mRNA_F-serratus_M_contig1138.1201.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI) HSP 1 Score: 290 bits (743), Expect = 3.450e-94 Identity = 149/179 (83.24%), Postives = 158/179 (88.27%), Query Frame = 3
Query: 630 GGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSG---KAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMV 1157
GG+LAGGLHA+SGPDHLAALLPRIMG+KWH SMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHN+RLV++MG+WTEGLVGVSLIAIGLLGLKESLLD+EE PAFEAKSAGSA VEG +AIF NGVLHGFSWDGAPSLAPALALSSW SVLWFLLAYCSGTMV
Sbjct: 8 GGVLAGGLHAVSGPDHLAALLPRIMGQKWHKSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMV 186
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.060e-66 Identity = 123/184 (66.85%), Postives = 136/184 (73.91%), Query Frame = 3
Query: 624 VGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRL--GLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEE-----APAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTM 1154
+GGG+LAGGLHAISGPDHLAALLPRIMGK W +MRIGA WGLGHGFSAT+IGLAAFF KDR+ G G R +S +GT+TE LVGVSLI IGL+GLKESLLD A A E S A GGG +AIFLNG+LHGFSWDGAPSLAPALA ++W VLWFLLAYC GTM
Sbjct: 1 MGGGVLAGGLHAISGPDHLAALLPRIMGKAWPVAMRIGAVWGLGHGFSATLIGLAAFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDKPHEDDAAAAASEISGEKSPAKRGGGQ----------RAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTM 174
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA) HSP 1 Score: 193 bits (490), Expect = 3.990e-56 Identity = 100/182 (54.95%), Postives = 129/182 (70.88%), Query Frame = 3
Query: 612 AFSTVGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMV 1157
AFST+ GG+LAG LHA++GPDHLAALLPR +GK+W+ +MRIGA WGLGHG SA ++G+ AFF K RL + L+ + +TE L+GVSLI IGLLGLKE+ F+ + ++ GS + G A K +GKA+FLNG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM+
Sbjct: 9 AFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHNTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGS--IAGSAASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTML 187
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.770e-55 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 3
Query: 612 AFSTVGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMV 1157
AFST+ GG+LAG LHA++GPDHLAALLPR +GK+W+ +MRIGA WGLGHG SA ++G+ AFF K RL + L+ + +TE L+GVSLI IGLLGLKE+ F+ + ++ GS + G GA K +GKA+FLNG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM+
Sbjct: 133 AFSTISGGMLAGSLHAVTGPDHLAALLPRCIGKRWYQAMRIGAVWGLGHGISAIIMGMVAFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGS--ITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTML 311
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA) HSP 1 Score: 180 bits (456), Expect = 3.540e-50 Identity = 101/195 (51.79%), Postives = 132/195 (67.69%), Query Frame = 3
Query: 576 RKLSFVGLANTAAFSTVGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESL-LDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMV 1157
R L+ V +A+ A+ ++VGGG+L+G LHAISGPDHLAA++PR +GK+W SM++GA WGLGHG S ++GL AF KD+L L + ++S + TWTE LVG+SLI IG LG+KES D ++A A E S G S K+IF NG+LHG SWDG PSLAPALA ++W V+ FL AYC G +V
Sbjct: 77 RPLATVAMASAASLASVGGGVLSGSLHAISGPDHLAAVVPRCIGKRWWISMQVGALWGLGHGVSGLMMGLFAFLVKDKLNL-NKSPMISNLSTWTEILVGLSLILIGFLGVKESRSFDSDKAAAKEKLEQESGKKTG-----------SFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVV 259
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A0G4EAE2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAE2_VITBC) HSP 1 Score: 166 bits (421), Expect = 1.210e-43 Identity = 96/190 (50.53%), Postives = 122/190 (64.21%), Query Frame = 3
Query: 609 AAFSTVGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRL------GLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLL-DFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMV 1157
A+ TVGGG LAG LHA+SGPDHLAALLP+ +G++W + ++G WGLGHG SA ++G+ AF KDR+ GL H L+ M TWTEGLVG+SLI IG G KE+ D EE A A EG L + G +F NG+LHGFS DGAP LAP+L+ + W +V FLL+YC+GTM+
Sbjct: 208 ASIVTVGGGALAGSLHAVSGPDHLAALLPQCLGRRWTGAGKLGLVWGLGHGLSAMIMGMLAFVLKDRIFVMDAAGL-HGGALIERMETWTEGLVGLSLILIGFFGYKEARSWDAEELQAQLDARAKEEQKEG--YRDLSASLRRGLTLFFNGMLHGFSLDGAPGLAPSLSFTRWPAVFLFLLSYCTGTML 394
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A7S0BZI7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZI7_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.380e-43 Identity = 89/175 (50.86%), Postives = 120/175 (68.57%), Query Frame = 3
Query: 630 GGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTM 1154
GGL AGGLHAI+GPDH+AALLPR GK+W+ + RIGA WGLGHG SAT++G+ AFFFK+R G +++ + E VG+SL+ IG +GLKE++ E+ +S SAA + G T S +++ LNG++HG SWDGAPSLAPA+AL++W L FLL+Y GT+
Sbjct: 112 GGLFAGGLHAIAGPDHIAALLPRCSGKRWYLAGRIGALWGLGHGISATLLGVIAFFFKNRFS-GSMSGILTGASSVMEIAVGLSLVVIGAMGLKEAIEWKEQLQDVPPQSLSSAANDSVGVETK-----SNRSVILNGLIHGLSWDGAPSLAPAIALATWRGSLTFLLSYAMGTI 280
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A7R9ZBQ6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBQ6_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.410e-43 Identity = 91/178 (51.12%), Postives = 121/178 (67.98%), Query Frame = 3
Query: 624 VGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLG-LGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTM 1154
V GG+ AGGLHAI+GPDHLAALLPR G++W+ + RIGA WG+GHG SAT++G+ AF K R+ +G R+V ++ E VG SL+ IGLLG+KE+ E +S +AA E G ++V + +A+ NGVLHGFSWDGAPSLAPA+A+++W + FLLAY GTM
Sbjct: 88 VSGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKSRMSKMGAFSRVVRGASSFMEIAVGASLVFIGLLGIKEAREWEAEIEGGVPQSLSAAAGEDG----MKVAQK--RAVVFNGVLHGFSWDGAPSLAPAIAVATWRGNITFLLAYALGTM 259
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: B7G7I3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7I3_PHATC) HSP 1 Score: 161 bits (407), Expect = 6.020e-43 Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 3
Query: 522 PATAMRLGTGLSMPAGAARKLSFVGLANTAAFSTVGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLGLGHNERLVSVMGTWT---EGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTM 1154
P MR T L+M A A G+A A + GGL AGGLHAI+GPDHLAALLPR G++W+ + R+GA WG+GHG SAT+IG+AAF K+ RL +++ T E VG+SLI IG++G++E+ +E + +S SAA + G + +A+ NG+LHGFSWDGAPSLAPALA+++W+ L FL +Y GTM
Sbjct: 58 PTPQMRTTTSLAMVAPA-------GVAVAAITGAMTGGLFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRVGALWGMGHGVSATIIGVAAFGLKNTFKNSMGSRLQTLVAGATHVTEIAVGLSLILIGMMGIREAREWEDELDGVQPQSLSSAAADAG------IKTAQKRAVVFNGLLHGFSWDGAPSLAPALAVATWSGNLAFLFSYAVGTM 258
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Match: A0A7S4J5D2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5D2_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.120e-42 Identity = 89/178 (50.00%), Postives = 117/178 (65.73%), Query Frame = 3
Query: 624 VGGGLLAGGLHAISGPDHLAALLPRIMGKKWHSSMRIGATWGLGHGFSATVIGLAAFFFKDRLG-LGHNERLVSVMGTWTEGLVGVSLIAIGLLGLKESLLDFEEAPAFEAKSAGSAAVEGGGAGTLRVTKGSGKAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTM 1154
+ GG+ AGGLHAI+GPDHLAALLPR G++W+ + RIGA WG+GHG SAT++G+ AF K+R+ +G +V + E VG SL+ IGLLG+KE+ E +S +AA E G V +A+ NGVLHGFSWDGAPSLAPA+A+++W + FLLAY GTM
Sbjct: 85 ISGGVFAGGLHAIAGPDHLAALLPRCCGQRWYRAGRIGALWGMGHGVSATILGVCAFALKNRMSKMGAFSNIVHGASAFMEVAVGASLVFIGLLGIKEAREWEAEIEGGSPQSLSAAAGEDG------VKVAQKRAVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTM 256 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1138.1201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1138.1201.1 >prot_F-serratus_M_contig1138.1201.1 ID=prot_F-serratus_M_contig1138.1201.1|Name=mRNA_F-serratus_M_contig1138.1201.1|organism=Fucus serratus male|type=polypeptide|length=226bp MPRGGSGGSDLGGNPATAMRLGTGLSMPAGAARKLSFVGLANTAAFSTVGback to top mRNA from alignment at F-serratus_M_contig1138:235774..239548+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1138.1201.1 ID=mRNA_F-serratus_M_contig1138.1201.1|Name=mRNA_F-serratus_M_contig1138.1201.1|organism=Fucus serratus male|type=mRNA|length=3775bp|location=Sequence derived from alignment at F-serratus_M_contig1138:235774..239548+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1138:235774..239548+ >mRNA_F-serratus_M_contig1138.1201.1 ID=mRNA_F-serratus_M_contig1138.1201.1|Name=mRNA_F-serratus_M_contig1138.1201.1|organism=Fucus serratus male|type=CDS|length=1356bp|location=Sequence derived from alignment at F-serratus_M_contig1138:235774..239548+ (Fucus serratus male)back to top |