mRNA_F-serratus_M_contig1001.121.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.690e-64 Identity = 131/235 (55.74%), Postives = 155/235 (65.96%), Query Frame = 1 Query: 61 MSMLYIFVFVLLLSCPVARAFLASGWQEAASSQEV--ERSRHIPTSSTG--FVAPSGTAELKGRKARDFRR--ERAYRRAAQRPERRVQSP------GRDQKVAPLSALNPDTVYSAKEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYSTLPXXXXXXXXXXXXLNCRGDGRAVPRELDRKTGDA--VDLRLEEIGMGSVGQ 723 MS+ + +L+LS RAF+A G QE A+ +V R R TS T FV G A + D R E +R + R + P RD+ +APL A+N DT++SA EWIAGVAGGSVGVLGTLIQLELKQE L++RRNCPYC+GSGKLVCA+C SAGTFT+KLPG++TYSTLP LNCRGDGRAVPRELDRKT DA VDLRLEEIGMG +GQ Sbjct: 1 MSLFLVVSLLLILSPAACRAFVAFGRQEPAAHGDVGNNRGRRSRTSDTAAAFVVAGGAAAAGTTRCTDAARGAEPRGKRTCRTAPRSLPPPLGNGSSQRDRTIAPLRAINQDTLFSANEWIAGVAGGSVGVLGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTYSTLPCPGCAGNKYITCLNCRGDGRAVPRELDRKTADAAEVDLRLEEIGMGGIGQ 235
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: A0A835YP24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP24_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 9.570e-18 Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 388 AGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYSTLPXXXXXXXXXXXXLNCRGDGRAVPRELDRKTGDAVDLRLEEIGMG 711 AG+ GGSVGV+GTL+ +E K+ +R C YC GSG LVC C G T+ +L +NC+GDGR+VP L+RKT + LEEIGMG Sbjct: 19 AGILGGSVGVIGTLLGIEWKKYNVRQASECCYCRGSGHLVCGQCLGTGELTLVNAVTNKSISLGCPTCSGMTYITCINCKGDGRSVPNFLNRKTSRDPEDELEEIGMG 126
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: M1UXZ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UXZ1_CYAM1) HSP 1 Score: 73.9 bits (180), Expect = 1.540e-11 Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 1 Query: 376 KEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYS-TLPXXXXXXXXXXXXLNCRGDGRAVPRELDR 663 +E + AGGS+GVLGTL+ LEL Q R R CPYC+G GKLVC C + GT LP ++ T+P +C G GR E++R Sbjct: 85 QELASAFAGGSIGVLGTLLTLELAQTRARERMQCPYCSGRGKLVCGQCLALGT----LPNRKSPDGTVPCRLCGRSGYVPCNHCEGTGRLFQEEVER 177
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: A0A835YW14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW14_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.600e-11 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 298 RRVQSPGRDQKVAPLSALNPDTVYSAKEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKL--PGAETYSTLPXXXXXXXXXXXXLNCRGDGRAVPRELDRK 666 RR +S R ++ + L AL+P + + E ++G AGG+VGV+GTLI LELK++ + R CPYC G+G L CA C G + GA ++P XXXXXXXXX DG +VP L+ K Sbjct: 54 RRHESRLRRRRSSELRALDPAYIDAVNELMSGFAGGTVGVMGTLIGLELKKQNVVKRSVCPYCQGAGTLTCARCYGVGILLARRRSDGAAAPLSVPCGCXXXXXXXXXXXXXXDGASVPPLLEYK 178
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: R7QE93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE93_CHOCR) HSP 1 Score: 72.0 bits (175), Expect = 1.640e-10 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 379 EWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYSTLPXXXXXXXXXXXXLN-CRGDGRAVPRELDR 663 E A +AGG+VGV+GT+I LE++++ ++ R+ CPYC G+GKL CA C + G +P + S N C+GDGR +P +R Sbjct: 122 EITAAIAGGTVGVMGTIITLEVRRQQVKERKQCPYCRGNGKLPCATCYTVGA----VPCGDALSAQTGCAVCNERGFLECNHCQGDGRLIPWVYER 213
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR) HSP 1 Score: 70.1 bits (170), Expect = 2.790e-10 Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 379 EWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYSTLPXXXXXXXXXXXXLN-CRGDGRAVPRELDR 663 E A +AGG+VGV+GT+I LEL+++ ++ R+ CPYC G+GKL CA C + G +P + N C GDGR +P +R Sbjct: 68 EITAAIAGGTVGVMGTIITLELQRQRVKHRKQCPYCRGTGKLPCASCYTIGA----VPSRTALTAQEVCTCCNERGFLQCNHCDGDGRLIPLAYER 159
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: A0A7R9U8V3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8V3_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 9.630e-10 Identity = 53/126 (42.06%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 337 PLSALNPDTVYSAKEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYSTL--PXXXXXXXXXXXXLNCRGDGRAVPRELDRKTGDAVDLRLEEIGM 708 P L V +A + AGG+VGV+G+L+ +E+++ R R CPYC G+G+L CA+C AG +++ GA+ T+ XXXXXXXXXXXX R VP LDR+ + LEEIG+ Sbjct: 32 PTMTLEGLVVNTAGDVACAFAGGTVGVMGSLVAIEIRKLQQRKRNACPYCVGTGRLTCAVCWGAGK--VEIAGAQGSQTVVVDXXXXXXXXXXXXXXXXXXXRLVPLMLDRRASRDPEDELEEIGL 155
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: A0A7R9UFV6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFV6_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.930e-7 Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 373 AKEW---IAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAETYSTLPXXXXXXXXXXXXLNCRG-----------DGRAVPRELDRKTGDAVDLRLEEI 702 +K W IAG+ GGS+GV+GTL+ E ++ + R CPYC GSG L CA+C A + ++ PGAE NC G +G ++P +L R+T D LEE+ Sbjct: 66 SKTWQGDIAGLLGGSIGVIGTLVYYEKRRFKMLERVLCPYCQGSGFLTCAVCHGAESLQVR-PGAE--GAQDGSGGAAEDEILCPNCDGAGAVXXXXXXXEGLSMPGQLLRQTLDIEMDDLEEL 186
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: A0A7S1TK16_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK16_9RHOD) HSP 1 Score: 57.8 bits (138), Expect = 2.230e-6 Identity = 37/113 (32.74%), Postives = 51/113 (45.13%), Query Frame = 1 Query: 388 AGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAE------TYSTLPXXXXXXXXXXXX----------LNCRGDGRAVPRELDRK-TGD 675 A AGG+VGV+G+LI EL+Q + + CPYC G+G+L C C G + GA+ T S P +C GDGR +P ++ TGD Sbjct: 28 AAFAGGTVGVMGSLIAWELRQLRDKESKQCPYCLGTGRLRCGRCLGQGELLISEVGAQAKALPKTESPQPLQQQLDGFVKCSQCEGAASVECCHCGGDGRIIPETIEHAATGD 140
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: M2Y0D2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0D2_GALSU) HSP 1 Score: 57.4 bits (137), Expect = 4.230e-6 Identity = 35/104 (33.65%), Postives = 49/104 (47.12%), Query Frame = 1 Query: 355 PDTVYSAKEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAET-YSTLPXXXXXXXXXXXXLNCRGDGRAVPRELDR 663 P TV E + +AGG+VGV+GTL+ LE+ ++ + R CPYC G KL C +C G +P Y +C G GR +P E +R Sbjct: 47 PPTV---NEVTSALAGGTVGVMGTLLVLEVIRQRIEEMRQCPYCRGLRKLPCGLCYGMGF----IPDVSCLYCKSDCENCGGEGSVLCCHCDGSGRYLPVEYER 143 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.121.1 >prot_F-serratus_M_contig1001.121.1 ID=prot_F-serratus_M_contig1001.121.1|Name=mRNA_F-serratus_M_contig1001.121.1|organism=Fucus serratus male|type=polypeptide|length=226bp MDTTMSMLYIFVFVLLLSCPVARAFLASGWQEAASSQEVERSRHIPTSSTback to top mRNA from alignment at F-serratus_M_contig1001:26391..32621+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1001.121.1 ID=mRNA_F-serratus_M_contig1001.121.1|Name=mRNA_F-serratus_M_contig1001.121.1|organism=Fucus serratus male|type=mRNA|length=6231bp|location=Sequence derived from alignment at F-serratus_M_contig1001:26391..32621+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1001:26391..32621+ >mRNA_F-serratus_M_contig1001.121.1 ID=mRNA_F-serratus_M_contig1001.121.1|Name=mRNA_F-serratus_M_contig1001.121.1|organism=Fucus serratus male|type=CDS|length=1356bp|location=Sequence derived from alignment at F-serratus_M_contig1001:26391..32621+ (Fucus serratus male)back to top |