKKSNKRTESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold