prot_F-serratus_M_contig1132.1176.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1132.1176.1
Unique Nameprot_F-serratus_M_contig1132.1176.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length173
Homology
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: D7FXB9_ECTSI (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB9_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 9.510e-82
Identity = 116/170 (68.24%), Postives = 136/170 (80.00%), Query Frame = 0
Query:    1 MVSRVLGNLLKGGLFAVPVAITFNDIVGSPAEVRGRSMQPTINPDLSA-SDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEAHRGF 169
            M     GN+L+  LFAVPVA+ F+D++GSP +V GRSMQP INP L   S +   +DVVWQD+ SI+R+ YERGSIVVFRNPFDPKER+VKRLI V GDWVRP G++H+++RVP+G CWVEGDN  VSGDSN FGPIPLALIEAKVTHVLWPP R+  L QDLPE HRG 
Sbjct:    1 MAQAAAGNVLRASLFAVPVALAFHDVIGSPVQVEGRSMQPAINPHLGPESQQGESLDVVWQDKRSISRHIYERGSIVVFRNPFDPKERVVKRLIGVDGDWVRPRGNKHNLMRVPEGYCWVEGDNHGVSGDSNHFGPIPLALIEAKVTHVLWPPGRMRSLGQDLPEIHRGL 170          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A2K1K4M5_PHYPA (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K4M5_PHYPA)

HSP 1 Score: 155 bits (393), Expect = 3.250e-45
Identity = 77/150 (51.33%), Postives = 105/150 (70.00%), Query Frame = 0
Query:   19 VAITFNDIVGSPAEVRGRSMQPTINPDLSASDED---NDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEA 165
            V IT +D +GS A + GRSMQPT+NP   A D+     + D+++ ++LS+    + RG +VVFR+P +PK  +VKRLIA+ GDWV   G+ +D+L+VP+G CWVEGDN  +S DS  FGPIPL L++ KVTHV+WPP R GP+   LPE 
Sbjct:   22 VGITLSDRIGSVATMHGRSMQPTLNP---AEDDPWGYLNADLLFLEKLSLRTYNFSRGDVVVFRSPLEPKMWLVKRLIALQGDWVTVPGT-YDILQVPKGHCWVEGDNAEISLDSKSFGPIPLGLMKGKVTHVVWPPSRFGPVASHLPEG 167          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A176VCD5_MARPO (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VCD5_MARPO)

HSP 1 Score: 153 bits (386), Expect = 3.210e-44
Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    1 MVSRVLGNLLKGGLFAVPVAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEAHRGFRGR 172
            ++  +L   LKG    V   IT  D  GS   + GRSMQPT NP+ S S      D+V  ++  +    + RG +V FR+P DPKE +VKRLIA+  DW+   G+ +++L++P+G CWVEGDN  VS DS +FGPIP+AL+  +VTHV+WPP+R+GP++   P   R F G+
Sbjct:    6 VILGLLRRFLKGAAVGVAAGITVADRFGSVVRLNGRSMQPTFNPEDSDSPS---KDIVVVEKFCLRNFSFTRGDVVAFRSPQDPKEYLVKRLIALQEDWITVPGT-YEILQIPKGHCWVEGDNVDVSLDSKEFGPIPIALMRGRVTHVVWPPQRLGPVESKYPTG-RVFSGK 172          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A6L2JTS0_TANCI (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Anthemideae TaxID=102810 RepID=A0A6L2JTS0_TANCI)

HSP 1 Score: 152 bits (383), Expect = 7.620e-44
Identity = 77/170 (45.29%), Postives = 105/170 (61.76%), Query Frame = 0
Query:    1 MVS-RVLGNLLKGGLFAVPVAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEAHRGF 169
            MVS R L N+ K       V +T +D + S   VRG SM PT NP +S S E    D V  ++  +A  K+  G +VVF +P + KE+ +KR+ A+ GDW+  L   +D +++P+G CWVEGDNP  S DS  FGPIPL LI  +VTH++WPP RIG +D+ LP+   GF
Sbjct:    1 MVSPRFLWNVCKSSFTFGLVGLTLSDRIASVVHVRGFSMSPTFNPHISNSRESLSDDHVLVEKRCLADYKFSHGDVVVFSSPTNYKEKNLKRITAMPGDWIN-LPHSYDTVKIPEGHCWVEGDNPTNSMDSRSFGPIPLGLIRGRVTHIVWPPHRIGKIDRKLPQGGLGF 169          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A5J4YDN9_9CHLO (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YDN9_9CHLO)

HSP 1 Score: 149 bits (376), Expect = 1.050e-42
Identity = 74/147 (50.34%), Postives = 100/147 (68.03%), Query Frame = 0
Query:   18 PVAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDS-NQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLP 163
            PV +T ND+V  PA V GRSMQPT+NP  SAS      D+V  D+LSI   +Y RG +V+FR+P  P   ++KRL+A+ GDWV  L  R D+ ++PQG CW+EGDN  +S DS +++G +PLALI+ +VTHVLWPP R+  +    P
Sbjct:   20 PVFVTVNDLVAGPASVHGRSMQPTLNPSGSAS-----KDIVLVDKLSIRMYRYSRGDVVLFRSPASPDTILIKRLLALEGDWVA-LPDRVDIEKIPQGHCWLEGDNADLSEDSRSKYGAVPLALIQGRVTHVLWPPSRMSSVSSFTP 160          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A2G5CLM4_AQUCA (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CLM4_AQUCA)

HSP 1 Score: 149 bits (375), Expect = 1.240e-42
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 MVSRVLGNLLKGGLFAVPVAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEA 165
            M SR L N+ +  L    + +T +D     A VRG SM PT N   S S+     D V   +  + + K+  G IVV+R+P D KE+ +KR+IA+ GDW+    S  + L++P+G CWVEGDNP  S DS  FGPIPLALIE KVTH++WPP+R+G +++ LPE 
Sbjct:    1 MGSRFLWNVTRNVLTCGLIGLTISDRYAGIAPVRGLSMVPTFNSGHSTSERSFKDDRVLVTKFCLEKYKFTEGDIVVYRSPNDYKEKQIKRIIALEGDWINVPNS-FETLKIPRGHCWVEGDNPTNSVDSRSFGPIPLALIEGKVTHIIWPPQRVGKVEKILPEG 164          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A1R3IR88_COCAP (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3IR88_COCAP)

HSP 1 Score: 146 bits (369), Expect = 9.730e-42
Identity = 69/149 (46.31%), Postives = 98/149 (65.77%), Query Frame = 0
Query:   19 VAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEAHR 167
            +++TF+D++ S A VRG SM PT N    +  +    D V  ++L + + K+  G +VVF NP D KE+ VKR+I + GDWV   G+ +DV+RV QG CWVEGDN   S DS  FGP+PL L+  +VTH++WPP RIG ++  +P+ HR
Sbjct:   20 ISVTFSDLIASVAAVRGASMYPTFNSKTGSFLDSLSDDYVLVEKLCLRKYKFSHGDVVVFSNPSDHKEKQVKRIIGLPGDWV---GTHNDVVRVRQGHCWVEGDNSASSVDSRSFGPVPLGLVSGRVTHIIWPPHRIGSIETKVPQ-HR 164          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A1Q3C5B2_CEPFO (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C5B2_CEPFO)

HSP 1 Score: 145 bits (366), Expect = 2.940e-41
Identity = 70/166 (42.17%), Postives = 106/166 (63.86%), Query Frame = 0
Query:    4 RVLGNLLKGGLFAVPVAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEAHRGF 169
            + L ++ K  L A  +++TF+D   S   VRG SM PT NP   +S + +  D V  ++L + + K+ +G +VVFR+P + KE+ +KR+I + GDWV    S +DV+ +P+G CWVEGDN   S DS  FGP+PL LI+ +VTH++WPP+RIG + + +P     F
Sbjct:    5 KFLWDVSKSCLTAGLISLTFSDRFASIVPVRGTSMSPTFNPITDSSIKSSSDDYVLLEKLCLEKYKFSQGDVVVFRSPSNYKEKHIKRIIGLPGDWVGTPHS-YDVIEIPKGHCWVEGDNSLSSMDSKTFGPVPLGLIQGRVTHIVWPPQRIGEVKRSIPPGRLPF 169          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A2P5BQT5_PARAD (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BQT5_PARAD)

HSP 1 Score: 145 bits (365), Expect = 3.690e-41
Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = 0
Query:   19 VAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRH--DVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLPEA 165
            + +T +D   S A VRG SM PT NP  S+  +D     V  ++L ++  K+  G +VVF +P + KER +KR+I + GDWV   G RH  DV RVPQG CWVEGDNP  S DSN FGP+PL L++ +VTH++WPP+R+G +++ +PE 
Sbjct:   20 IGLTISDRYASLAAVRGASMSPTFNPSTSSLLDD----YVLVEKLCLSTYKFSHGDVVVFSSPQNHKERHIKRIIGLPGDWV---GIRHSSDVFRVPQGHCWVEGDNPASSMDSNTFGPVPLGLVQGRVTHIVWPPQRLGAVEKRVPEG 161          
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Match: A0A6P4APA3_ZIZJJ (Mitochondrial inner membrane protease subunit 2 n=3 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4APA3_ZIZJJ)

HSP 1 Score: 143 bits (361), Expect = 1.680e-40
Identity = 69/147 (46.94%), Postives = 98/147 (66.67%), Query Frame = 0
Query:   19 VAITFNDIVGSPAEVRGRSMQPTINPDLSASDEDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWVRPLGSRH--DVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLWPPRRIGPLDQDLP 163
            V +T +D   S + VRG SM PT NP +S+       D V  ++  + + K+  G +VVF +P + KE+ +KR+IA+ GDW+   G RH  DVLR+P G CWVEGDNP  S DSN FGPIPL L++ +VTH++WPP+RIG +++ +P
Sbjct:   20 VGLTVSDSFASVSPVRGASMSPTFNPSISSLMGLTTDDYVLIEKTCLMKYKFSHGDVVVFSSPSNHKEKHIKRVIALPGDWI---GIRHTSDVLRIPDGHCWVEGDNPSSSMDSNSFGPIPLGLVKGRVTHIVWPPQRIGAVEKRIP 163          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1132.1176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXB9_ECTSI9.510e-8268.24Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2K1K4M5_PHYPA3.250e-4551.33Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A176VCD5_MARPO3.210e-4444.77Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A6L2JTS0_TANCI7.620e-4445.29Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A5J4YDN9_9CHLO1.050e-4250.34Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2G5CLM4_AQUCA1.240e-4245.45Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A1R3IR88_COCAP9.730e-4246.31Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A1Q3C5B2_CEPFO2.940e-4142.17Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A2P5BQT5_PARAD3.690e-4147.65Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A6P4APA3_ZIZJJ1.680e-4046.94Mitochondrial inner membrane protease subunit 2 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 88..100
score: 49.63
coord: 112..131
score: 46.43
coord: 26..42
score: 33.19
NoneNo IPR availableGENE3D2.10.109.10coord: 24..166
e-value: 6.8E-22
score: 79.6
NoneNo IPR availablePANTHERPTHR46041FAMILY NOT NAMEDcoord: 6..158
IPR015927Peptidase S24/S26A/S26B/S26CPFAMPF00717Peptidase_S24coord: 32..101
e-value: 2.6E-7
score: 30.5
IPR037730Mitochondrial inner membrane protease subunit 2PANTHERPTHR46041:SF2MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2coord: 6..158
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 27..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1132contigF-serratus_M_contig1132:131912..147872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1132.1176.1mRNA_F-serratus_M_contig1132.1176.1Fucus serratus malemRNAF-serratus_M_contig1132 131289..147923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1132.1176.1 ID=prot_F-serratus_M_contig1132.1176.1|Name=mRNA_F-serratus_M_contig1132.1176.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MVSRVLGNLLKGGLFAVPVAITFNDIVGSPAEVRGRSMQPTINPDLSASD
EDNDVDVVWQDRLSIARNKYERGSIVVFRNPFDPKERMVKRLIAVGGDWV
RPLGSRHDVLRVPQGCCWVEGDNPRVSGDSNQFGPIPLALIEAKVTHVLW
PPRRIGPLDQDLPEAHRGFRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR015927Peptidase_S24_S26A/B/C
IPR037730IMP2
IPR036286LexA/Signal_pep-like_sf