mRNA_F-serratus_M_contig1148.1252.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 702 bits (1812), Expect = 1.490e-239 Identity = 350/506 (69.17%), Postives = 409/506 (80.83%), Query Frame = 3
Query: 132 ATTSTFKRSMLAV-GSLVLAAAANTPSPNDAISKPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTF----VDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1634
+ TS+F ++L + S AAAA+T SPND ISKP+C+S +S+RY+GTT RLYLESAD TRGGC TLG IW +RAGKAPLYAVDP + +SE TGTWLLTE+LYVEDGITL+V+G+ GGD+DELRLLS + T+INLRAHGGSLDF+ TKVFSWD STNSPD + TDGRSYISAVSE++ + ETC+G AK+ MGEARMDI +SE+GYLGF DSESYGLTWKVRGFC +K+NPEIFD+VNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNGYHGIIASKRCN +S+QGNEVYGGAE SAGIFLHRS YVHDNGDAG+A LESF+A VS NTFENNKYGVR SVG ADN F++N I N++KYN YTY GSD PDVV SGR QNNVFS N GA+E IK+KE+D QFLDN F D +RF+D+ VM GN+GLD + ELKV+N +CFDG SDSG+EPVC
Sbjct: 7 SATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 676 bits (1743), Expect = 2.910e-229 Identity = 330/465 (70.97%), Postives = 382/465 (82.15%), Query Frame = 3
Query: 255 ISVRYSGTTARLYLESADN-STRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTF----VDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1634
+S+RY+GTTARLYLESADN +TRGGCVTLG IW +RAGK PLYAVDP + +S TGTWLLTE+LYVEDGITL+V+GS GGD+DELRLLS TFINLRAHGGSLDF+STKVFSWD STNSPD + TDGRSYISA+SE+I + ETC+G AK+ MGEARMDI SE+GYLG+ DSESYGLTWKVRGFC +K+NPE+FD+VNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNGYHGIIASKRCN +S+QGNEVYGGAE SAGIFLHRS YVHDNGDAG+A LESF+A VS NTFENNKYGVRFSVG ADN F++N I N+ +YN Y+Y G+D PDVV SGR QNNVFS N GA+E IK+KE+D QFLDN F D +RF+++T +M GN+GLD E ELKV N ACFDG +DSG+EPVC
Sbjct: 44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 642 bits (1656), Expect = 2.270e-216 Identity = 329/498 (66.06%), Postives = 399/498 (80.12%), Query Frame = 3
Query: 138 TSTFKRSMLAVGSLVLAAAANTPSPNDAISKPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 1631
T+ K +++ + +L LAA +T SPN+ I KPEC+ + +S+RYS RLYLESAD+ TRGGCVTL IW + G+APLYAVD + IS+ TGTWLLTE+L+VEDGITL+VHG+S GGD+DELRLLS + TFINLRAHGGSLDFLSTKVF+WD S N PD + DGRSY+SAVSE+I + S+TC+GRAK++MGEARMDI DSEMGYLG+ SESYGLTWKVRGFC +K+N ++F++VNVYGNIY SDIHHN +GVYT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VY+NGYHGIIASKRCN +S+QGNEVYGGA SAGIFLHR XXXXXXXXX DAG+A +ESF+A VS+N FENNKYG+RFSVGS N F +N I ST+Y+ Y+Y GSD PDVV+SGR Q+NVF N I+G E+IKL ++D QF+DNTF D T +RFND+ +M GN GL++ + LKV NGA FD SSD GFEP+
Sbjct: 3 TNMGKSALVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSK--LKVVNGASFDASSDYGFEPI 498
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 625 bits (1611), Expect = 4.780e-210 Identity = 306/468 (65.38%), Postives = 372/468 (79.49%), Query Frame = 3
Query: 228 KPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPV 1631
KP+C+S+ +SVRY+ +ARLY+ESA+ TRGGCVTL IW + +PLYAVDP + +S TGTWLLTE++YVEDGITLQVHG S GGD+DELRLLS + TFI+LRA+GGSLDFLSTKVF+WD S N+PD + +DGRSYISAVSE+I + +TC+GRAK++MGEARMDI +SEM YLG+ +E+YGLTWKVRGFC +K NPE+FD+VNVYGNIY SDIHHN +GVYT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN V+NNGYHGIIASKRCN +S+QGNEVYGG+ SAGIFLHRS YVHDNGDAG+A LESF+A VS+NTFENNKYGVR SVG N F+ N I S ++N ++Y G+D P+VV+SGR Q+NVF N I+G E+I LKE+D QF+DNTF D +RF D+T +M GN+GL + LKV GA FD SSD GFEP+
Sbjct: 7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLA--DSTLKVDRGATFDESSDHGFEPI 472
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 598 bits (1543), Expect = 1.740e-199 Identity = 302/481 (62.79%), Postives = 352/481 (73.18%), Query Frame = 3
Query: 192 AANTPSPNDAISKPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1634
AANT S N AI+KP C S+ +S+RYS T+ RLYLESAD +TRGGCVTL DIW G APLYAV P + +S +TGTWLLTE LYVEDGITLQVHG S GG +DELRLLS + FINLRAHGGSLDF+STKVF+WD S N + + GRSYISAVSE+I ++ + CDGRAK +MGEARMDI DSEM YLG+ SESYGLTWKVRG C + +N E+FD VNVYGNIY SDIHHNY+GVYT+GH+QGDWR N M NT YGFDPHDDSD++TIHDN VYNNG HGIIASKRCN GA S GIFLHRS YVHDNGDAGMA +E+F+A VSNN FE+NKYG+R SVG ADN F+ N I S+KYNVYTY+GSD P VV+SGR Q+ G E +KL +D +F+DNTF +RF D G +M GNSGL LKV++G+CFD SDS ++PVC
Sbjct: 21 AANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLG--GASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 575 bits (1483), Expect = 3.970e-189 Identity = 285/480 (59.38%), Postives = 361/480 (75.21%), Query Frame = 3
Query: 198 NTPSPNDAISKPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAG------KAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDA-------STFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACF 1598
+TPSPN I KPECNST +S+RYS TT RLYLE+ RGGCVT+ IW AR G KAPLYAVDPV+ S+ +TGTWLL EDLYVEDGITL+V G+ GG +DELRL S T+INLRAHGGSLDF TKVF WD + NS D++ TDGRSYISAVSE++++ ++TC+G AK+ MGEARMDIV+SEMGY+GF DSESYGLTWKVRGFC +K+NPE+FD+VNVYGNIY S++HH + VYT+GHQQGDWR NT+ N+GYG+DPHDDSD++TIHDNVVY+N +HGIIASKRCN++S+QGN VYGG + SAGIFLHRS + + NGDAGMA LES +A +S N FE NKYG+R SVG DN+ ++N + N+++Y +YTY+GSD +V +GR Q+N+F N +VG +AIKLKESD + +N F + + F+++T V+ GN GL+ D E+++ ACF
Sbjct: 102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLE-DATEVELVEPACF 580
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 571 bits (1471), Expect = 1.040e-188 Identity = 299/504 (59.33%), Postives = 352/504 (69.84%), Query Frame = 3
Query: 129 LATTSTFKRSMLAVGSLVL--AAAANTPSPNDAISKPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1634
+AT +T R+ V L A AANT S N AISKP C S+ +S+RYS ++ RLYLESAD TRGGCVTL +IW G APLYAV P + +S TGTWLLTEDLYVEDGITLQVHG+S GG+++ELRLLS + FINLRAHGGSLDF+STKVF+WD S N + + RSYISAVSE+I ++ E CDG+AK MGEARMDI DSEM YLG+ SESYGLTWKVRGFC + +NPE+FDEVNVYGNIY SDIHHN++GVYT+GH+QGDWR N M N YGFDPHDDSD++TIHDN V G+ S GIFLHRS NGDAGMA +ESF+A VSNN FE+NKYGVR SVG ADN F+ N I +S+KYNVYTYEGSD P VV+SGR Q+N+FS N I G DE+IKL +D +F+DNTF RF D+ +M GN+GL LKVS GACFD SDS ++PVC
Sbjct: 1 MATATTMLRTAAIVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLG--SATLKVSKGACFDKKSDSDYKPVC 502
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 555 bits (1429), Expect = 5.440e-184 Identity = 266/360 (73.89%), Postives = 306/360 (85.00%), Query Frame = 3
Query: 255 ISVRYSGTTARLYLESADN-STRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTK 1331
+S+RY+ +TARLYLESADN +TRGGCVTLG IW +RAGK PLYAVDP + +S TGTWLLTE+LYVEDGITL+V+GS GGD+DELRLLS TFINLRAHGGSLDF+STKVFSWD STNSPD + TDGRSYISA+SE+I + ETC+G AK+ MGEARMDI SE+GYLG+ DSESYGLTWKVRGFC +K+NPE+FD+VNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNGYHGIIASKRCN +S+QGNEVYGGAE SAGIFLHRS YVHDNGDAG+A LESF+A VS NTFENNKYGVRFSVG ADN F++N I N+ +
Sbjct: 44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 439 bits (1130), Expect = 9.900e-141 Identity = 216/307 (70.36%), Postives = 255/307 (83.06%), Query Frame = 3
Query: 132 ATTSTFKRSMLAV-GSLVLAAAANTPSPNDAISKPECNSTNPISVRYSGTTARLYLESADNSTRGGCVTLGDIWTARAGKAPLYAVDPVNHTISEEVTGTWLLTEDLYVEDGITLQVHGSSVGGDSDELRLLSDASTFINLRAHGGSLDFLSTKVFSWDNSTNSPDVNLTDGRSYISAVSELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHG 1049
+ TS+F ++L + + + AAAA+T SPND ISKP+C+S +S+RY+ +T RLYLESAD TRGGCVTLG IW RAGKAPLYAVDP + SE TGTWLLTE+LYVEDGITL+V+G+ GGD+DELRLLS T+INLRAHGGSLDF+ TKVFSWD STNSPD + TDGRSYISA+SE+I + ETC+G AK+ MGEARMDI +SE+GYLGF DSESYGLTWKVRGFC +K+NP IFDEVNVYGN+Y SDIHH +G+YT+GHQQGDWR N M DN+GYGFDPHDDSD++TIHDN VYNNG HG
Sbjct: 6 SATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 2.710e-129 Identity = 201/322 (62.42%), Postives = 237/322 (73.60%), Query Frame = 3
Query: 669 ELIVNASETCDGRAKSDMGEARMDIVDSEMGYLGFLDSESYGLTWKVRGFCTNKTNPEIFDEVNVYGNIYGSDIHHNYYGVYTFGHQQGDWRNNTMRDNTGYGFDPHDDSDYITIHDNVVYNNGYHGIIASKRCNDISVQGNEVYGGAEVSAGIFLHRSXXXXXXXXXYVHDNGDAGMAFLESFSATVSNNTFENNKYGVRFSVGSADNYFTDNAILNSTKYNVYTYEGSDGPDVVESGRPQNNVFSGNLIVGADEAIKLKESDDMQFLDNTFVDTTNLRFNDSTGVVMIGNSGLDLDEVELKVSNGACFDGSSDSGFEPVC 1634
E+I ++ E C+G+AK MGEARMDI DSEM YLG+ SESYGLTWKVRGFC + +NPE+FDEVNVYGNIY SDIHHN++GVYT+GH+QGDWR N M N YGFDPHDDSD++TIHDN VYNNG HGIIASKRCN G+ S GIFLHRS Y DNGDAGMA +ESF+A VSNN FE+NKYGVR SVG ADN F+ N I +S++YNVYTYEGSD P VV+SGR Q+N+FS N I G DE+IKL +D +F+DNTF +RF D+ +M GN+GL LKVS GACFD SDS ++PVC
Sbjct: 6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLG--SATLKVSKGACFDKKSDSDYKPVC 325 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1148.1252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1148.1252.1 >prot_F-serratus_M_contig1148.1252.1 ID=prot_F-serratus_M_contig1148.1252.1|Name=mRNA_F-serratus_M_contig1148.1252.1|organism=Fucus serratus male|type=polypeptide|length=512bp MCLRSGSLATTSTFKRSMLAVGSLVLAAAANTPSPNDAISKPECNSTNPIback to top mRNA from alignment at F-serratus_M_contig1148:221579..229489+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1148.1252.1 ID=mRNA_F-serratus_M_contig1148.1252.1|Name=mRNA_F-serratus_M_contig1148.1252.1|organism=Fucus serratus male|type=mRNA|length=7911bp|location=Sequence derived from alignment at F-serratus_M_contig1148:221579..229489+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1148:221579..229489+ >mRNA_F-serratus_M_contig1148.1252.1 ID=mRNA_F-serratus_M_contig1148.1252.1|Name=mRNA_F-serratus_M_contig1148.1252.1|organism=Fucus serratus male|type=CDS|length=3072bp|location=Sequence derived from alignment at F-serratus_M_contig1148:221579..229489+ (Fucus serratus male)back to top |