prot_F-serratus_M_contig113.1169.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig113.1169.1
Unique Nameprot_F-serratus_M_contig113.1169.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length126
Homology
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 3.070e-33
Identity = 56/125 (44.80%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD D G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:   48 FDGCAIERDADAGTLRISQTAYIDSMVERFDVQSTSRIPATPGADLGPKREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 169          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.520e-32
Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:   48 FDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 169          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.890e-31
Identity = 55/125 (44.00%), Postives = 92/125 (73.60%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  ++V ++++ +TS+I  SPGVD+GP+++ E GG  E+P  R  +GS+MW+S  +RPDI+ A+ A +RH+H P+ RHWKA++++ +Y+  T+++G+ + RGSG
Sbjct:  231 FDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGG--EWP-VREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSG 352          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.730e-30
Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:  191 FDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIPATPGADLGPQREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 312          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.910e-30
Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:  255 FDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 376          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.110e-30
Identity = 55/125 (44.00%), Postives = 89/125 (71.20%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MV+++++ +TS I  SPGVDLGP+++ E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:  522 FDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGG--EWP-VREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 643          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.150e-30
Identity = 56/125 (44.80%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD D G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E + GG  E+P  R  VGS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:  559 FDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGG--EWP-VREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 680          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5JVW7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW7_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 6.050e-30
Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:  712 FDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPSTPGADLGPKREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 833          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 6.050e-30
Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct:  968 FDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 1089          
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 6.130e-30
Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    2 YTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPRKEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRHWKALLQVASYVNATKEIGLRFVRGSG 126
            + GCA ERD + G L I+Q A+  +MVE++++ +TS I  +PG DLGP++E E GG  E+P  R  +GS+MW+S  +RPD++ A+ A +RH+H P+ RHW A+ ++  Y+  T+++G+ + RGSG
Sbjct: 1347 FDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWP-VREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG 1468          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig113.1169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBH1_9PHAE3.070e-3344.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPT0_9PHAE4.520e-3244.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE8.890e-3144.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVD4_9PHAE1.730e-3044.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE1.910e-3044.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE3.110e-3044.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE3.150e-3044.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVW7_9PHAE6.050e-3044.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE6.050e-3044.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE6.130e-3044.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig113contigF-serratus_M_contig113:800234..800611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig113.1169.1mRNA_F-serratus_M_contig113.1169.1Fucus serratus malemRNAF-serratus_M_contig113 800234..800937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig113.1169.1 ID=prot_F-serratus_M_contig113.1169.1|Name=mRNA_F-serratus_M_contig113.1169.1|organism=Fucus serratus male|type=polypeptide|length=126bp
MYTGCAFERDWDNGILDINQAAFTVNMVEQYNISTTSNISGSPGVDLGPR
KEGEPGGNEEFPKYRALVGSLMWLSVMTRPDIANALCACSRHSHNPSPRH
WKALLQVASYVNATKEIGLRFVRGSG
back to top