mRNA_F-serratus_M_contig115.1259.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 527 bits (1358), Expect = 6.730e-181 Identity = 300/481 (62.37%), Postives = 363/481 (75.47%), Query Frame = 1
Query: 4 AMAAAPECEPLDLTAYNLTDYIRWSTTSDRMYLEKEACVTLTDIWESR-------PAGPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENTIEGNIMTGSLARFTDAFDSLWLDNDIPDDYEFKMQEGACFDPDSDL 1398
A A C P+DL +N+TDYIRWST SDR+YLE AC T+TDI+ESR GPVYPFD+ TG + + TGSWY+GSSLY+TEG+ LV+QG GGDCDHLLLAS +K IN+RA+GG I ++GTHVESW++ E VD++YDDGRSY+SAISEVI NP+ +C GMA ND GEAR+DI+DSEINHLG Y++ESYGI YKVRG+CND SNPE+F+ V VTGDIL SHIH+LYFGHYS+GHQGG++SYN VHDN GYGFDPHDDSDY+TI N XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX SSNCE+S N NK GIRMSMGS+ N A+ N IV+NG+DERY I+LYRG D P VE SDGRPR N V+DN+L+SD + ++D+N IEGN + G +RF D+F++LW N +PD +EFK+++G+CFDP+SD+
Sbjct: 34 ATTVATNCPPMDLVNHNITDYIRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDGSCFDPESDM 514
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 9.480e-170 Identity = 301/513 (58.67%), Postives = 381/513 (74.27%), Query Frame = 1
Query: 22 ECEPLDLTAYNLTDYIRWSTTSDRMYLEKEACVTLTDIWESR-----PAGPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENTIEGNIMTGSLARFTDAFDSLWLDNDIPDD-YEFKMQEGACFDPDSDLSSTNEVYGEI--FNEDYSYTYDVDF------DDDGFFCS 1491
+C +DL +N+TDYIRWS SDR+YLE ACVTLTDI+ESR GP+YPFD+ T ++ + TGSWY+ S+LYITEGS LV+QG GGDCDHLLLAS P+K IN+RAHGG + ++GTHVESW++ VD++ +DGRSY+SAISEVIT+P+E C G AKND GEAR+DI+DSE+NHLGWYD+ESYGI YKVRG+C D SNPE+FD V VTGDIL S IH+ YFGHYS+GHQGG++S+N +H N GYGFDPHDDSDY+TIHN XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX SS C VSDN Y NK GIRMS+GSS N Y N I++NG D +Y I+LY+G D P+V SDGRPR NH++DN+L+SD + +K+++SD+ EGN++ G ++RF D+F++LW N + D +++K++ +CFDP+SD+ + Y ++ E+ + TY + GFFC+
Sbjct: 50 DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPD-TYEDVAAMEEEEATTYXXXXXXXXXVSESGFFCA 559
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE) HSP 1 Score: 447 bits (1150), Expect = 1.150e-149 Identity = 286/504 (56.75%), Postives = 356/504 (70.63%), Query Frame = 1
Query: 97 YLEKEACVTLTDIWESRP-----AGPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINH--------------------LGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENTIEGNIMTGSLARFTDAFDSLWLDNDIPDD-YEFKMQEGACFDPDSDLSS--TNEVYGEIFNED---YSYTYDVDFDDDGFFC 1488
YLE ACVTLTDI+ESR GP+YPFD+ ++ + TGSWY+ SSLYITEGS LV+QG GGDCDHLLLAS P+K IN+RAHGG + ++GTHVESW++ VD++ +DGRSY+SAISEVIT+P+E C G AKND GEAR+DI+DSE+N LGWYD+ESYGI YKVRG+C D SNPE+FD V VTGDIL S IH+ YFGHYS+GHQGG++S+N +H N GYGFDPHDDSDYLTIHN XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX SS C VSDN Y +K GIRMS+GSS N Y N I++NG D +Y I+LY+G D P+V SDGR R NH++DN+L+SD Q +K+++SD+ EGN++ G ++RF ++F++LW N + D +++K++ +CFDP+SD+ T E + E+ YS D + GFFC
Sbjct: 35 YLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYSXXXXFDVSESGFFC 536
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 317 bits (812), Expect = 3.300e-99 Identity = 182/459 (39.65%), Postives = 256/459 (55.77%), Query Frame = 1
Query: 67 IRWSTTSDRMYLE------KEACVTLTDIWESRPA-GPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSD-----ENTIEGNIMTGSLARFTDAFDSLWLDNDIPD--DYEFKMQEGACFDPDSD 1395
IR++ T+ R+YLE + C TL IWESR P+Y D ++G ++ + TG+W + LY+ +G TL + GTD GGD D L L S + IN+RAHGG++ GT V SW+ ++ D+D DGRSYISA+SE++T+ E C G AKN GEAR+DI +SEI +LG+ D+ESYG+ +KVRG+C D SNPE+FDDV V G++ S IH+L FG Y++GHQ GD+ N +HDN+GYGFDPHDDSD+LTIH+ S N +VS+NTF NKYG+RMS+G + +N ++ I+ N +Y + Y G+DEP+V S GR + N N+ +T+K+ +D +N E G + RF DA +S+ N D D+E K+ +CFD +SD
Sbjct: 51 IRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCA-DNVFSENIISNN--SKYNAYTYLGSDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 316 bits (810), Expect = 5.850e-99 Identity = 186/460 (40.43%), Postives = 254/460 (55.22%), Query Frame = 1
Query: 67 IRWSTTSDRMYLE-------KEACVTLTDIWESRPA-GPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSD-----ENTIEGNIMTGSLARFTDAFDSLWLDNDIPDDYEF--KMQEGACFDPDSD 1395
IR++ T+ R+YLE + CVTL IWESR GP+Y D ++G ++ SATG+W + LY+ +G TL + G++ GGD D L L S + IN+RAHGG++ T V SW+ ++ D+D DGRSYISAISE+IT+ E C G AKN GEAR+DI SEI +LG++D+ESYG+ +KVRG+C D SNPEVFDDV V G++ S IH++ FG Y++GHQ GD+ N +HDN+GYGFDPHDDSD+LTIH+ S N +VS+NTF NKYG+R S+G + N NN I N + Y + Y G DEP+V S GR + N N+ +T+K+ +D +N E G + RF +A ++L N DD EF K+ ACFD ++D
Sbjct: 46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE---YNAYSYLGTDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 301 bits (771), Expect = 2.980e-93 Identity = 197/469 (42.00%), Postives = 273/469 (58.21%), Query Frame = 1
Query: 19 PECEPLDLTAYNLTDYIRWSTTSDRMYLE------KEACVTLTDIWE-SRPAGPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENT-IEGNIMTGSLARFTDAFDSLWLDNDIPDDYEFKMQEGACFDPDSD 1395
PEC+ ++ IR+S+ +R+YLE + CVTL IWE R P+Y D ++G ++ SATG+W + L++ +G TL + GT GGD D L L S D IN+RAHGG++ T V +W+ + D D +DGRSY+SA+SEVIT+ S+ C G AKN+ GEAR+DI DSE+ +LG++ +ESYG+ +KVRG+C D SN ++F+DV V G+I S IH+ FG Y++GHQ GD+ N +HDN+GYGFDPHDDSD+LTIH+ XXXXXXXXXXXXXXXX S N +VSDN F NKYGIR S+GS N +NN V++G RY+ + Y G+D P+V DS GR + N +N +I +++K++ +D I+ + RF DA +L N + + K+ GA FD SD
Sbjct: 34 PECDE------SIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNN--VISGS-TRYSTYSYLGSDAPDVVDS-GRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSD 492
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 292 bits (748), Expect = 3.790e-90 Identity = 175/453 (38.63%), Postives = 245/453 (54.08%), Query Frame = 1
Query: 67 IRWSTTSDRMYLE------KEACVTLTDIWESRPAG-PVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENTIEGNIMTGSLA-RFTDAFDSLWLDNDIPDDYEFKMQEGACFDPDSD 1395
+R++ S R+Y+E + CVTL IWE + G P+Y D ++G ++ SATG+W + +Y+ +G TL + G GGD D L L S D I++RA+GG++ T V +W+ ++A D D DGRSYISA+SEVIT+ + C G AKN+ GEAR+DI +SE+ +LG++ E+YG+ +KVRG+C D NPE+FDDV V G+I S IH+ FG Y++GHQ GD+ N +HDN+GYGFDPHDDSD+LTIH+ S N +VSDNTF NKYG+R+S+G N +K V+ G E + F Y GAD+PEV DS GR + N +N +I +++ + +D N + A RF DA +L N D K+ GA FD SD
Sbjct: 18 VRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIF--SKNVITGSAE-FNTFSYLGADKPEVVDS-GRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSD 466
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 286 bits (732), Expect = 2.060e-87 Identity = 198/453 (43.71%), Postives = 273/453 (60.26%), Query Frame = 1
Query: 67 IRWSTTSDRMYLE------KEACVTLTDIWESRP-AGPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENT-IEGNIMTGSLARFTDAFDSLWLDNDIPDDYEFKMQEGACFDPDSD 1395
IR+S +S R+YLE + CVTL +IW+ + P+Y +G +++SATG+W + LY+ +G TL + GT GG+ + L L S IN+RAHGG++ T V +W+ ++ V D RSYISA+SE+IT+ E C G AK GEAR+DI DSE+ +LG+ +ESYG+ +KVRG+C DGSNPEVFD+V V G+I S IH+ +FG Y++GH+ GD+ N +H N YGFDPHDDSD+LTIH+ XXXXXXXXXXXXXXXXXXXXXXXXXX XXXX S N +VS+N F NKYG+R+S+G + +N ++ ++ D +Y ++ Y G+D+P V DS GR + N DNT+ +++K+ +D I+ ARF DA +L N K+ +GACFD SD
Sbjct: 47 IRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCA-DNVFSKNVI--SDSSKYNVYTYEGSDDPWVVDS-GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSD 495
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 277 bits (709), Expect = 3.190e-85 Identity = 152/358 (42.46%), Postives = 205/358 (57.26%), Query Frame = 1
Query: 67 IRWSTTSDRMYLE-------KEACVTLTDIWESRPA-GPVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDKIINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGD 1110
IR++ ++ R+YLE + CVTL IWESR GP+Y D ++G ++ SATG+W + LY+ +G TL + G++ GGD D L L S + IN+RAHGG++ T V SW+ ++ D+D DGRSYISAISE+IT+ E C G AKN GEAR+DI SEI +LG++D+ESYG+ +KVRG+C D SNPEVFDDV V G++ S IH++ FG Y++GHQ GD+ N +HDN+GYGFDPHDDSD+LTIH+ S N +VS+NTF NKYG+R S+G + N NN I N +
Sbjct: 46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 283 bits (723), Expect = 4.830e-85 Identity = 172/478 (35.98%), Postives = 247/478 (51.67%), Query Frame = 1
Query: 19 PECEPLDLTAYNLTDYIRWSTTSDRMYLE------KEACVTLTDIWESRPAG-------PVYPFDDETGQLAASATGSWYIGSSLYITEGSTLVIQGTDFGGDCDHLLLASRPDK-------IINMRAHGGNIWIEGTHVESWNIQEDAVDDDYDDGRSYISAISEVITNPSEDCVGMAKNDRGEARLDILDSEINHLGWYDAESYGIVYKVRGYCNDGSNPEVFDDVEVTGDILRSHIHNLYFGHYSFGHQGGDFSYNHVHDNAGYGFDPHDDSDYLTIHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SSNCEVSDNTFYWNKYGIRMSMGSSYNNAYNNKIVVNGDDERYTIFLYRGADEPEVEDSDGRPRYNHVYDNTLISDYQTLKVMSSDENTIEGNIM-TGSLARFTDAFDSLWLDN-DIPDDYEFKMQEGACF 1380
PEC + IR+S T+ R+YLE + CVT+ IWE+R G P+Y D +G+ + TG+W + LY+ +G TL + G GG D L L S P IN+RAHGG++ E T V W+ ++ D D DGRSYISA+SE++ +P++ C G AKN GEAR+DI++SE+ ++G++D+ESYG+ +KVRG+C D SNPEVFD V V G+I S +H++ F Y++GHQ GD+ N VH N+GYG+DPHDDSD+LTIH+ SSN E+S N F NKYGIRMS+G N NN + + +Y I+ Y+G+D EV+ + GR + N NT++ Q +K+ SD I N+ L F++ +++ N + D E ++ E ACF
Sbjct: 113 PECNSTQAVS------IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMT---NTSQYAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig115.1259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig115.1259.1 >prot_F-serratus_M_contig115.1259.1 ID=prot_F-serratus_M_contig115.1259.1|Name=mRNA_F-serratus_M_contig115.1259.1|organism=Fucus serratus male|type=polypeptide|length=496bp MAAAPECEPLDLTAYNLTDYIRWSTTSDRMYLEKEACVTLTDIWESRPAGback to top mRNA from alignment at F-serratus_M_contig115:491001..495071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig115.1259.1 ID=mRNA_F-serratus_M_contig115.1259.1|Name=mRNA_F-serratus_M_contig115.1259.1|organism=Fucus serratus male|type=mRNA|length=4071bp|location=Sequence derived from alignment at F-serratus_M_contig115:491001..495071- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig115:491001..495071- >mRNA_F-serratus_M_contig115.1259.1 ID=mRNA_F-serratus_M_contig115.1259.1|Name=mRNA_F-serratus_M_contig115.1259.1|organism=Fucus serratus male|type=CDS|length=2976bp|location=Sequence derived from alignment at F-serratus_M_contig115:491001..495071- (Fucus serratus male)back to top |