prot_F-serratus_M_contig1156.1284.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1156.1284.1
Unique Name	prot_F-serratus_M_contig1156.1284.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	124

Homology

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 2.910e-70
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTK 121
            M+GKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.720e-69
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTK 121
            M+GKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.050e-68
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTKG 122
            M+GKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK + G
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 122

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 5.410e-68
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTKG 122
            M+GKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK + G
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 173

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.030e-67
Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            M+GKGKGGRGKK TSRS+KAGLQFPVGRIGRF+K GKYS RVG G+PVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.930e-65
Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = 0

Query:    1 MTGKGKGGRG---KKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            M GKGKGGRG   KK+TS+SSKAGLQFPV R+GRFLKVG+Y++RVGAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 121

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: C1EAM9_MICCC (Histone H2A n=7 Tax=cellular organisms TaxID=131567 RepID=C1EAM9_MICCC)

HSP 1 Score: 196 bits (499), Expect = 6.050e-63
Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTK 121
            M+G+GKG  GKKA SRS+KAGLQFPVGRI R+LKVGKY+ RVGAG+PVYLAAVLEYL AEVLELAGNA+RDNKK RIVPRHIQLA+RNDEEL+KLLG VTIASGGVLPNIH+VLLPKK  K
Sbjct:    1 MSGRGKGKSGKKAVSRSAKAGLQFPVGRIARYLKVGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNASRDNKKTRIVPRHIQLAIRNDEELSKLLGTVTIASGGVLPNIHSVLLPKKSKK 121

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 196 bits (498), Expect = 1.080e-62
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0

Query:    1 MTGKGKGGR-GKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTKG 122
            M G+GKG   GKKA SRS+KAGLQFPVGRI R+LK GKY++R+GAG+PVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK TKG
Sbjct:    1 MAGRGKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKK-TKG 122

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: A4S885_OSTLU (Histone H2A n=13 Tax=Mamiellales TaxID=13792 RepID=A4S885_OSTLU)

HSP 1 Score: 195 bits (496), Expect = 2.170e-62
Identity = 98/121 (80.99%), Postives = 112/121 (92.56%), Query Frame = 0

Query:    1 MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVTK 121
            M+G+GKG  GKKATSRS+KAGLQFPVGR+ R+LK GKY+ RVGAG+PVYLAAV+EYL AEVLELAGNAARDNKK+R+VPRHIQLA+RNDEEL+KLLG VTIA+GGVLPNIH+VLLPKK  K
Sbjct:    1 MSGRGKGKSGKKATSRSAKAGLQFPVGRVARYLKAGKYATRVGAGAPVYLAAVMEYLCAEVLELAGNAARDNKKSRVVPRHIQLAIRNDEELSKLLGTVTIAAGGVLPNIHSVLLPKKSKK 121

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BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 195 bits (496), Expect = 3.110e-62
Identity = 99/117 (84.62%), Postives = 113/117 (96.58%), Query Frame = 0

Query:    3 GKGKGGRG-KKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            GKGKGGRG KKA S+S+KAGLQFPVGR+GRFLK G+Y++RVGAG+PVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKK 121

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1156.1284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI9_ECTSI	2.910e-70	90.08	Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
D7G193_ECTSI	1.720e-69	90.08	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5KG79_9PHAE	1.050e-68	89.34	Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FVQ5_ECTSI	5.410e-68	89.34	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D8LLP0_ECTSI	1.030e-67	89.83	Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8...	[more]
A0A836CG77_9STRA	3.930e-65	86.78	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
C1EAM9_MICCC	6.050e-63	83.47	Histone H2A n=7 Tax=cellular organisms TaxID=13156...	[more]
H2A_CHLRE	1.080e-62	85.37	Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ...	[more]
A4S885_OSTLU	2.170e-62	80.99	Histone H2A n=13 Tax=Mamiellales TaxID=13792 RepID...	[more]
A0A835ZLE9_9STRA	3.110e-62	84.62	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 12..34 score: 72.8 coord: 41..56 score: 84.58 coord: 70..84 score: 74.98 coord: 56..69 score: 90.54 coord: 98..116 score: 76.04
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 3..121 e-value: 1.7E-77 score: 273.5
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..122 e-value: 1.9E-60 score: 204.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..121
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 90..122 e-value: 5.8E-19 score: 67.5
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 11..87 e-value: 1.0E-14 score: 55.0
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 3..121
None	No IPR available	PANTHER	PTHR23430:SF207		coord: 3..121
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 20..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1156	contig	F-serratus_M_contig1156:76579..76950 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1156.1284.1	mRNA_F-serratus_M_contig1156.1284.1	Fucus serratus male	mRNA	F-serratus_M_contig1156 76579..76950 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1156.1284.1 ID=prot_F-serratus_M_contig1156.1284.1|Name=mRNA_F-serratus_M_contig1156.1284.1|organism=Fucus serratus male|type=polypeptide|length=124bp
MTGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSQRVGAGSPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKVTKGT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR009072	Histone-fold
IPR032454	Histone_H2A_C
IPR007125	Histone_H2A/H2B/H3
IPR032458	Histone_H2A_CS