mRNA_F-serratus_M_contig1144.1240.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1144.1240.1
Unique NamemRNA_F-serratus_M_contig1144.1240.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: M1EYI5_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=Fucales TaxID=3009 RepID=M1EYI5_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 4.810e-123
Identity = 179/190 (94.21%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  143 RAPGMGMHRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSG 332
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: M1F017_SARFS (Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=Fucales TaxID=3009 RepID=M1F017_SARFS)

HSP 1 Score: 359 bits (922), Expect = 2.880e-122
Identity = 178/190 (93.68%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSW+ATMWGGSIRLKTPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  143 RAPGMGMHRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWVATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSG 332
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: A0A0U4ZTN0_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U4ZTN0_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 1.210e-121
Identity = 178/190 (93.68%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TF+RKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLAN+ 
Sbjct:   95 RAPGMSMHRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANSG 284
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: O99385_9STRA (Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=PX clade TaxID=569578 RepID=O99385_9STRA)

HSP 1 Score: 356 bits (914), Expect = 1.680e-121
Identity = 176/190 (92.63%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TF+RKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSIRL+TPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  159 RAPGMTMDRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIRLQTPMLFSIGFLFLFTIGGLTGVVLANSG 348
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: A0A0U1XAH8_SARHM (Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XAH8_SARHM)

HSP 1 Score: 360 bits (923), Expect = 1.930e-120
Identity = 179/190 (94.21%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  198 RAPGMGMHRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSG 387
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: A0A1L6KY02_9PHAE (Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum fluitans TaxID=143163 RepID=A0A1L6KY02_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 1.930e-120
Identity = 179/190 (94.21%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TFSRKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  198 RAPGMGMHRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFSRKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSG 387
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: E6ZES6_ECTSI (Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES6_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 1.650e-119
Identity = 176/190 (92.63%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGI+SHIL TF+RKP+FGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIAT+WGGSIRLKTPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  199 RAPGMTMDRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHILSTFARKPVFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATLWGGSIRLKTPMLFSIGFLFLFTIGGLTGVVLANSG 388
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: A0A453HT52_AEGTS (Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453HT52_AEGTS)

HSP 1 Score: 350 bits (897), Expect = 6.030e-119
Identity = 166/190 (87.37%), Postives = 180/190 (94.74%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVL+TAFLLLLSLPVLAG ITMLLTDRNFNTTFFDPAGGGDP+LYQHLFWFFGHPEVYILILPGFGI+SHI+ TFSRKP+FGYLGMVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI+ KTPMLFA+GF+FLFTIGGLTG+VLAN+ 
Sbjct:    2 RGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSG 191
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: A0A8F0K0Q8_9PHAE (Cytochrome c oxidase subunit 1 n=5 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0Q8_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 7.960e-119
Identity = 174/190 (91.58%), Postives = 182/190 (95.79%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHIL TF+RKP+FGYLGMVYAMLSIG+LGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSW+AT+WGGSIR+KTPMLF+IGFLFLFTIGGLTGVVLAN+ 
Sbjct:  198 RSPGMTMERLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILATFARKPVFGYLGMVYAMLSIGMLGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWVATLWGGSIRIKTPMLFSIGFLFLFTIGGLTGVVLANSG 387
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BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Match: D3DEZ9_ORYRU (Cytochrome c oxidase subunit 1 n=1 Tax=Oryza rufipogon TaxID=4529 RepID=D3DEZ9_ORYRU)

HSP 1 Score: 350 bits (897), Expect = 3.030e-118
Identity = 166/190 (87.37%), Postives = 180/190 (94.74%), Query Frame = 1 
Query:    1 REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLGMVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNS 570
            R  G    RLPLFVWSVL+TAFLLLLSLPVLAG ITMLLTDRNFNTTFFDPAGGGDP+LYQHLFWFFGHPEVYILILPGFGI+SHI+ TFSRKP+FGYLGMVYAM+SIG+LGF+VWAHHMFTVGLD+DTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI+ KTPMLFA+GF+FLFTIGGLTG+VLAN+ 
Sbjct:  175 RGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSG 364
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1144.1240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M1EYI5_9PHAE4.810e-12394.21Cytochrome c oxidase subunit 1 (Fragment) n=7 Tax=... [more]
M1F017_SARFS2.880e-12293.68Cytochrome c oxidase subunit 1 (Fragment) n=4 Tax=... [more]
A0A0U4ZTN0_9PHAE1.210e-12193.68Cytochrome c oxidase subunit 1 (Fragment) n=8 Tax=... [more]
O99385_9STRA1.680e-12192.63Cytochrome c oxidase subunit 1 (Fragment) n=3 Tax=... [more]
A0A0U1XAH8_SARHM1.930e-12094.21Cytochrome c oxidase subunit 1 n=118 Tax=Phaeophyc... [more]
A0A1L6KY02_9PHAE1.930e-12094.21Cytochrome c oxidase subunit 1 n=1 Tax=Sargassum f... [more]
E6ZES6_ECTSI1.650e-11992.63Cytochrome c oxidase subunit 1 n=691 Tax=Phaeophyc... [more]
A0A453HT52_AEGTS6.030e-11987.37Cytochrome c oxidase subunit 1 n=1 Tax=Aegilops ta... [more]
A0A8F0K0Q8_9PHAE7.960e-11991.58Cytochrome c oxidase subunit 1 n=5 Tax=Laminariale... [more]
D3DEZ9_ORYRU3.030e-11887.37Cytochrome c oxidase subunit 1 n=1 Tax=Oryza rufip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1144contigF-serratus_M_contig1144:195700..196284 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score342.8
Seed ortholog evalue1e-91
Seed eggNOG ortholog4513.MLOC_370.1
KEGG koko:K02256
KEGG TC3.D.4.11,3.D.4.7,3.D.4.8
KEGG Pathwayko00190,ko01100,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00154
Hectar predicted targeting categorysignal peptide
GOsGO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016310,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0022900,GO:0022904,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:1901135,GO:1901360,GO:1901564,GO:1902600
EggNOG free text desc.Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
EggNOG OGs37QZZ@33090,3GEEJ@35493,3IAIW@38820,3KME8@4447,COG0843@1,KOG4769@2759
EC1.9.3.1
COG Functional cat.C
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Exons1
Model size585
Cds size585
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929045.7170959-CDS-F-serratus_M_contig1144:195699..1962841622929045.7170959-CDS-F-serratus_M_contig1144:195699..196284Fucus serratus maleCDSF-serratus_M_contig1144 195700..196284 +
1690962680.2554057-CDS-F-serratus_M_contig1144:195699..1962841690962680.2554057-CDS-F-serratus_M_contig1144:195699..196284Fucus serratus maleCDSF-serratus_M_contig1144 195700..196284 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1144.1240.1prot_F-serratus_M_contig1144.1240.1Fucus serratus malepolypeptideF-serratus_M_contig1144 195700..196284 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1144.1240.1

>prot_F-serratus_M_contig1144.1240.1 ID=prot_F-serratus_M_contig1144.1240.1|Name=mRNA_F-serratus_M_contig1144.1240.1|organism=Fucus serratus male|type=polypeptide|length=195bp
REQGNIRFRLPLFVWSVLITAFLLLLSLPVLAGGITMLLTDRNFNTTFFD
PAGGGDPVLYQHLFWFFGHPEVYILILPGFGIVSHILGTFSRKPIFGYLG
MVYAMLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIFS
WIATMWGGSIRLKTPMLFAIGFLFLFTIGGLTGVVLANNSGVIL*
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mRNA from alignment at F-serratus_M_contig1144:195700..196284+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1144.1240.1 ID=mRNA_F-serratus_M_contig1144.1240.1|Name=mRNA_F-serratus_M_contig1144.1240.1|organism=Fucus serratus male|type=mRNA|length=585bp|location=Sequence derived from alignment at F-serratus_M_contig1144:195700..196284+ (Fucus serratus male)
CGTGAACAGGGAAATATTCGTTTTCGTTTACCTTTATTTGTTTGGTCGGT
TTTAATTACAGCATTCTTACTTTTGCTGTCGCTTCCTGTTTTAGCTGGCG
GTATTACTATGCTGTTGACTGATCGGAATTTTAATACTACGTTCTTTGAT
CCAGCTGGTGGTGGTGATCCTGTTCTTTACCAACATTTATTTTGGTTTTT
TGGACACCCCGAAGTTTATATTTTAATCTTGCCTGGTTTTGGTATCGTTA
GTCACATTTTAGGTACTTTTTCCAGAAAGCCTATTTTTGGTTATTTGGGG
ATGGTTTATGCGATGCTTTCTATTGGTATTCTTGGATTTATCGTGTGGGC
TCATCACATGTTTACTGTAGGATTAGACATAGATACTCGTGCTTATTTTA
CCGCAGCTACTATGATTATTGCAGTTCCAACTGGTATTAAAATTTTTAGT
TGGATTGCCACTATGTGGGGAGGTTCTATCAGACTTAAAACACCTATGTT
ATTTGCGATAGGTTTCCTTTTTTTATTTACCATTGGCGGTTTAACTGGTG
TGGTATTAGCAAATAATTCAGGTGTTATATTATAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1144:195700..196284+

>mRNA_F-serratus_M_contig1144.1240.1 ID=mRNA_F-serratus_M_contig1144.1240.1|Name=mRNA_F-serratus_M_contig1144.1240.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig1144:195700..196284+ (Fucus serratus male)
CGTGAACAGGGAAATATTCGTTTTCGTTTACCTTTATTTGTTTGGTCGGT
TTTAATTACAGCATTCTTACTTTTGCTGTCGCTTCCTGTTTTAGCTGGCG
GTATTACTATGCTGTTGACTGATCGGAATTTTAATACTACGTTCTTTGAT
CCAGCTGGTGGTGGTGATCCTGTTCTTTACCAACATTTATTTTGGTTTTT
TGGACACCCCGAAGTTTATATTTTAATCTTGCCTGGTTTTGGTATCGTTA
GTCACATTTTAGGTACTTTTTCCAGAAAGCCTATTTTTGGTTATTTGGGG
ATGGTTTATGCGATGCTTTCTATTGGTATTCTTGGATTTATCGTGTGGGC
TCATCACATGTTTACTGTAGGATTAGACATAGATACTCGTGCTTATTTTA
CCGCAGCTACTATGATTATTGCAGTTCCAACTGGTATTAAAATTTTTAGT
TGGATTGCCACTATGTGGGGAGGTTCTATCAGACTTAAAACACCTATGTT
ATTTGCGATAGGTTTCCTTTTTTTATTTACCATTGGCGGTTTAACTGGTG
TGGTATTAGCAAATAATTCAGGTGTTATATTATAACGTGAACAGGGAAAT
ATTCGTTTTCGTTTACCTTTATTTGTTTGGTCGGTTTTAATTACAGCATT
CTTACTTTTGCTGTCGCTTCCTGTTTTAGCTGGCGGTATTACTATGCTGT
TGACTGATCGGAATTTTAATACTACGTTCTTTGATCCAGCTGGTGGTGGT
GATCCTGTTCTTTACCAACATTTATTTTGGTTTTTTGGACACCCCGAAGT
TTATATTTTAATCTTGCCTGGTTTTGGTATCGTTAGTCACATTTTAGGTA
CTTTTTCCAGAAAGCCTATTTTTGGTTATTTGGGGATGGTTTATGCGATG
CTTTCTATTGGTATTCTTGGATTTATCGTGTGGGCTCATCACATGTTTAC
TGTAGGATTAGACATAGATACTCGTGCTTATTTTACCGCAGCTACTATGA
TTATTGCAGTTCCAACTGGTATTAAAATTTTTAGTTGGATTGCCACTATG
TGGGGAGGTTCTATCAGACTTAAAACACCTATGTTATTTGCGATAGGTTT
CCTTTTTTTATTTACCATTGGCGGTTTAACTGGTGTGGTATTAGCAAATA
ATTCAGGTGTTATATTATAA
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