prot_F-serratus_M_contig1138.1203.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1138.1203.1
Unique Nameprot_F-serratus_M_contig1138.1203.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length257
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1138.1203.1 vs. uniprot
Match: A0A5J9UC52_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UC52_9POAL)

HSP 1 Score: 60.8 bits (146), Expect = 3.550e-7
Identity = 38/90 (42.22%), Postives = 47/90 (52.22%), Query Frame = 0 
Query:   86 IMSISAMWDYRDESHEELRLQDYMANTRGCSAKGRNDPDWQET------ETGAF-------GFVYPFLMSISAMAAYQSKSHEELRLEDY 162
              SISAM  Y ++SHEELR +DY    +G   KG     +++T      E G+        G    +  SISAM  Y SKSHEELR EDY
Sbjct:   70 FQSISAMTVYSNKSHEELRHEDYQIQNKGLPGKGSRVSPYKKTADDPCNEAGSSASKKKEAGSPNWYFQSISAMPVYSSKSHEELRYEDY 159
[Close]
BLAST of mRNA_F-serratus_M_contig1138.1203.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 4.530e-5
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:    2 SLSAMEEYEGKSHEECRLEDYAQNRKNNLVV-GGGSLDGATPKS 44
            S+SAM+EYEGKSHEE R+EDY  NRKN+L V  G +  GA P S
Sbjct:  241 SISAMKEYEGKSHEELRVEDYLLNRKNSLAVTAGATAAGAAPSS 284
[Close]
BLAST of mRNA_F-serratus_M_contig1138.1203.1 vs. uniprot
Match: A0A811NPH9_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811NPH9_9POAL)

HSP 1 Score: 54.7 bits (130), Expect = 7.360e-5
Identity = 37/104 (35.58%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:   62 GTENPAWQATPTRDGIGSSVS-MSKIMSISAMWDYRDESHEELRLQDYMANTRGCSA--KGRNDPDWQETETGAFGFVYPFLMSISAMAAYQSKSHEELRLEDY 162
            GT    +  TP  D   S     +K+ SISAM +Y+D+SH+ELR +DY  +  G +        PD     +G         +S+     Y+ KSHEELR EDY
Sbjct:  305 GTRIKPYAQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHDELRWEDYQRDQAGGTRIKPYAQTPDVDSATSGTQPAAKLDSISVMPEYKYKDKSHEELRWEDY 408
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1138.1203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5J9UC52_9POAL3.550e-742.22Uncharacterized protein (Fragment) n=1 Tax=Eragros... [more]
A0A6H5K9B1_9PHAE4.530e-563.64Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
A0A811NPH9_9POAL7.360e-535.58Hypothetical protein n=2 Tax=Miscanthus lutariorip... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2360coord: 214..256
e-value: 2.1E-11
score: 45.6
coord: 1..27
e-value: 2.6E-9
score: 38.9
coord: 65..113
e-value: 8.5E-9
score: 37.2
coord: 136..167
e-value: 8.9E-10
score: 40.4
IPR037665Nucleoporin peptidase S59-likePANTHERPTHR23198NUCLEOPORINcoord: 1..30
IPR037665Nucleoporin peptidase S59-likePANTHERPTHR23198NUCLEOPORINcoord: 177..256
IPR037665Nucleoporin peptidase S59-likePANTHERPTHR23198NUCLEOPORINcoord: 55..134
coord: 132..177
IPR037637Nuclear pore complex protein NUP98-NUP96PANTHERPTHR23198:SF6NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96coord: 132..177
IPR037637Nuclear pore complex protein NUP98-NUP96PANTHERPTHR23198:SF6NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96coord: 55..134
IPR037637Nuclear pore complex protein NUP98-NUP96PANTHERPTHR23198:SF6NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96coord: 177..256
coord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1138contigF-serratus_M_contig1138:275825..278897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1138.1203.1mRNA_F-serratus_M_contig1138.1203.1Fucus serratus malemRNAF-serratus_M_contig1138 275635..279671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1138.1203.1 ID=prot_F-serratus_M_contig1138.1203.1|Name=mRNA_F-serratus_M_contig1138.1203.1|organism=Fucus serratus male|type=polypeptide|length=257bp
MSLSAMEEYEGKSHEECRLEDYAQNRKNNLVVGGGSLDGATPKSLPVVVD
GFVFAVPSKRRGTENPAWQATPTRDGIGSSVSMSKIMSISAMWDYRDESH
EELRLQDYMANTRGCSAKGRNDPDWQETETGAFGFVYPFLMSISAMAAYQ
SKSHEELRLEDYLKSREECSTDAPSQGSSSSVPEALTTTTPAAKSSLKSA
VPPQQKGTEDPAWQPVLMEVKPTISVEVLMSISAMQEYANKSHEELRLEY
YLQNRK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037665Nucleoporin_S59-like
IPR037637NUP98-NUP96