mRNA_F-serratus_M_contig1001.127.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE) HSP 1 Score: 350 bits (899), Expect = 4.590e-109 Identity = 169/310 (54.52%), Postives = 226/310 (72.90%), Query Frame = 2 Query: 545 SVCACGVDVCFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQGHSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVD-YLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLSAAKTFEDWVLSFTH-MVAPEFCATFVANGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLLHN*GSGY 1468 SVC G VC DPH+QGLRGQ I+W+GVDGGWY L+KDD D+ INVR T+PLP++FPDRQ +T +A+LS+GHS V+EV++PYTV T+GC + VSPCLA+GGL + VD +QVD L +V G + VSSSNLP C++FGG ++WARM +DM+ GRR+L ++ E+W+L + H M AP +CA ++A DL+ +QSD A+ +I TPT VRL+ G+N++ G+ + GR LP+L+FWQMGVG++GL++++ +LSGLLG TAR V D G VMEG DA G I DYRVSDA FPLL G+ Sbjct: 103 SVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDEKEEGH 412
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI) HSP 1 Score: 320 bits (821), Expect = 5.360e-99 Identity = 153/303 (50.50%), Postives = 216/303 (71.29%), Query Frame = 2 Query: 566 DVCFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQGHSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVD-YLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLSAAKTFEDWVLSFT-HMVAPEFCATFVANGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLLHN*GSGY 1468 D+ DPH++GLRGQ I W+GVDGGWY LVKDD DL INVR T+PLP++FPDRQ +T +AI+S+G+S V+EV++PYT+ T GC + VSPCLA+GGL + VDG++VD L + G + +S+SNLP CR+FGG ++WARM +D+L RRQL ++ E+W+L + +M A +CA ++A DL+ +Q++ A+ +I TPT VRL+ G+N++ G+ + GR LP+L+FWQM VG++GL++++ +LSGLLG TAR V G VMEG+DA G + DYRVS A G F LL G+ Sbjct: 11 DMWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDEKEEGH 313
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE) HSP 1 Score: 313 bits (801), Expect = 2.690e-91 Identity = 159/303 (52.48%), Postives = 210/303 (69.31%), Query Frame = 2 Query: 548 VCACGVDVCFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQGHSFVVEVKDPYTVDTH-GCSD-DVSPCLADGGLTVSVDGEQVDYLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLSAAKTFEDWVLSFTHMVAPEFCATFVANGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLLH 1450 +C G +C DPH++GL GQ I+W GVDG WY VKD + DL +NVR T+PLP+DFPDRQ +TG++++S+GHS V+EV +PY+ D + GC D +PCLA+GGL+V+VDGE+ L P LPG IEVS+ NLP C +FGG K+WAR + +L RR+L A ++FEDWVLSFT M A ++C +++ L+ VQS A+ +I TP VVRL+VGI H+ + D GR LP+LD WQM VG+ GL+L +E+L+G+LG TAR V D G+ VM G DA G DYRVS G DF LLH Sbjct: 394 ICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAIL-ARRKLRA-QSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLH 694
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE) HSP 1 Score: 290 bits (743), Expect = 8.460e-88 Identity = 142/298 (47.65%), Postives = 200/298 (67.11%), Query Frame = 2 Query: 578 DPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQGHSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVDYLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLSAAKTFEDWVLSFT-HMVAPEFCATFVANGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLLHN*GSGY 1468 DPH++GL GQ + W+G DGGWY L+KDD DL INVR T+PLP++FPDRQ +T +AI+S+G+S V+EVK+PYT DT GC +DVSPC A+GGL + VDG +VD L S +P GG+++WARM +D+L GRRQL ++ E+W+L + +M A +CA ++A DL+ +Q++ A+ +I TPT VRL+ G+N++ G+ + GR LP+L+FWQ+ VG++GL+++ +LSGL G TA V D G VMEG DA G + DYRVS A G F LL +G+ Sbjct: 20 DPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDELLR-------------FSRQMP------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDETENGH 298
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE) HSP 1 Score: 281 bits (720), Expect = 1.030e-83 Identity = 147/290 (50.69%), Postives = 199/290 (68.62%), Query Frame = 2 Query: 596 LRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQGHSFVVEVKDPYTVDTHG-CSDDV-SPCLADGGLTVSVDGEQVDYLTVPTNVVH---LPGDIEVSSSNLPPACREFGGRKVWARMQKD-MLRGRRQLSAAKTFEDWVLSFTHMVAPEFCATFVANGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLL 1447 L GQ I+W G+DGGWY LV+D + DL +NVR T+P P +FPDRQ +TG+++++ GHS V+EV PY DT G C D +PCLA+GGL+V VDGE+ + + + LPG I+VS++NLP C +FGG K+ AR + ++ GRR L ++TFE+WVLSF HM A ++C ++A+ DLS VQS QA+ +I TP VVR +VGI H+ G + GR +P+LD W+M VG+ GL+L +E+L+G+LG TAR VLD G VM+G A G DYRVS A GTDF LL Sbjct: 61 LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHL-LSETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALL 349
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.520e-66 Identity = 131/299 (43.81%), Postives = 178/299 (59.53%), Query Frame = 2 Query: 578 DPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILS-QGHSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVDYLTVPTNVVHLPG-DIEVSSSNLPPACREFGGRKVWARMQKDM--LRGRRQLSAAKTFEDWVLSFTHMVAPEFCATFVAN---GDLSKVQSDQALLRIATPTAVVRLSVGINHRRAG-KTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLLH 1450 D H+ GL GQ I+W G D GWY L+ + E ++N R T+P+P++FP RQ ++GV+I S +G S VVEVK+P T +T GCS +PCLA+G L + VDG++ L P + LPG D+ VSS+NLP CR FGG ++WA M GRR L F DWVL M AP +CA F LS VQS++A+LR+ T VR+ VG+N++ + +D +PELDFWQ + E L + E L G+LG+TAR V+D G + G +AL G + RVS G DF +H Sbjct: 10 DSHMVGLLGQEIDWYGEDSGWYCLLVNSE--FQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGE-LGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQMH 305
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI) HSP 1 Score: 177 bits (448), Expect = 1.350e-43 Identity = 102/255 (40.00%), Postives = 152/255 (59.61%), Query Frame = 2 Query: 557 CGVDVCFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQG-HSFVVEVKDPYTV--DTHGCSDDV--SPCLADGGLTVSVDG-EQVDYLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARM--QKDMLRGRRQLSAAKTFEDWVLSFTHMVAPEFCATFVA--NGD---LSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVE 1282 C + DPHL GLRGQH +W G DGGWY + D L++N+R TS LP FP+RQ +TGVA++++G H+ ++ DP + HG D V +PCL +GGL ++VDG EQ+ GDI +++ NLP C+ FG +W + ++ + G R L +A+T DW+++ + M+AP +C ++ NGD L+ ++S A+LRI TP +R++VGIN R +T + GR +P FWQM V VE Sbjct: 238 CTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLST-PDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSAPCLVNGGLRITVDGREQLQG----AGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTERE-QTLQDGRVVPTASFWQMDVRVE 486
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE) HSP 1 Score: 166 bits (420), Expect = 9.720e-41 Identity = 106/297 (35.69%), Postives = 156/297 (52.53%), Query Frame = 2 Query: 572 CFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQG-----HSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVDYLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLS---AAKTFEDWVLSFTHMVAPEFCATFV------ANGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGK--TDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPGKITDYRV 1414 C DPH+ G GQ ++ G DG WY +V D DLE+N+R TSP+P + P+ +ITG+ I ++ HS V+ V DP+++D+ C S CLADG LTV +DG D + L + +S+ NLP ACR FG K W R + + + R+L+ + DW+L C +V L + S+ +I TP +RLS G H+ A + TDRF D+P+ WQM + + ++L ++ +G+LG T + LDA GN +MEG A+ G DY V Sbjct: 138 CGDPHMTGFLGQKFDFVGQDGEWYAVVSD-MPDLEVNMRVTSPVPAE-PEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDS-ACPVQGSTCLADGALTVELDG---DVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRF--DIPDHLTWQMNLAFDNVDLAVDA-TGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLV 425
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.190e-38 Identity = 103/288 (35.76%), Postives = 159/288 (55.21%), Query Frame = 2 Query: 572 CFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQG-----HSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVDYLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLR--GRRQLSAAKTFEDWVLSFTHMVAPEFCATFVA-------NGDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPG 1393 C DPH+ G GQ ++TG DG WY L+ D + +N+R T+P+P+ PD +ITG+++++Q HS V+ VKDP+++++ C V+PCLA+G L+VS+DG++ L+ P VV + +++VS NLP ACR FG K W R + + + GRR S + DW+L C +VA +G L +S+ A +I P A VRLS G H+ A ++G LP+ WQM + ++ ++ G+LG T DA G VM G +++ G Sbjct: 55 CGDPHMTGFHGQKFDFTGDDGEWYCLISD-LPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLES-SCPAGVTPCLANGALSVSLDGKEA--LSAP-GVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIA----QYG--LPDHSTWQMNLAIDSDSVG-VGAQGVLGETLVPTRDADGEYVMHGMESIRG 329
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.030e-36 Identity = 61/108 (56.48%), Postives = 87/108 (80.56%), Query Frame = 2 Query: 560 GVDVCFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQGHSFVVEVKDPYTVDTHG-CSDDVS-PCLADGGLTVSVDGEQ 877 G D+C DPH++GLRGQHI+W GVDGGWY +KDD+ DL +NVR T+PLP +FP+RQ +TG+++++ HS ++EV +PY D +G C D +S PCLA+GGL+V+V+GE+ Sbjct: 4 GTDICDDPHMKGLRGQHIDWFGVDGGWYAFIKDDDIDLHVNVRLTAPLPEEFPERQLVTGLSVIAGEHSLILEVTNPYDTDINGGCLDGMSTPCLANGGLSVTVNGEK 111 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.127.1 >prot_F-serratus_M_contig1001.127.1 ID=prot_F-serratus_M_contig1001.127.1|Name=mRNA_F-serratus_M_contig1001.127.1|organism=Fucus serratus male|type=polypeptide|length=439bp MFGTTSLCYLLLGGIAALGQAHAASKHTDVQLEILGSGTGEMIAAVSQDKback to top mRNA from alignment at F-serratus_M_contig1001:259720..268877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1001.127.1 ID=mRNA_F-serratus_M_contig1001.127.1|Name=mRNA_F-serratus_M_contig1001.127.1|organism=Fucus serratus male|type=mRNA|length=9158bp|location=Sequence derived from alignment at F-serratus_M_contig1001:259720..268877- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1001:259720..268877- >mRNA_F-serratus_M_contig1001.127.1 ID=mRNA_F-serratus_M_contig1001.127.1|Name=mRNA_F-serratus_M_contig1001.127.1|organism=Fucus serratus male|type=CDS|length=2634bp|location=Sequence derived from alignment at F-serratus_M_contig1001:259720..268877- (Fucus serratus male)back to top |