prot_F-serratus_M_contig1132.1170.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1132.1170.1
Unique Nameprot_F-serratus_M_contig1132.1170.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length110
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1132.1170.1 vs. uniprot
Match: D7FZE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE0_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.250e-25
Identity = 58/102 (56.86%), Postives = 77/102 (75.49%), Query Frame = 0 
Query:   10 KITDSAVAALVHPVRFISSIAPALLEHVVNLQHLVRTSGCGV-DGHDIREWDYLVGRVLEQSASNKGKYVALVVLLPRVGALRLMRLCPSLVEQVVWAVGIR 110
            ++ +  ++ALVHP + ISS+AP LLEHV  ++ LV     GV +G    E + LVG+VL Q A++KGKYVAL VLLPRVGA+R++ LCPSLVEQ+VWAVG+R
Sbjct:  559 QVLEVTMSALVHPAKLISSMAPVLLEHVFAIRQLVPGGDGGVGEGEGRSEPERLVGQVLNQPAASKGKYVALSVLLPRVGAIRMLELCPSLVEQLVWAVGVR 660
[Close]
BLAST of mRNA_F-serratus_M_contig1132.1170.1 vs. uniprot
Match: A0A6H5JLY3_9PHAE (DUF2428 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY3_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 9.630e-9
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0 
Query:   70 SASNKGKYVALVVLLPRVGALRLMRLCPSLVEQVVWAVGIR 110
            +A +KGKYVAL VLLPRVGALR++ LC SLVEQ+VWAVG R
Sbjct:    3 AAVSKGKYVALSVLLPRVGALRMLELCSSLVEQLVWAVGFR 43
[Close]
BLAST of mRNA_F-serratus_M_contig1132.1170.1 vs. uniprot
Match: A0A836CDT5_9STRA (DUF2428 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.820e-6
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:   59 WDYLVGRVLEQSASNKGKYVALVVLLPRVGALRLMRLCPSLVEQVVWAVG 108
            W  +V ++L Q A  KGKY+AL  LLPRVGALRL+ L P LVE+++ AVG
Sbjct:  587 WQPVVEQMLSQPAEQKGKYMALSTLLPRVGALRLLPLQPDLVERLLDAVG 636
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1132.1170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZE0_ECTSI3.250e-2556.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLY3_9PHAE9.630e-975.61DUF2428 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CDT5_9STRA4.820e-658.00DUF2428 domain-containing protein n=1 Tax=Tribonem... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1132contigF-serratus_M_contig1132:12266..13202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1132.1170.1mRNA_F-serratus_M_contig1132.1170.1Fucus serratus malemRNAF-serratus_M_contig1132 12266..13204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1132.1170.1 ID=prot_F-serratus_M_contig1132.1170.1|Name=mRNA_F-serratus_M_contig1132.1170.1|organism=Fucus serratus male|type=polypeptide|length=110bp
QPELCQSLSKITDSAVAALVHPVRFISSIAPALLEHVVNLQHLVRTSGCG
VDGHDIREWDYLVGRVLEQSASNKGKYVALVVLLPRVGALRLMRLCPSLV
EQVVWAVGIR
back to top