mRNA_F-serratus_M_contig1001.120.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: D8LRQ6_ECTSI (Methyltransferase type 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ6_ECTSI) HSP 1 Score: 491 bits (1265), Expect = 1.990e-165 Identity = 238/283 (84.10%), Postives = 257/283 (90.81%), Query Frame = 3 Query: 1032 MQDCVDLMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKP 1880 MQ+CVD +TEKSK GNEMV+ LVQSLGSALVYPDAGNF+TNRKLWDNYAAEWEP+ASWVQKMA GSK++RLEVVGDEWS+R++V+RVI DFILPNVT ESNVGEIGCGGGRVT EVFR+ GQLTCFDISKNMLKRTRDAVG+ CAGGGKV +VLLS+PRLPE S SLDF+ILYDVLVHVDLHITNKY+REIARVLKPGGKAFLSTANFLSP GGWDRF AQDKYSVGGFYFMCPDMVRLML+KAGLRVVREG HDPSNSYYNRDYLVLV+KP Sbjct: 1 MQECVDTLTEKSKAGNEMVSNLVQSLGSALVYPDAGNFDTNRKLWDNYAAEWEPDASWVQKMAQGSKTERLEVVGDEWSTRDDVMRVINDFILPNVTEESNVGEIGCGGGRVTVEVFRKAGQLTCFDISKNMLKRTRDAVGEGVCAGGGKVIFVLLSQPRLPENASDSLDFVILYDVLVHVDLHITNKYIREIARVLKPGGKAFLSTANFLSP----------GGWDRFNAQDKYSVGGFYFMCPDMVRLMLDKAGLRVVREGDHDPSNSYYNRDYLVLVQKP 273
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S2SUS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUS9_9STRA) HSP 1 Score: 275 bits (704), Expect = 9.840e-82 Identity = 137/295 (46.44%), Postives = 190/295 (64.41%), Query Frame = 3 Query: 1014 AVRVQAMQDCVDLMTEKSKQ-GNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG---GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKPEA 1886 A+ + ++D + + K+ Q G+ MV L++SL A+VYPDAGNF+TNRKLWD YA EW+P W+Q+M+ S + +VGDEW+ + RV+ DFIL V + V E+G GGGRV V VG L C DIS MLKR RD + + ++ L++PR P+ L + F+ ++DV VHVDLH+ ++Y+ EI ++L PGGKAF+STAN ++ GGW+RF Q KY+VGGFYF+CPDMV +++K GLR++R DPSN YY+RDYLVLV+KP A Sbjct: 2 ALLMSTLEDVEERLRGKAAQEGSPMVLELLKSLNQAVVYPDAGNFDTNRKLWDLYAGEWDPAQPWLQQMSRDVQASLEQDIHIVGDEWAPPTHLDRVVQDFILTEVDSSCQVLEVGSGGGRVAARVAPHVGHLKCADISMEMLKRCRDTL-----QAHTNISFLHLTQPRFPDHLHGTFHFVYVFDVFVHVDLHLIHQYLSEIYKLLVPGGKAFISTANLMTS----------GGWERFARQSKYTVGGFYFLCPDMVNRLIDKNGLRILRHADEDPSNVYYSRDYLVLVQKPTA 281
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A835Z8T5_9STRA (Methyltransferase type 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T5_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.700e-73 Identity = 138/318 (43.40%), Postives = 191/318 (60.06%), Query Frame = 3 Query: 1032 MQDCVDLMTEKSK-QGNEMVAGLVQSLGSALVY-PDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSD--------------------------------RLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPS--NSYYNRDYLVLVEK 1877 M+ + + E+++ + M+A L++SLG A+VY PDAGN +TNRKLWD YA+EW +ASWVQ MA GS+ VG+EWS+ +E+++V+ +FILP + +S E+GCGGGRV +V+ V L C+DIS ML R A+ K AG LL+ P LP + S DF+ +DVLVHVDLH++ +Y+RE+ R L G+AFLS A+ S RL GW+RF Q K++VGGFYFMCP+MVR ++ KAGLR+VREG + + N YYNRD+L++VEK Sbjct: 1 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAAL---KAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCS---RL-------GWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 305
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A7S2UUH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH0_9STRA) HSP 1 Score: 239 bits (610), Expect = 6.870e-69 Identity = 128/282 (45.39%), Postives = 167/282 (59.22%), Query Frame = 3 Query: 1083 MVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--------GSKS---DRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPS-NSYYNRDYLVLVEKPEAIS 1892 M L+ SLGSALVYPD GNF TN+KLW+ YA EW P+ WV+ +A GS S D L+ VG EWS ++ ++ F+ + + V EIGCGGGR+ +V V ++ C+DISK M+ + A+ V + +L +P + DFI +DV+VH+DLH+ NKY EI R LK GKAF+STAN S GGW RF Q KY+VGGFYF+CP+MVR +L K GLR V+EG + S N Y NRDYLVLVEK + +S Sbjct: 1 MAMSLINSLGSALVYPDQGNFVTNKKLWNLYAQEWSPSEDWVKDIARPNNSSQDIGSSSNEVDELKFVGQEWSPDTDLEEILQQFVYDYIDEDKLVAEIGCGGGRLAAKVAPRVKKMDCYDISKEMISQAEKALSFL-----SNVDFHILEEPSFSKNCEKLYDFIYCFDVMVHMDLHLINKYFGEIGRALKDDGKAFISTANITST----------GGWARFSKQRKYTVGGFYFLCPEMVRFLLHKNGLRPVKEGPIEESTNVYLNRDYLVLVEKSDEVS 267
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: W7TSG7_9STRA (Deacetylase sulfotransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSG7_9STRA) HSP 1 Score: 226 bits (575), Expect = 2.500e-62 Identity = 138/325 (42.46%), Postives = 178/325 (54.77%), Query Frame = 3 Query: 1068 KQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNAS-----------------------WVQKMAGG----SKSD-----RLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL---SKPRLPEE-------LSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVR-----EGQHDPS--------NSYYNRDYLVLVEK 1877 ++G +V ++ SL A+VY D GN ETNR+LW+ YA EW N + WVQ+MA SKS L ++G EWSS E++ V+ DFILP +T ES V E+G GGGRV V + +LTC DIS+ ML+ R A+ AG ++++L+ S P LP + L DF+ +DVLVHVD+H +REI R+LK GKAFLSTAN LSP GW RF AQDKY+VGGFYF+ P++V ML K G RVV+ EG + S N YY RDYLV+VEK Sbjct: 63 REGTSIVRSVINSLSGAMVYTDVGNVETNRRLWNRYAEEWHGNCARNGPYSGSARSPSSELPANKPNVWVQQMAANTAKTSKSTPYSLPALALIGQEWSSPEDLEEVVRDFILPYLTPESAVVEVGVGGGRVAALVLGKCMRLTCLDISERMLEAARTALAAHPAAGATVLEFILVGNDSNPSLPSQRVEYPVSLHGRCDFVYCFDVLVHVDVHTLYHTLREIRRLLKASGKAFLSTANILSP----------AGWRRFAAQDKYTVGGFYFVSPEIVHGMLAKVGFRVVQHSEIPEGFKELSDTHGLAKGNLYYGRDYLVVVEK 377
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A6A7GCB0_9CRUS (Methyltransferase type 12 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCB0_9CRUS) HSP 1 Score: 215 bits (547), Expect = 1.240e-59 Identity = 118/293 (40.27%), Postives = 167/293 (57.00%), Query Frame = 3 Query: 1050 LMTEKSKQ-GNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGS-----------KSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL-----SKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEK 1877 L++ +SK G + L+++LG+++VY ++ N N+KLWD YA +W PN WVQ+MA GS K +E +GDEWS R+ L V+ FI+ N+ +V EIG GGGRV + V V L CFD+S MLK + + V++ LL S P P +L+S+ DF+ L+DVLVHVD+H Y ++I ++LKP GKA + TAN +P GW RF Q K+SV GFYF+ PD+V L+L K+G ++ D N Y +RDY V+V K Sbjct: 15 LISSQSKHDGTSQIRNLLKNLGASVVYEES-NVVANKKLWDIYAKDWSPNKDWVQRMAHGSTESSSTPNIDGKKRGIECLGDEWSDRKSFLEVVDRFIVSNIKKSDSVLEIGSGGGRVASLVCPLVSSLHCFDVSSEMLKCAQKTLSKF-----NNVRFTLLESSTDSPPTFPIKLTSTFDFVYLFDVLVHVDIHTQFNYFQQIFQLLKPDGKALIHTANLCAP----------NGWKRFEKQKKFSVAGFYFVTPDLVDLLLAKSGFEIIERSSIDERNVYLSRDYFVVVRK 291
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: F0XX81_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX81_AURAN) HSP 1 Score: 214 bits (546), Expect = 1.390e-59 Identity = 120/288 (41.67%), Postives = 165/288 (57.29%), Query Frame = 3 Query: 1071 QGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDR--LEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLL------------SKPRL-PEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVRE-GQHDPSNSYYNRDYLVLVEKPEA 1886 +G EMV +VQSL SAL+YP+AGN TN KLWD YA+EW A WV +MA ++ L+ VGDEW+ R RV+ ++IL VT E+ EIG GGGR+ V V L C D+S ML R A+ G + L+ + PR P ++ DF+ +DV+VH+D H + +R + +L GG+AF+STAN +P G+ RF Q KYSVGGF+F+ P+ VR++ +KAGL VVRE D SN+YYNRDYL ++ + +A Sbjct: 15 KGQEMVQQMVQSLSSALIYPEAGNVATNEKLWDVYASEWGKEAPWVVEMAATNRDGAVALDAVGDEWAPRAHTERVVDEWILSEVTPEARCCEIGSGGGRIAALVAPRVASLACCDVSAKMLARAEAALA----GGPAATSFHLVHGDAAPSDAGFGAGPRAYPPTMARGFDFVYCFDVMVHLDAHAMYRCLRRVESLLADGGRAFVSTANLKAP----------DGFARFEKQSKYSVGGFFFVTPETVRVLADKAGLAVVRELDAPDASNTYYNRDYLAILARKDA 288
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A6G0WRC8_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRC8_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.550e-59 Identity = 114/276 (41.30%), Postives = 165/276 (59.78%), Query Frame = 3 Query: 1065 SKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN--VGEIGCGGGRVTTEVFRE--VGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKP 1880 SK N+++ G++ SL SA+V PD GN E NR++WD YA +W P A +VQ M+ S L V+GDEWS+ E++ V+ ++ P + + VGEIG GGGRV+ V R+ V + C DIS ML + + D V +V ++SLDF+I++DV+VH+DLH ++ +++I R+LKPGG FLSTAN L+P GW+RF Q K+S+GGFYF+CP MV ++ + G + Q N Y NRDYLV+++KP Sbjct: 3 SKARNDLILGVISSLSSAMVAPDIGNVEGNRRVWDAYAKDWSPTADFVQSMSP-QFSHPLAVLGDEWSTPEDLHAVLDAYVYPYLAAGESLHVGEIGSGGGRVSRIVARQPTVSKYVCMDISAEMLAHAKKTLED--------VPHVEFKHLPRAWPAATSLDFVIVFDVMVHMDLHTIHQTLQQIHRLLKPGGHCFLSTANLLAP----------KGWERFEKQSKFSIGGFYFLCPQMVDFLVVQNGFTIALRSQPRGDNMYENRDYLVVIQKP 259
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A8J2SCW4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCW4_9STRA) HSP 1 Score: 220 bits (560), Expect = 4.400e-59 Identity = 124/294 (42.18%), Postives = 171/294 (58.16%), Query Frame = 3 Query: 1038 DCVDLMTEKSKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKS--DRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFREVGQLTCFDISKNMLKRTRDAV------------GDEKCAGGGKVKYVLLSKPR-LPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVRE-GQHDPSNSYYNRDYLVLV 1871 D + + E + +G+EMV +VQ L AL+YPDAGN +TN KLWD YA+EW A WV MA ++ + LE VGDEW+ RV+ ++IL V+ +++ EIG GGGR+ V V +L CFD+S ML + A+ GD A G KPR + + DF+ +DV+VH+D H + ++ I +LK GKAF+ST+N L+P G+ RF AQ+KYSVGGFYF+ P+ VR ++ +AGLRVVRE D SN+YYNRDYL L+ Sbjct: 4 DTEEYLREAAGRGHEMVQQMVQKLSGALIYPDAGNVQTNEKLWDVYASEWGAEAGWVAGMAASNREAKETLENVGDEWAPAAHTKRVVDEWILSEVSLKTHCCEIGSGGGRIGRMVAPRVSKLQCFDVSAKMLAAAKQALASQENVTFAQIHGDASGADAG-----FSDKPRHYAPQHKHAYDFVYCFDVMVHMDAHAMFRCLKRIRALLKDEGKAFISTSNLLAP----------DGFRRFEAQEKYSVGGFYFVTPETVRCLVSRAGLRVVRELSAPDASNTYYNRDYLALL 282
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Match: A0A485L136_9STRA (Aste57867_14601 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L136_9STRA) HSP 1 Score: 210 bits (535), Expect = 3.130e-58 Identity = 111/278 (39.93%), Postives = 166/278 (59.71%), Query Frame = 3 Query: 1065 SKQGNEMVAGLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVT--TESNVGEIGCGGGRVTTEVFRE--VGQLTCFDISKNMLKRTRDAVGDEKCAGGGKVKYVLLSKPRLPEELSSSLDFIILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGKRLMVGRAHGGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQHDPSNSYYNRDYLVLVEKPEA 1886 +K +++ ++ SL SA+V PD GN E NR++WD YA +W P A +V M+ S L+V+GDEWS+ ++ V+ F+ P ++ T+ +VGEIG GGGRV V V + C DIS ML+ R + A + Y LL P+ + +SSLDF+I++DV+VH+DLH + ++++ R+L+PGG F STAN +P GW RF Q K+S+GGFYF CP ++ +L + G +V+ G P+N Y NRDYL++V+KP Sbjct: 2 AKARKDLILDVISSLSSAMVAPDIGNIEGNRRVWDAYAKDWSPTADFVTSMSP-QFSHPLDVLGDEWSTPADLTHVLSTFVFPYLSQSTQVHVGEIGSGGGRVARLVASHPAVSRYVCMDISSEMLEHARKTL-----ASVPHIDYCLL--PQTSPD-ASSLDFVIVFDVMVHMDLHTIYQTLQQVFRLLRPGGHCFFSTANLTAP----------DGWARFQKQAKFSIGGFYFTCPQLIDFVLAQCGFEIVQRGAPSPTNMYLNRDYLLVVQKPHV 260 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.120.1 >prot_F-serratus_M_contig1001.120.1 ID=prot_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=polypeptide|length=325bp MSEGGDSVANGAKAKAVVPCDALEGGGTAEEAVRVQAMQDCVDLMTEKSKback to top mRNA from alignment at F-serratus_M_contig1001:15985..21484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=mRNA|length=5500bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1001:15985..21484+ >mRNA_F-serratus_M_contig1001.120.1 ID=mRNA_F-serratus_M_contig1001.120.1|Name=mRNA_F-serratus_M_contig1001.120.1|organism=Fucus serratus male|type=CDS|length=1950bp|location=Sequence derived from alignment at F-serratus_M_contig1001:15985..21484+ (Fucus serratus male)back to top |