mRNA_F-serratus_M_contig1140.1228.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1140.1228.1
Unique NamemRNA_F-serratus_M_contig1140.1228.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 8.360e-113
Identity = 215/516 (41.67%), Postives = 311/516 (60.27%), Query Frame = 1
Query:   19 DNQSDQVVRVVNSHNVFLLDCKSSRKNEINRLRSFIATVAYS--RDYSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRRGDPKTSKCYVFFDDALVLFKDLW--KAMGIGYTPERAGEVFSNAIELNEAQGWILLTNRDGSVDDKCGGQV----NRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEALIRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQ-APPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYRERLVLIYESRISERQSSIVCCAKGDANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLGKDLEDHMNLRFDELEKRSERIANGVNAYLHAELGVLRGHLEGIERNIDFAAALAGKCLLVSSK 1539
            DN+  + +RVV    +  L+   S       LR  I  VAY     YSFPSV +++P P + A  TLEA+R G  LRG  GE   V  RL+          +V F +AL  F ++   K M  G   E A  VF  AI+L+E QG ILLT  DG      GG++    +   LV+H++P  FAD++RRIVDVRL+D A   + K A +  ++     S+ +LS+Q  RF+ AGE+N+ Y+RFLW  R+LELG A+   APP+EM+E+D+  +V SL+D+R MF VR++      D+Y+V +CLPDH+GC+M P+ L+EL  G A+F   L+ VG  ++PPGL+PRLLAWCG+G+ RITACW+ G CF+++E LVL+YE R + R + I C A G A+ E A   LED+  EL +L+ D +YGFPG+ L   G  +K +V+    LE LL R   +L++ +N++ +EL ++ + IA GV  +L      +    E +   +D  AA+  +CLLVS++
Sbjct:  228 DNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGA-RVFLAAIKLHEVQGAILLTRADG------GGEMEDMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADL--IKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNE-----DHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFKEHLVLLYEHRDAGR-AVIECHAMGSAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAE 728          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 9.400e-111
Identity = 216/523 (41.30%), Postives = 305/523 (58.32%), Query Frame = 1
Query:   19 DNQSDQVVRVVNSHNVFLLDCKSSRKNEINRLRSFIATVAYS--RDYSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRR----GDPKTSKCYVFFDDALVLFKDLWKAMGI-GYTPERAGEVFSNAIELNEAQGWILLTNRDGSVDDKCGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEALIRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQ--APPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTY-RERLVLIYESRISERQSSIVCCAKGDANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLGKDLEDHMNLRFDELEKRSERIANGVNAYLHA---ELGVLRGHL-----EGIERNIDFAAALAGKCLLVS 1533
            D++  Q +R+V    +  L+   S      +L+     VAY     YSFPSV S++P P + A  TLEA+R GA LRG  G+   V+ RL       G P     ++ F +AL LF ++     + G       + F  AI L+E QG IL+T  DG  + +     +   LV+HV+P  FAD++RRIVDVRL+D A + K+ E + R        S+AELS+Q  RF+ AGEV+K Y++FLW  R+LELG A+    APP EM+E+ +  MV SL+ +R MF VR +      D+Y+V +CLPDH+GC +  + LL L+ G A+F  +LQ+ G + +PPGL+PRLLAWC +G+ RIT CW+ G CF + R+ LVL+YE R    +S I C A G A+ E AGG L+D+  EL RL+ D +YGFPGI L  +G +E  +     +L+KLL R   +L+DHMN+ F EL ++S  IA GV  +L     E+     H      + + R +D  AA+  KCLLVS
Sbjct:  396 DSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQP-----FILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKR----QSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNK-----DHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHLVLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVS 904          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 2.010e-110
Identity = 207/470 (44.04%), Postives = 298/470 (63.40%), Query Frame = 1
Query:   22 NQSDQVVRVVNSHNVFLLDCKSSRKNEINRLRSFIATVAYSR--DYSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRRGDPKTSKCYVFFDDALVLFKDLWKAM--GIGYTPERAGE---VFSNAIELNEAQGWILLTNRDGSVDDK------CGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEAL--IRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYRERLVLIYESRISERQSSIVCCAKGD-ANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLGKDLEDHMNLRF 1383
            N   Q +RVV    +  LD  SS   +I+ L+  +  +AY+    YSFPSV S +P P++ A  TLEA+R GADLRG      AV  RL   GDPK  + +V F +A+ LF     +M   +     RAGE   +F  A++ +EA G ILLT  DG    +       G   + + L++HV+P RFAD+VRR+VDVRLVD   + KV+EA+     VR      L  L+ Q +RF  AGEV+K+YL+FLWL R+++LG+A+++APP+EM+E DVE MVGSL+D+R M+ VR     ++PD YVV +CLP+  G  + P  +LEL  GSA++  +L++VG   +PPGL+PRLLAWCGRGEGRI ACW+ G CF ++  LVL+YE R  +  S I C A+G+ ++ ++A   L+DI +++  LI+D +YGFPG+ L R G+ E+  ++ D+D + LL+R+   L D MN++F
Sbjct:  538 NPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGE-GDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPM----LLTLTDQHKRFVKAGEVSKDYLKFLWL-RDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFKNHLVLLYEVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLVRSGESEETVISSDSDHKALLERIVDVLRDQMNVKF 1001          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 7.250e-106
Identity = 201/483 (41.61%), Postives = 289/483 (59.83%), Query Frame = 1
Query:   40 VRVVNSHNVFLLDCKSSRKNEINRLRSFIATVAYSR--DYSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRRGDPKTSKCYVFFDDALVLFKDLWKAMGIGYTPERAGE---------------------------VFSNAIELNEAQGWILLTNRDGSVDDK------CGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEALIRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYRERLVLIYESRISERQSSIVCCAKGDANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLGKDLEDHMNLRF 1383
            +RVV   ++  LD  SS   +I  L+  +  +AY+    YSF SV S +P P++    TLEA+RLGADLRG  G   AV+ RL R GDP+  + +V F +A+ L +   +   +      A                             +F  AI+ +EA G ILLT  DG    +       G   + + L++HV+P RFAD+VRR+VDVRLVD   + KV++A+      +    L  L+ Q +RF  AGEV+K+YL+FLWL R++ELGQA+ +APP+EM+E DV+ MVGSL+D+R M+ VR     ++PD YVV +CLP+  G E+ P  +LEL  GSA++  +L++VG   +PPGL+PRLLAWCGRGEG I ACW+ G CF ++  +VL+YE R +   S I C A+G    E+A   L DI ++++ LI+DR+YGFPG+ L R G+ E+  V+ D D E L++R+   L D MN++F
Sbjct:  248 LRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRL-REGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAAC--PSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWL-RDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFKNHMVLLYEVRDTAGNSWIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGLIR-GESEEALVSSDGDHEALVKRIVNMLRDQMNVKF 725          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 8.720e-68
Identity = 154/398 (38.69%), Postives = 230/398 (57.79%), Query Frame = 1
Query:  229 GADLRGVSGEMTAVLDRLSRRGDPKTSKCYVFFDDALVLFKDLWKAMGIGYTPE---RAGE---VFSNAIELNEAQGWILLTNRDGSVDDK------CGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEAL--IRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYRERLVLIYESRISERQSSIVCCAKGDANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLGKDLEDHMNLR 1380
            GADLRG      AV  RL R G+PK  + +V F +A+ LF    +   + +      R  E   +F  A++ +EA G I LT  DG    +       G   + + L++HV+P RFAD+VRR+VDVRLV    + KV+EA+     VR     SL  L+ Q +RF   GEV+K+YL+FLWL R+++L +A+++APP+EM+E DVE MV SL+D+R M+ VR     ++PD YVV +CLP+  G ++ P  +LEL  G+A++  +L++V    +PPGL+PRLL+                 C      LVL+YE R ++  S I C A+G+   E+A   L+DI +++D LI D +  FPG+ L R G+ E+  V  D+D + LL+R+     D MN++
Sbjct:  344 GADLRGSGSTREAVAQRL-REGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRS----SLLTLTDQHKRFIKTGEVSKDYLKFLWL-RDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS-----------------C-----HLVLLYEVRATDGTSWIECHARGNVFDESARTALKDIGDQVDELISDHKNRFPGLGLVRSGESEETVVYSDSDHKALLERIVDVQRDQMNVK 713          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.960e-51
Identity = 107/245 (43.67%), Postives = 151/245 (61.63%), Query Frame = 1
Query:  403 VFSNAIELNEAQGWILLTNRDGSVDDKCGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEAL--IRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYRERLVLIYESR 1131
            +F  AI+  E  G ILLT  DG+             L++HV+  RFAD++               KVKEA+     VR      L  L+ Q +RF  AGEV+K+YL+FLWL R++ELGQA+++AP +EM+E DVE MV S +DLR+++ VR     ++PD  VV +CLP+  G E+ P ++LEL   SA++  +L++V    +PPGL+PR LAWCGRGEGRI ACW+ G CF ++  L+L+ E R
Sbjct:   27 IFLAAIKSQETHGAILLTGVDGA------------DLIIHVNLSRFADLL---------------KVKEAMEACPSVRPM----LLTLTDQHKRFVKAGEVSKDYLKFLWL-RDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAGPEVDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELAWCGRGEGRINACWKRGVCFAFKNHLMLLNEVR 239          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.030e-24
Identity = 64/183 (34.97%), Postives = 98/183 (53.55%), Query Frame = 1
Query:  835 MFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYRERLVLIYESRISERQSSIVCCAKGDANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLGKDLEDHMNLRF 1383
            M+ VR     ++PD YVV  C P+  G  + P  + +           L++VG   +PPGL+PRLLAWCGRGEGR   C + G     ++ LVL+ E R +   S I C  +G+   E+ G VL+D   ++  L  D +YGFPG+ L  + ++ +     D D + L++R+   L D  N+R+
Sbjct:    1 MYRVRDGHHAFVPDRYVVHYCFPNTDGRRVDPGKIFQT----------LKLVGAHAVPPGLVPRLLAWCGRGEGRYKECCKRGLLLEIKKHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGLSYD-EVSETDFDLDGDDKALVERIKSILRDQTNVRW 172          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 2.720e-24
Identity = 117/452 (25.88%), Postives = 202/452 (44.69%), Query Frame = 1
Query:   97 NEINRLRSFIATVAYSR-DYSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRRGDPKTSKCYVFFDDALVLFKDLWKAM---------GIGYTPERAGEVFSNAIELNEAQGWILLTNRDGSVDDKCGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEALIRFVRETKGVSLA---ELSRQQERFYTAGEVNKNYLRFLWLHRELELGQATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYR----ERLVLIYESRISER----QSS---IVCCAKGDANTETAGGVLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQR-----LGKDLED 1365
            N I RL  +I  VA  +  +SFP+V + +P  W+ A   +EA+                      +G P     YV + DA+  F+  ++               + E A      A++  EA+G ++L+ RD S   +          ++HVDP    ++VRR+ D  LVD   + K+ + L+ + R T+  +L+    L      F   G +N++YLRFLW+HR+LE+      A   ++ +   ++MV +++    ++P      +   D ++V A LP+H    +  ES+     G  +       + + + P G++ R LA+          CW+HG    ++    E  VL+ E+ I +     QS+   I  C KG   T  A GVL ++ E+L  L+ D  +G+PG+ L      E++ + Q +  +   +R     L K LED
Sbjct: 1486 NRIGRLSDWIIGVAPEKISFSFPAVATILPAAWVDAIAAVEALH-------------------KEKGTP-----YVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSD--------MIHVDPRWLIELVRRVTDHNLVDKKKQNKILQELLEYDR-TRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGA---QLDKDAFDSMVDTMIKYLFIYPSHGECSN-AEDCHIVPARLPEHGNDNILEESI---GLGEVVVGKTAWFLRS-HAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPGQSTFPAIAICVKG--KTAEAKGVLREVGEQLLSLLQDNIHGYPGLRL---PIFEELNITQSDQFQVHFERYLATQLAKILED 1891          
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.990e-14
Identity = 97/405 (23.95%), Postives = 173/405 (42.72%), Query Frame = 1
Query:   97 NEINRLRSFIATVAYSR-DYSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRRGDPKTSKCYVFFDDALVLFKDLWKAMGIGYTPERAGEVFSNAIELNEAQGWILLTNRDGSVDDKCGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPKVKEALIRFVRETKGVSLA---ELSRQQERFYTAGEVNKNYLRFLWLHRELEL--GQATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACLPDHLGCEMTPESLLELNFGSAMFRSELQIVGTR-----NMPPGLMPRLLAWCGRGEGRITACWRHGGCFTYR----ERLVLIYESRISE-------RQSSIVCCAKGDANTETAGGVLEDITEELDRLIHD 1245
            N +NRL  +I  V+  +  +SFP+V + +P+ W+     ++A +     +          +R   R  P +                           E A      A++  EA+G ++L+ R+ S   +          ++HVDP    D+VRR+ D  LVD  ++ ++ + L+ + R T+  +L+    L      F   G +N+ YLRFLW+HR+LE+  G A  Q     +     ++MV +++    ++P           +Y+V A LP     E+  +++LE + G      E+ +  T      + P G++   LA+          CW+HG    ++    E  +L+ E+ I +          +I  C KG   T  A GVL ++ E+L  L+ D
Sbjct:   58 NRVNRLSDWIIDVSTEKISFSFPAVATILPSAWVLWGDAVKAFQRYFQEKHKE-------EREDERNKPLSD--------------------------EEASSNLKEAMKHREAEGGVILSLREESSPAQSD--------MIHVDPRWLIDLVRRVTDHNLVDKKNEHEILKELLEYGR-TRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQ-----LENDTFDSMVDTMIKYLFIYPSHGECSK-AEGFYIVPARLP-----EIGKDNVLEESIGL----DEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGTLPAIAICVKG--KTAEAKGVLREVGEQLLSLLKD 403          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1140.1228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JSN1_9PHAE8.360e-11341.67Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE9.400e-11141.30Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI2.010e-11044.04LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE7.250e-10641.61Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE8.720e-6838.69Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXU4_9PHAE3.960e-5143.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K561_9PHAE1.030e-2434.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK68_ECTSI2.720e-2425.88LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JR01_9PHAE2.990e-1423.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1140contigF-serratus_M_contig1140:178098..179881 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.1
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D7FU35
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1543
Cds size1542
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929042.6912034-CDS-F-serratus_M_contig1140:178097..1795141622929042.6912034-CDS-F-serratus_M_contig1140:178097..179514Fucus serratus maleCDSF-serratus_M_contig1140 178098..179514 +
1690962679.7075756-CDS-F-serratus_M_contig1140:178097..1795141690962679.7075756-CDS-F-serratus_M_contig1140:178097..179514Fucus serratus maleCDSF-serratus_M_contig1140 178098..179514 +
1622929042.7237477-CDS-F-serratus_M_contig1140:179755..1798801622929042.7237477-CDS-F-serratus_M_contig1140:179755..179880Fucus serratus maleCDSF-serratus_M_contig1140 179756..179880 +
1690962679.7226906-CDS-F-serratus_M_contig1140:179755..1798801690962679.7226906-CDS-F-serratus_M_contig1140:179755..179880Fucus serratus maleCDSF-serratus_M_contig1140 179756..179880 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1140.1228.1prot_F-serratus_M_contig1140.1228.1Fucus serratus malepolypeptideF-serratus_M_contig1140 178098..179880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1140.1228.1

>prot_F-serratus_M_contig1140.1228.1 ID=prot_F-serratus_M_contig1140.1228.1|Name=mRNA_F-serratus_M_contig1140.1228.1|organism=Fucus serratus male|type=polypeptide|length=514bp
ARQSALDNQSDQVVRVVNSHNVFLLDCKSSRKNEINRLRSFIATVAYSRD
YSFPSVESQIPTPWMYAFLTLEAIRLGADLRGVSGEMTAVLDRLSRRGDP
KTSKCYVFFDDALVLFKDLWKAMGIGYTPERAGEVFSNAIELNEAQGWIL
LTNRDGSVDDKCGGQVNRSQLVLHVDPVRFADVVRRIVDVRLVDSASKPK
VKEALIRFVRETKGVSLAELSRQQERFYTAGEVNKNYLRFLWLHRELELG
QATKQAPPMEMTEKDVEAMVGSLVDLRMMFPVRKSSRDYLPDYYVVGACL
PDHLGCEMTPESLLELNFGSAMFRSELQIVGTRNMPPGLMPRLLAWCGRG
EGRITACWRHGGCFTYRERLVLIYESRISERQSSIVCCAKGDANTETAGG
VLEDITEELDRLIHDRRYGFPGIELCREGKIEKIRVAQDNDLEKLLQRLG
KDLEDHMNLRFDELEKRSERIANGVNAYLHAELGVLRGHLEGIERNIDFA
AALAGKCLLVSSKD
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mRNA from alignment at F-serratus_M_contig1140:178098..179881+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1140.1228.1 ID=mRNA_F-serratus_M_contig1140.1228.1|Name=mRNA_F-serratus_M_contig1140.1228.1|organism=Fucus serratus male|type=mRNA|length=1784bp|location=Sequence derived from alignment at F-serratus_M_contig1140:178098..179881+ (Fucus serratus male)
GCTAGACAGAGTGCTCTAGATAACCAAAGTGATCAGGTGGTACGCGTTGT GAACAGTCATAATGTGTTCCTGCTTGACTGCAAGAGCTCCAGGAAAAACG AGATCAACCGTCTACGCTCGTTTATCGCGACAGTTGCCTACAGCAGAGAT TATTCCTTTCCTTCCGTAGAGAGTCAGATACCCACGCCATGGATGTATGC ATTCTTGACATTGGAAGCTATAAGACTCGGGGCCGACCTCCGTGGAGTGT CCGGCGAAATGACTGCGGTACTCGACAGGCTTAGTAGGCGAGGGGATCCG AAAACGTCAAAATGCTATGTTTTCTTCGATGACGCGTTGGTGCTTTTCAA GGACCTATGGAAGGCGATGGGTATTGGATATACACCTGAAAGGGCTGGCG AGGTGTTTTCCAATGCAATTGAGTTAAATGAGGCTCAAGGATGGATACTT CTGACCAACAGAGACGGAAGCGTGGACGACAAGTGTGGTGGCCAGGTCAA TCGAAGCCAGCTCGTCCTTCATGTGGACCCCGTTCGGTTTGCTGACGTTG TACGGCGTATTGTCGACGTTCGATTGGTGGACTCAGCCAGTAAGCCGAAG GTCAAGGAGGCACTTATTCGTTTTGTCAGAGAAACGAAAGGAGTTAGCCT CGCTGAGCTTTCGCGTCAACAAGAACGATTCTACACGGCCGGAGAAGTCA ATAAAAACTACCTCAGGTTCCTGTGGCTCCATCGCGAGTTGGAGTTAGGC CAGGCGACCAAGCAAGCTCCCCCGATGGAGATGACGGAAAAGGACGTAGA AGCGATGGTGGGCAGTTTAGTTGACCTACGGATGATGTTTCCTGTCCGGA AAAGTTCTAGGGATTACTTGCCCGATTACTACGTTGTCGGCGCCTGTTTG CCTGACCACTTAGGGTGCGAGATGACCCCAGAATCCCTTCTGGAGCTCAA TTTTGGAAGTGCGATGTTTCGTTCGGAGCTGCAGATAGTCGGGACGAGAA ACATGCCGCCGGGACTTATGCCAAGGTTGCTTGCATGGTGCGGACGCGGC GAAGGGCGGATCACCGCGTGCTGGCGACATGGAGGATGTTTCACGTACAG GGAACGCTTGGTACTGATTTACGAGTCGAGAATTTCCGAGAGACAATCAT CGATTGTGTGCTGCGCCAAAGGGGACGCGAACACGGAGACAGCCGGAGGT GTATTAGAGGACATCACCGAAGAGTTAGACCGTCTCATTCATGACCGACG CTATGGGTTCCCAGGCATCGAGCTATGTAGAGAGGGTAAAATTGAAAAAA TAAGAGTGGCCCAAGATAACGACCTGGAGAAGTTGCTGCAAAGACTCGGA AAAGATCTAGAAGATCATATGAACCTAAGATTCGATGAACTGGAGAAGCG ATCGGAGCGCATCGCGAGTGAGTCAAATCTAGGCTGTGGTCTTTTAAAGT TGTACCTAAAAGCTAAAGTGCTTGGCACTAAGGAGAGGAAAATAATCGCT ACAGTATGTCTGGTCACCGACGTAAATATAAACTCTGAACTCCGATGGGA GCGGATGGCTTAGCGATCAAGTCTACCGTCTTAACAAAACTAACAAAGCT ATGATTTCTTCGTGTGCTTTATAAATCAAACTCTACTCGTCTTGAACCTC CCCGACAGATGGCGTCAATGCGTATTTACACGCCGAGCTCGGTGTGTTGA GGGGGCACTTGGAAGGTATCGAGCGAAATATCGATTTCGCGGCCGCTTTG GCTGGGAAGTGTCTCTTGGTGTCTTCGAAGGACG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1140:178098..179881+

>mRNA_F-serratus_M_contig1140.1228.1 ID=mRNA_F-serratus_M_contig1140.1228.1|Name=mRNA_F-serratus_M_contig1140.1228.1|organism=Fucus serratus male|type=CDS|length=3084bp|location=Sequence derived from alignment at F-serratus_M_contig1140:178098..179881+ (Fucus serratus male)
GCTAGACAGAGTGCTCTAGATAACCAAAGTGATCAGGTGGTACGCGTTGT
GAACAGTCATAATGTGTTCCTGCTTGACTGCAAGAGCTCCAGGAAAAACG
AGATCAACCGTCTACGCTCGTTTATCGCGACAGTTGCCTACAGCAGAGAT
TATTCCTTTCCTTCCGTAGAGAGTCAGATACCCACGCCATGGATGTATGC
ATTCTTGACATTGGAAGCTATAAGACTCGGGGCCGACCTCCGTGGAGTGT
CCGGCGAAATGACTGCGGTACTCGACAGGCTTAGTAGGCGAGGGGATCCG
AAAACGTCAAAATGCTATGTTTTCTTCGATGACGCGTTGGTGCTTTTCAA
GGACCTATGGAAGGCGATGGGTATTGGATATACACCTGAAAGGGCTGGCG
AGGTGTTTTCCAATGCAATTGAGTTAAATGAGGCTCAAGGATGGATACTT
CTGACCAACAGAGACGGAAGCGTGGACGACAAGTGTGGTGGCCAGGTCAA
TCGAAGCCAGCTCGTCCTTCATGTGGACCCCGTTCGGTTTGCTGACGTTG
TACGGCGTATTGTCGACGTTCGATTGGTGGACTCAGCCAGTAAGCCGAAG
GTCAAGGAGGCACTTATTCGTTTTGTCAGAGAAACGAAAGGAGTTAGCCT
CGCTGAGCTTTCGCGTCAACAAGAACGATTCTACACGGCCGGAGAAGTCA
ATAAAAACTACCTCAGGTTCCTGTGGCTCCATCGCGAGTTGGAGTTAGGC
CAGGCGACCAAGCAAGCTCCCCCGATGGAGATGACGGAAAAGGACGTAGA
AGCGATGGTGGGCAGTTTAGTTGACCTACGGATGATGTTTCCTGTCCGGA
AAAGTTCTAGGGATTACTTGCCCGATTACTACGTTGTCGGCGCCTGTTTG
CCTGACCACTTAGGGTGCGAGATGACCCCAGAATCCCTTCTGGAGCTCAA
TTTTGGAAGTGCGATGTTTCGTTCGGAGCTGCAGATAGTCGGGACGAGAA
ACATGCCGCCGGGACTTATGCCAAGGTTGCTTGCATGGTGCGGACGCGGC
GAAGGGCGGATCACCGCGTGCTGGCGACATGGAGGATGTTTCACGTACAG
GGAACGCTTGGTACTGATTTACGAGTCGAGAATTTCCGAGAGACAATCAT
CGATTGTGTGCTGCGCCAAAGGGGACGCGAACACGGAGACAGCCGGAGGT
GTATTAGAGGACATCACCGAAGAGTTAGACCGTCTCATTCATGACCGACG
CTATGGGTTCCCAGGCATCGAGCTATGTAGAGAGGGTAAAATTGAAAAAA
TAAGAGTGGCCCAAGATAACGACCTGGAGAAGTTGCTGCAAAGACTCGGA
AAAGATCTAGAAGATCATATGAACCTAAGATTCGATGAACTGGAGAAGCG
ATCGGAGCGCATCGCGAGCTAGACAGAGTGCTCTAGATAACCAAAGTGAT
CAGGTGGTACGCGTTGTGAACAGTCATAATGTGTTCCTGCTTGACTGCAA
GAGCTCCAGGAAAAACGAGATCAACCGTCTACGCTCGTTTATCGCGACAG
TTGCCTACAGCAGAGATTATTCCTTTCCTTCCGTAGAGAGTCAGATACCC
ACGCCATGGATGTATGCATTCTTGACATTGGAAGCTATAAGACTCGGGGC
CGACCTCCGTGGAGTGTCCGGCGAAATGACTGCGGTACTCGACAGGCTTA
GTAGGCGAGGGGATCCGAAAACGTCAAAATGCTATGTTTTCTTCGATGAC
GCGTTGGTGCTTTTCAAGGACCTATGGAAGGCGATGGGTATTGGATATAC
ACCTGAAAGGGCTGGCGAGGTGTTTTCCAATGCAATTGAGTTAAATGAGG
CTCAAGGATGGATACTTCTGACCAACAGAGACGGAAGCGTGGACGACAAG
TGTGGTGGCCAGGTCAATCGAAGCCAGCTCGTCCTTCATGTGGACCCCGT
TCGGTTTGCTGACGTTGTACGGCGTATTGTCGACGTTCGATTGGTGGACT
CAGCCAGTAAGCCGAAGGTCAAGGAGGCACTTATTCGTTTTGTCAGAGAA
ACGAAAGGAGTTAGCCTCGCTGAGCTTTCGCGTCAACAAGAACGATTCTA
CACGGCCGGAGAAGTCAATAAAAACTACCTCAGGTTCCTGTGGCTCCATC
GCGAGTTGGAGTTAGGCCAGGCGACCAAGCAAGCTCCCCCGATGGAGATG
ACGGAAAAGGACGTAGAAGCGATGGTGGGCAGTTTAGTTGACCTACGGAT
GATGTTTCCTGTCCGGAAAAGTTCTAGGGATTACTTGCCCGATTACTACG
TTGTCGGCGCCTGTTTGCCTGACCACTTAGGGTGCGAGATGACCCCAGAA
TCCCTTCTGGAGCTCAATTTTGGAAGTGCGATGTTTCGTTCGGAGCTGCA
GATAGTCGGGACGAGAAACATGCCGCCGGGACTTATGCCAAGGTTGCTTG
CATGGTGCGGACGCGGCGAAGGGCGGATCACCGCGTGCTGGCGACATGGA
GGATGTTTCACGTACAGGGAACGCTTGGTACTGATTTACGAGTCGAGAAT
TTCCGAGAGACAATCATCGATTGTGTGCTGCGCCAAAGGGGACGCGAACA
CGGAGACAGCCGGAGGTGTATTAGAGGACATCACCGAAGAGTTAGACCGT
CTCATTCATGACCGACGCTATGGGTTCCCAGGCATCGAGCTATGTAGAGA
GGGTAAAATTGAAAAAATAAGAGTGGCCCAAGATAACGACCTGGAGAAGT
TGCTGCAAAGACTCGGAAAAGATCTAGAAGATCATATGAACCTAAGATTC
GATGAACTGGAGAAGCGATCGGAGCGCATCGCGAATGGCGTCAATGCGTA
TTTACACGCCGAGCTCGGTGTGTTGAGGGGGCACTTGGAAGGTATCGAGC
GAAATATCGATTTCGCGGCCGCTTTGGCTGGGAAGTGTCTCTTGGTGTCT
TCGAAGGACATGGCGTCAATGCGTATTTACACGCCGAGCTCGGTGTGTTG
AGGGGGCACTTGGAAGGTATCGAGCGAAATATCGATTTCGCGGCCGCTTT
GGCTGGGAAGTGTCTCTTGGTGTCTTCGAAGGAC
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