prot_F-serratus_M_contig114.1211.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig114.1211.1
Unique Nameprot_F-serratus_M_contig114.1211.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length237
Homology
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BLAST of mRNA_F-serratus_M_contig114.1211.1 vs. uniprot
Match: D7FPD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD0_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 5.120e-40
Identity = 79/178 (44.38%), Postives = 112/178 (62.92%), Query Frame = 0 
Query:   48 RRTFWATAGLGWVVWVLSVSSAADQKW--MTSGSFGLGIKDVTKACDSPFANESACEAYDAFVATQTLATVMCSVAVAIYTIAFFRPFEAKIGSTKVLGLMGGVLMAFASFFQMLAFIFAAKRVQKNNEDLGESLF-ENGPTYDVGVTTFVFGSVQAILILLTFKATGDGPLLPILRR 222
            R+ +W   G GWVVWVL+  +A D+ W  + +G  G G+     ACD    N+S C A+  F A Q  ATVMCSVAV ++T++FFRP +A+ GS+K LGL+GGV MA  +F QM++ +F  K +Q+ N   G++   + G TY +G+T FVFG +Q I++L  F    +GPLL   RR
Sbjct:   23 RKVYWFGCGFGWVVWVLTTPAAGDENWGELPAGD-GYGVA-TGFACDEGDVNDSFCTAHRNFAAAQKAATVMCSVAVLLFTVSFFRPSQARYGSSKGLGLVGGVFMALFTFCQMVSILFLVKSIQEYNRYGGDAFMAKTGDTYGLGITAFVFGLIQVIIVLGFFGQAANGPLLSCTRR 198
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BLAST of mRNA_F-serratus_M_contig114.1211.1 vs. uniprot
Match: A0A6H5KLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK4_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 5.870e-26
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0 
Query:  107 FVATQTLATVMCSVAVAIYTIAFFRPFEAKIGSTKVLGLMGGVLMAFASFFQMLAFIFAAKRVQKNNEDLGESLFE--NGPTYDVGVTTFVFGSVQAILILLTFKATGDGPLLPILRRRAA 225
            F A Q  ATVMCSVAV ++T++FFRP  A+ GS+K  GL+GGV MA  +FFQM++ +F  K +Q+ N   G   FE   G TY +G+T FVFG +Q I++L  F    +GPLL   RR +A
Sbjct:    9 FAAAQKAATVMCSVAVLLFTVSFFRPSHARHGSSKGFGLVGGVFMALFTFFQMVSILFLVKSIQEYNR-YGGGAFEAKTGDTYGLGMTAFVFGLIQVIIVLGFFGQAANGPLLSCTRRISA 128
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig114.1211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPD0_ECTSI5.120e-4044.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLK4_9PHAE5.870e-2648.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..208
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..236
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 51..70
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig114contigF-serratus_M_contig114:45862..76156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig114.1211.1mRNA_F-serratus_M_contig114.1211.1Fucus serratus malemRNAF-serratus_M_contig114 45823..76269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig114.1211.1 ID=prot_F-serratus_M_contig114.1211.1|Name=mRNA_F-serratus_M_contig114.1211.1|organism=Fucus serratus male|type=polypeptide|length=237bp
MAIGPSIFPLPSAQARKDGSEFFGNDHDDSRHASWTTTWEGGYSSKWRRT
FWATAGLGWVVWVLSVSSAADQKWMTSGSFGLGIKDVTKACDSPFANESA
CEAYDAFVATQTLATVMCSVAVAIYTIAFFRPFEAKIGSTKVLGLMGGVL
MAFASFFQMLAFIFAAKRVQKNNEDLGESLFENGPTYDVGVTTFVFGSVQ
AILILLTFKATGDGPLLPILRRRAARKKSRVPIHPS*
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