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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 5 |
Model size | 2325 |
Cds size | 1788 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928791.3193347-UTR-F-serratus_M_contig1001:103657..103933 | 1622928791.3193347-UTR-F-serratus_M_contig1001:103657..103933 | Fucus serratus male | UTR | F-serratus_M_contig1001 103658..103933 + |
1690962573.477611-UTR-F-serratus_M_contig1001:103657..103933 | 1690962573.477611-UTR-F-serratus_M_contig1001:103657..103933 | Fucus serratus male | UTR | F-serratus_M_contig1001 103658..103933 + |
1622928791.3956587-UTR-F-serratus_M_contig1001:107327..107588 | 1622928791.3956587-UTR-F-serratus_M_contig1001:107327..107588 | Fucus serratus male | UTR | F-serratus_M_contig1001 107328..107588 + |
1690962573.5308583-UTR-F-serratus_M_contig1001:107327..107588 | 1690962573.5308583-UTR-F-serratus_M_contig1001:107327..107588 | Fucus serratus male | UTR | F-serratus_M_contig1001 107328..107588 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928791.3299742-CDS-F-serratus_M_contig1001:103933..104004 | 1622928791.3299742-CDS-F-serratus_M_contig1001:103933..104004 | Fucus serratus male | CDS | F-serratus_M_contig1001 103934..104004 + |
1690962573.4890997-CDS-F-serratus_M_contig1001:103933..104004 | 1690962573.4890997-CDS-F-serratus_M_contig1001:103933..104004 | Fucus serratus male | CDS | F-serratus_M_contig1001 103934..104004 + |
1622928791.3413289-CDS-F-serratus_M_contig1001:104531..105072 | 1622928791.3413289-CDS-F-serratus_M_contig1001:104531..105072 | Fucus serratus male | CDS | F-serratus_M_contig1001 104532..105072 + |
1690962573.4967768-CDS-F-serratus_M_contig1001:104531..105072 | 1690962573.4967768-CDS-F-serratus_M_contig1001:104531..105072 | Fucus serratus male | CDS | F-serratus_M_contig1001 104532..105072 + |
1622928791.3576128-CDS-F-serratus_M_contig1001:105087..106080 | 1622928791.3576128-CDS-F-serratus_M_contig1001:105087..106080 | Fucus serratus male | CDS | F-serratus_M_contig1001 105088..106080 + |
1690962573.506447-CDS-F-serratus_M_contig1001:105087..106080 | 1690962573.506447-CDS-F-serratus_M_contig1001:105087..106080 | Fucus serratus male | CDS | F-serratus_M_contig1001 105088..106080 + |
1622928791.3720329-CDS-F-serratus_M_contig1001:106662..106730 | 1622928791.3720329-CDS-F-serratus_M_contig1001:106662..106730 | Fucus serratus male | CDS | F-serratus_M_contig1001 106663..106730 + |
1690962573.5164077-CDS-F-serratus_M_contig1001:106662..106730 | 1690962573.5164077-CDS-F-serratus_M_contig1001:106662..106730 | Fucus serratus male | CDS | F-serratus_M_contig1001 106663..106730 + |
1622928791.3828824-CDS-F-serratus_M_contig1001:107212..107327 | 1622928791.3828824-CDS-F-serratus_M_contig1001:107212..107327 | Fucus serratus male | CDS | F-serratus_M_contig1001 107213..107327 + |
1690962573.523596-CDS-F-serratus_M_contig1001:107212..107327 | 1690962573.523596-CDS-F-serratus_M_contig1001:107212..107327 | Fucus serratus male | CDS | F-serratus_M_contig1001 107213..107327 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1001.125.1 >prot_F-serratus_M_contig1001.125.1 ID=prot_F-serratus_M_contig1001.125.1|Name=mRNA_F-serratus_M_contig1001.125.1|organism=Fucus serratus male|type=polypeptide|length=596bp
MLGTDSNGVGSHDRGGRNLAAILGPQEGFAHDGTPLERNWPRRESILRQS PRSLVGCNKSTPAAISTPHTDGAATFGSELLPLNHIPSLSSFLGTSSLPR GPETPENKSSRRHSPVCTPAGTNLPQQVGTIGRRANGCTRGTGSRISIRA NRRPSTTSPRSHAFNPAVAAKERESTLTKAADGWNAYVDTFKGDLAGREF ATNPFGPAEASDGVAKVSPLTGLVPLHGGQARSNPSSPLPTTSYGAIVLR SSARVGELQAPFAPSAPEQHHNPLLGTDESISSLDKTDAEHGVVEVGEAF GSSAPKRERMEKSGFGSSAGSDGDGFDVLNWLSWKNAGPQSGDGHCDANT STSTEAKIKNIDGGEGDPIAASGGGGNATPQDDDGNDGYTGVVRSATEWS GLERSCNKKHGEVVGGDVRAGRLRNNYNNVRSKTDAVNSPEPQPGDPLPR RVDLGLPSEERRGRRSQVGSQGLAINSSPKERKSSTSRGADSVPRAADGE SVLLSSVSAEGCWENITSTNGRPTEEDQREADELKRKELALADLEHSYCS DLSSFDLSLSPSEEGGCSAQDMSLSPAMAKLKCFNSACPRLPQEN* back to topmRNA from alignment at F-serratus_M_contig1001:103658..107588+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1001.125.1 ID=mRNA_F-serratus_M_contig1001.125.1|Name=mRNA_F-serratus_M_contig1001.125.1|organism=Fucus serratus male|type=mRNA|length=3931bp|location=Sequence derived from alignment at F-serratus_M_contig1001:103658..107588+ (Fucus serratus male) GGCGCTCTTGGCGGCGACGCGTTTGCTGGCGGAAGGGATGGACTGCCGGC
TCGGAGGCGAGCGTTGAAGGGCGCCTCGGTCGCCTCACCTGTTCAGGATG
TGTCAGACCGCGGTTCAACTTCGGAAAAAAACGTTTCTGATTGTGGTCTA
AATCCTCGAGATTCCTTGTCTGGCGAAGGCTTCTCTGAGACAGAAACCAG
AGAATCGGCGAGGAGCGATACCGGGGGGCGGGAGCGACTCTCGGATGTTG
TTGACACTGTTACACCGCGTCGTCGCATGCTCGGAACCGACTCAAACGGG
GTCGGCAGCCATGACAGAGGGGGGAGGAATCTTGCGGCTATATTGGGGTG
AGTGAGGGGGGAGACACGACCTGCTTTATTCTGTCATATTATTGGTCGCG
GCAGATACTGTACCACACTGGCGTTCTCACAAGCGGTAGATAAGACCAAG
TCGATTTCCCTGGCGCACTTTCGGTTCTTGGTTTTGCTCGAGAAGCGCCG
CGTGAATCCCCCCAGCCTCAAGGGTGTACCTTACAGTGTGCCTCTAGTCG
CGAAACATGTGTGTGTCGTGATATCAAAAAAGAGACCCTCGTAAGGTTTG
ACCGTGGTTTCCAAGGCCGTTCAAAACTTCCCCCGACTGCCGTGATCGAG
GGTGTGTCCATAGCCGCGTGATCACCATTCCGTGGGGGTTTATAAAACAA
GGCAAAGAGACGTTTCGAACCACCGTGTTTCAGACAAACAAATGTGCGTC
CCTAAGCTTTATTTCACACTTCTCGACACGACCATCGTGACCACTGCGAA
CGTTGTGACTGTTGTGACCGTTGACCTGTGCGTGCAACCGACTCACTCGT
ACTTTCATTCGTATTGTCGAGTAGCCCGCAAGAAGGCTTTGCCCATGACG
GGACACCGCTCGAAAGAAACTGGCCAAGGCGGGAATCTATCCTGCGGCAG
AGCCCTCGATCATTGGTGGGGTGCAACAAGTCAACTCCTGCGGCAATCTC
AACTCCGCATACTGATGGGGCGGCGACTTTTGGAAGCGAGCTCTTACCAT
TGAACCATATCCCGTCCTTATCTTCCTTTTTGGGAACATCGTCGCTGCCT
CGTGGCCCAGAAACGCCCGAAAATAAATCCTCACGTCGGCACTCGCCCGT
ATGCACTCCCGCCGGAACGAATCTTCCTCAACAAGTTGGTACTATTGGTC
GACGGGCCAACGGGTGCACGAGAGGTACCGGTAGCCGTATCTCGATAAGG
GCGAACAGGCGCCCTTCAACTACCTCGCCGCGCTCCCACGCATTCAACCC
AGCTGTGGCCGCAAAGGAACGAGAGTCCACCCTCACCAAGGCAGCCGACG
GTTGGAACGCGTACGTAGACACCTTTAAAGGCGACTTGGCGGGTCGTGAG
TTCGCTACCAATCCTGCCCGTTCGGAGAAGTTTGGTCCCGCCGAAGCTTC
GGACGGCGTGGCAAAAGTGAGCCCGCTCACCGGTCTTGTTCCTTTGCATG
GAGGCCAGGCGCGTAGCAATCCATCTTCTCCGTTGCCTACCACAAGTTAC
GGAGCGATTGTGTTGCGGTCGTCTGCGCGAGTGGGCGAGCTTCAGGCGCC
CTTTGCTCCGTCTGCGCCCGAGCAGCATCATAATCCTCTCCTGGGGACCG
ATGAGAGTATTTCATCGTTAGATAAAACGGATGCTGAGCACGGCGTTGTA
GAAGTTGGCGAGGCGTTTGGTTCGTCGGCTCCGAAAAGAGAGAGGATGGA
GAAGTCAGGCTTTGGTAGCAGCGCAGGCAGCGACGGCGATGGGTTTGATG
TTCTGAATTGGCTTTCCTGGAAGAACGCCGGCCCTCAGAGTGGTGATGGT
CACTGTGACGCGAACACGAGCACTTCGACCGAGGCCAAAATCAAAAACAT
CGATGGTGGCGAGGGCGATCCCATAGCTGCTTCCGGGGGTGGTGGCAATG
CCACTCCTCAGGACGATGATGGCAATGACGGTTACACTGGCGTCGTTCGT
TCAGCCACAGAGTGGTCGGGACTCGAAAGGAGTTGCAACAAGAAGCACGG
CGAGGTTGTTGGGGGTGACGTGCGCGCGGGAAGACTCCGTAACAATTACA
ACAATGTGCGAAGTAAAACTGATGCAGTAAATTCGCCGGAACCACAGCCC
GGCGATCCGTTGCCTAGGCGAGTCGACTTGGGACTACCCTCCGAAGAGAG
ACGTGGGCGCAGGAGTCAGGTGGGATCCCAAGGACTCGCGATAAATAGCA
GCCCCAAGGAAAGAAAATCTTCGACCAGCCGGGGAGCGGATTCTGTCCCT
CGCGCCGCGGACGGTGAAAGTGTTCTGTTGAGTTCCGTCTCTGCCGAGGG
ATGCTGGGAAAATATAACGAGTACGAACGGCAGGCCTACGGAAGAAGATC
AGCGTGAGGCGGATGAGTTGAAGGTATTAAGGTGTTGTGGGAAGGTAGTG
TAGTTTAGAGTAGTGCCACCACGAGGGAACAAGGGAACGAAATATAGTGC
AGGCCGTGACAAAGCGACAAAAACACGGATCTTACCCCGTCGCGATCACT
CCTGACGCATTTCGAGTTCGTGCTTTAGGAGGGAAAGTACCAGTTGCAAA
GAAACAACTCAAGTGTTTCTAGTACGTAGCGTAAGTCTGTACCATTACAA
ACGATAACCTCAAACCGTGAATTACTTCGAGAGCTTATACAGGGGTAATC
CACGCGGCGAAAAATGAGAGCGTGTCACGTGCTGATTGCTGATTGGTAAG
GCACCAGGGTCCCGAGCATTCGTGTCAAGAGTGACGTCATGATAGTAGTA
CTAACACCTCGTCCCTCGCGCCATCAAGTTGTTGGCGTGATGGAATGGAT
GGCGCGAACTTCCTATTTAGATCATGCGGTTGCTTTCGCTTTGACAAATA
TCTTGCATTATAAAAAGACAACATTTTACTCCGAGACCTTCCCCTCTTCC
CCTCTCGCCCCTCTCGCCCCCTCCTCACCATCTCGTCGGTCGTGCTCGCC
CACAGAGGAAGGAACTCGCGCTGGCCGATCTCGAGCACTCTTATTGCTCG
GATTTAAGTTCGTTCGACTTGAGGTGAAGCACGAATGAAGTTGCGTTCAA
TACATTATCTGTACGATGCTAAGATCATAATTGGATTACTATAATACCTC
AAGAACGACCCGCGTCGCGCTACTCGAGCAGTGCTCAGGTAGTGGACCCA
TCGAACCGAGGAGCACGTTTACGTTGATGACAGACCCCGATACTTGTTTT
GTGCAAAATCTATTCCGGTGTGGATAGAACGTATGCATAGCGCGGCTCAA
CCCTATTTTGCTTGCGGTTGATGGATTTCAAAGCATCGATGTCAAATGCC
GCACATCTAGGGCTAAGCTGAAGAACGATGACTGTTTCGAGCCGAAGAAA
CTTCTTCGCTGCTTATAGTCAAGATAGGGATACGCACACGTAATTTCGTC
CAAAGTGCGTGGAAACATGCCCCCCATTTCGGGAGCTCCCACCCAGCTCG
TGTCGGCCTCATACAGCTCTATGTTGCCAATTGCCAATCAAATGCGCCCA
TGCAGCCTGTCACCATCGGAGGAGGGAGGATGTTCTGCTCAAGACATGTC
TCTCTCACCAGCAATGGCTAAGCTCAAATGTTTCAACTCAGCCTGCCCAA
GATTGCCGCAGGAAAATTAGCGTGCTGTCTCGGTTTCCGACCAAGATGGA
GAGACCGATCTAGATTCGGTCGTACTCGCAAGTGCGGAAGGCAATGGAAA
AATAAGAATGACTGATGTCCCTTGTCCTATGGTGGCTTCAACCCCATCTG
CTCGGGAGGATTCATGCGTACAAGACAGTAGTACAGTGGTGCAGGCTTGG
GGCGACAAGGGAAGGATGCCACGAACGAGCTATCGGCGAATTGAGGTCGT
ATAGACATCTAGTTAGCAAATAAACCTTTAC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1001:103658..107588+ >mRNA_F-serratus_M_contig1001.125.1 ID=mRNA_F-serratus_M_contig1001.125.1|Name=mRNA_F-serratus_M_contig1001.125.1|organism=Fucus serratus male|type=CDS|length=3576bp|location=Sequence derived from alignment at F-serratus_M_contig1001:103658..107588+ (Fucus serratus male) ATGCTCGGAACCGACTCAAACGGGGTCGGCAGCCATGACAGAGGGGGGAG GAATCTTGCGGCTATATTGGGATGCTCGGAACCGACTCAAACGGGGTCGG CAGCCATGACAGAGGGGGGAGGAATCTTGCGGCTATATTGGGCCCGCAAG AAGGCTTTGCCCATGACGGGACACCGCTCGAAAGAAACTGGCCAAGGCGG GAATCTATCCTGCGGCAGAGCCCTCGATCATTGGTGGGGTGCAACAAGTC AACTCCTGCGGCAATCTCAACTCCGCATACTGATGGGGCGGCGACTTTTG GAAGCGAGCTCTTACCATTGAACCATATCCCGTCCTTATCTTCCTTTTTG GGAACATCGTCGCTGCCTCGTGGCCCAGAAACGCCCGAAAATAAATCCTC ACGTCGGCACTCGCCCGTATGCACTCCCGCCGGAACGAATCTTCCTCAAC AAGTTGGTACTATTGGTCGACGGGCCAACGGGTGCACGAGAGGTACCGGT AGCCGTATCTCGATAAGGGCGAACAGGCGCCCTTCAACTACCTCGCCGCG CTCCCACGCATTCAACCCAGCTGTGGCCGCAAAGGAACGAGAGTCCACCC TCACCAAGGCAGCCGACGGTTGGAACGCGTACGTAGACACCTTTAAAGGC GACTTGGCGGGTCGTGAGTTCGCTACCAATCCTCCCGCAAGAAGGCTTTG CCCATGACGGGACACCGCTCGAAAGAAACTGGCCAAGGCGGGAATCTATC CTGCGGCAGAGCCCTCGATCATTGGTGGGGTGCAACAAGTCAACTCCTGC GGCAATCTCAACTCCGCATACTGATGGGGCGGCGACTTTTGGAAGCGAGC TCTTACCATTGAACCATATCCCGTCCTTATCTTCCTTTTTGGGAACATCG TCGCTGCCTCGTGGCCCAGAAACGCCCGAAAATAAATCCTCACGTCGGCA CTCGCCCGTATGCACTCCCGCCGGAACGAATCTTCCTCAACAAGTTGGTA CTATTGGTCGACGGGCCAACGGGTGCACGAGAGGTACCGGTAGCCGTATC TCGATAAGGGCGAACAGGCGCCCTTCAACTACCTCGCCGCGCTCCCACGC ATTCAACCCAGCTGTGGCCGCAAAGGAACGAGAGTCCACCCTCACCAAGG CAGCCGACGGTTGGAACGCGTACGTAGACACCTTTAAAGGCGACTTGGCG GGTCGTGAGTTCGCTACCAATCCTTTTGGTCCCGCCGAAGCTTCGGACGG CGTGGCAAAAGTGAGCCCGCTCACCGGTCTTGTTCCTTTGCATGGAGGCC AGGCGCGTAGCAATCCATCTTCTCCGTTGCCTACCACAAGTTACGGAGCG ATTGTGTTGCGGTCGTCTGCGCGAGTGGGCGAGCTTCAGGCGCCCTTTGC TCCGTCTGCGCCCGAGCAGCATCATAATCCTCTCCTGGGGACCGATGAGA GTATTTCATCGTTAGATAAAACGGATGCTGAGCACGGCGTTGTAGAAGTT GGCGAGGCGTTTGGTTCGTCGGCTCCGAAAAGAGAGAGGATGGAGAAGTC AGGCTTTGGTAGCAGCGCAGGCAGCGACGGCGATGGGTTTGATGTTCTGA ATTGGCTTTCCTGGAAGAACGCCGGCCCTCAGAGTGGTGATGGTCACTGT GACGCGAACACGAGCACTTCGACCGAGGCCAAAATCAAAAACATCGATGG TGGCGAGGGCGATCCCATAGCTGCTTCCGGGGGTGGTGGCAATGCCACTC CTCAGGACGATGATGGCAATGACGGTTACACTGGCGTCGTTCGTTCAGCC ACAGAGTGGTCGGGACTCGAAAGGAGTTGCAACAAGAAGCACGGCGAGGT TGTTGGGGGTGACGTGCGCGCGGGAAGACTCCGTAACAATTACAACAATG TGCGAAGTAAAACTGATGCAGTAAATTCGCCGGAACCACAGCCCGGCGAT CCGTTGCCTAGGCGAGTCGACTTGGGACTACCCTCCGAAGAGAGACGTGG GCGCAGGAGTCAGGTGGGATCCCAAGGACTCGCGATAAATAGCAGCCCCA AGGAAAGAAAATCTTCGACCAGCCGGGGAGCGGATTCTGTCCCTCGCGCC GCGGACGGTGAAAGTGTTCTGTTGAGTTCCGTCTCTGCCGAGGGATGCTG GGAAAATATAACGAGTACGAACGGCAGGCCTACGGAAGAAGATCAGCGTG AGGCGGATGAGTTGAAGTTTGGTCCCGCCGAAGCTTCGGACGGCGTGGCA AAAGTGAGCCCGCTCACCGGTCTTGTTCCTTTGCATGGAGGCCAGGCGCG TAGCAATCCATCTTCTCCGTTGCCTACCACAAGTTACGGAGCGATTGTGT TGCGGTCGTCTGCGCGAGTGGGCGAGCTTCAGGCGCCCTTTGCTCCGTCT GCGCCCGAGCAGCATCATAATCCTCTCCTGGGGACCGATGAGAGTATTTC ATCGTTAGATAAAACGGATGCTGAGCACGGCGTTGTAGAAGTTGGCGAGG CGTTTGGTTCGTCGGCTCCGAAAAGAGAGAGGATGGAGAAGTCAGGCTTT GGTAGCAGCGCAGGCAGCGACGGCGATGGGTTTGATGTTCTGAATTGGCT TTCCTGGAAGAACGCCGGCCCTCAGAGTGGTGATGGTCACTGTGACGCGA ACACGAGCACTTCGACCGAGGCCAAAATCAAAAACATCGATGGTGGCGAG GGCGATCCCATAGCTGCTTCCGGGGGTGGTGGCAATGCCACTCCTCAGGA CGATGATGGCAATGACGGTTACACTGGCGTCGTTCGTTCAGCCACAGAGT GGTCGGGACTCGAAAGGAGTTGCAACAAGAAGCACGGCGAGGTTGTTGGG GGTGACGTGCGCGCGGGAAGACTCCGTAACAATTACAACAATGTGCGAAG TAAAACTGATGCAGTAAATTCGCCGGAACCACAGCCCGGCGATCCGTTGC CTAGGCGAGTCGACTTGGGACTACCCTCCGAAGAGAGACGTGGGCGCAGG AGTCAGGTGGGATCCCAAGGACTCGCGATAAATAGCAGCCCCAAGGAAAG AAAATCTTCGACCAGCCGGGGAGCGGATTCTGTCCCTCGCGCCGCGGACG GTGAAAGTGTTCTGTTGAGTTCCGTCTCTGCCGAGGGATGCTGGGAAAAT ATAACGAGTACGAACGGCAGGCCTACGGAAGAAGATCAGCGTGAGGCGGA TGAGTTGAAGAGGAAGGAACTCGCGCTGGCCGATCTCGAGCACTCTTATT GCTCGGATTTAAGTTCGTTCGACTTGAGAGGAAGGAACTCGCGCTGGCCG ATCTCGAGCACTCTTATTGCTCGGATTTAAGTTCGTTCGACTTGAGCCTG TCACCATCGGAGGAGGGAGGATGTTCTGCTCAAGACATGTCTCTCTCACC AGCAATGGCTAAGCTCAAATGTTTCAACTCAGCCTGCCCAAGATTGCCGC AGGAAAATTAGCCTGTCACCATCGGAGGAGGGAGGATGTTCTGCTCAAGA CATGTCTCTCTCACCAGCAATGGCTAAGCTCAAATGTTTCAACTCAGCCT GCCCAAGATTGCCGCAGGAAAATTAG back to top
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