prot_F-serratus_M_contig1145.1246.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1145.1246.1
Unique Name	prot_F-serratus_M_contig1145.1246.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	202

Homology

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BLAST of mRNA_F-serratus_M_contig1145.1246.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 8.930e-55
Identity = 97/171 (56.73%), Postives = 127/171 (74.27%), Query Frame = 0

Query:   33 TDDRAYAERLQQEEFRNAQQFSQASLRKPRGHPV-PTTDGTQYVAMYPPSNAFDPADLGVSGNFMAPHEVRLMQAFAMGRTVRIFAVLDGILLLLQCAWYPILFLLLAWAPLAGWMAGTRFSTAWTYAYAAYCVLRLSNDLAYIFIGYYWSIFTFLVDVIIARYVFRFARV 202
            T+D   A+RLQQEE+RNA       L   RG PV P   GTQYVA++PPS  FDPADLGV+G FMAPHE +LM+A ++ +T+R  AV DG++L++ C ++P+L LLL W PL+GWMAGTR+STAWTYAY  Y +LRLS  L+Y+F GY+W IF F + + IAR ++RFA+V
Sbjct:   37 TNDEDLAQRLQQEEYRNA-------LPAARGMPVQPGAPGTQYVAIFPPSVPFDPADLGVAG-FMAPHEAKLMEASSLAKTIRWLAVFDGLILVINCGYFPMLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGYFWFIFLFALSLYIARVIWRFAKV 199

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1145.1246.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1145.1246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KAV0_9PHAE	8.930e-55	56.73	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..114
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 142..171
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 172..197
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 198..202
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 115..141
None	No IPR available	TMHMM	TMhelix		coord: 121..143
None	No IPR available	TMHMM	TMhelix		coord: 175..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1145	contig	F-serratus_M_contig1145:117655..135821 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1145.1246.1	mRNA_F-serratus_M_contig1145.1246.1	Fucus serratus male	mRNA	F-serratus_M_contig1145 117655..135821 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1145.1246.1 ID=prot_F-serratus_M_contig1145.1246.1|Name=mRNA_F-serratus_M_contig1145.1246.1|organism=Fucus serratus male|type=polypeptide|length=202bp
MPKPRPTSTDAEYYTRGSYQQGGDEERQGAGRTDDRAYAERLQQEEFRNA
QQFSQASLRKPRGHPVPTTDGTQYVAMYPPSNAFDPADLGVSGNFMAPHE
VRLMQAFAMGRTVRIFAVLDGILLLLQCAWYPILFLLLAWAPLAGWMAGT
RFSTAWTYAYAAYCVLRLSNDLAYIFIGYYWSIFTFLVDVIIARYVFRFA
RV