mRNA_F-serratus_M_contig1128.1152.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: D7FI38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI) HSP 1 Score: 556 bits (1434), Expect = 9.080e-189 Identity = 312/639 (48.83%), Postives = 396/639 (61.97%), Query Frame = 1
Query: 19 VRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDGNIASRKAASELKTKRTEVPPTGQKRTRNRKSRKRRHLRKWRSGRRSKNGMRCLDGCLHTNSNGLKGRVCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDDEENNERAIMCEAVLPVSVYDVGRRLSGDPASAENIGRHLKRTKKRSDGEAP-----VDTVPESVSEIDEIFAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEGD-LGVYYGALGNLSGVEFIYTPNAVLAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVY--------SDPRSRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRE---LKLQVSNLEATTLEEDAFFLEGIGDLNDTAAVPQ----IMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTIAD--DARFSDSPKVLQNNLDFLSRGGKCESGLI 1866
+R L EYDAL+IIE VLVASD+SFEELY AF + FW+KGSN+ GT+F ++AE MW VLGHINGNAIYNN DPAFVEY+EYTRA W YE+PYDVAL +TI+DFPYSWPL+QRYS+KFV TNLISYVG EHV +VSDAVAG TLF+HG V D AS A V T ++ R RK +KR+ WR G +CLDGC +T+ +G +GRVCD +C+ +G+ GCGTK G YGT CR+C+ D A + D EN R IMC +PV V D+ + S + I ++ + + E VD + E V F + + RPF D+ RG +CAF++GR+D+ EVTV SILQF+PGMRVA+A L Y ++G L GV T N A L+AD++CG GT LI YVE S++SR FT+KDTHSP GDLLVV+ D RSR S +LG+++PSFT GT+L+LPV AN LR +++ ++ + L D + +AVPQ ++AAL Y R G+WF +P VWV +HLF+ SIW+IPLVKPRF C IA + + LQNNLDF SRGGKCE GLI
Sbjct: 43 LRKSLSEYDALSIIEPVVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFPSSAEASGMWQVLGHINGNAIYNNDDPAFVEYVEYTRAHWGYEHPYDVALGMTISDFPYSWPLYQRYSSKFVVTNLISYVGDEHVTQDTVSDAVAGKTLFVHGGGVADVKTASAPPAPVA------VQETARRSQRRRKLQKRKTRENWRRGHAGDETPKCLDGCEYTSKDGTRGRVCDANCSRRDVYGTLGCGTKDGAYGTECRACYNDGGKAHKQDTPEN--RVIMCSTAMPVDVRDLWLSTDSEDHSLQ-IAHAMEAEDREEEAEGSFERVDVDGIREGVISF---FEEEAERPFFQDLKRGNLCAFVSGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGLPGVTISSTHNPATASLFADRFCGAGTALILYVELGSVLSRPFTSKDTHSPRGDLLVVHRGGQGSYRDDERSRRS-------GLVLGLEAPSFTRGTDLVLPVGANKDLRGSLGMEMHADSVRRDGVGAAVMALTEPADFEEVSAVPQARNRMLAALAYARNTPGVWFGDPKVWVGQHLFQEASIWDIPLVKPRFTCAIALALEPDILRAATTLQNNLDFFSRGGKCEDGLI 662
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 516 bits (1330), Expect = 2.860e-172 Identity = 310/692 (44.80%), Postives = 393/692 (56.79%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNL----------------------------------------------------ISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDGNIASRKAASELKTKRTEVPPTGQKRTRNRKSRKRRHLRKWRSGRRSKNGMRCLDGCLHTNSNGLKGRVCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDDEENNERAIMCEAVLPVSVYDVGRRLSGDPASAENIGRHLKRTKKRSDGEAPVDTVPESVSEIDEI-------FAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEGD-LGVYYGALGNLSGVEFIYTPNAVLAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSDPR-SRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDAFFLEGIG---DLNDTAAVPQ----IMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTIADDARFSD--SPKVLQNNLDFLSRGGKCESGLI 1866
MFLDE VR L EYDAL+IIE DVLVASD+SFEELY AF + FW+KGSN+ GT+F ++AE EMW VLGHINGNAIYNN DPAFVEY+EYTRARW YE+PYDVALW+TI+DFPYS PL+QRYS+KFV TNL ISYVG EHV +VSDAVAG TLFIHG V D AS R R R G ++C DGC +T+++G +GRVCD +C+ G+ GCGTK G YGT CR+C+ D + A + D N RAIMC V+PV V + + + S + IG+ ++ DGE V+ E V +D + F + + RPF D+ RG +CAF+ GR+D+ EVTV SILQF+PGMRVA+A L Y ++G GV T N A L+AD++CG GT LI YVE S++SR FT KDTHSP GDLLVV+ + S + E + + +LG+++PSFT GT+L+LPV AN LRE ++ + D + + D + ++VPQ ++AAL Y R G+WF +P VW + LF+ SIW+IPL KPRF C IA + LQNNLDF SRGGKCE GLI
Sbjct: 42 MFLDESVRFSLSEYDALSIIEPDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFPSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSRPLYQRYSSKFVVTNLVGNYSRYTTMIRPQPGEGMRPNPPPLYWVSNNNSPTVDFSMPAPLHVRYVFKISYVGDEHVTQDTVSDAVAGKTLFIHGGDVADVITASAPXXXXXXXXXXXXXXXXXXXXXXXXXRGNR-----RRGNDGDETLKCTDGCKYTSNDGTRGRVCDANCSRRDVHGTLGCGTKDGAYGTECRACYNDGDEAHKQDTPGN--RAIMCSTVMPVDVRSLWLSIDNEDYSLQ-IGQAMEG----EDGEEEVEGSFERVG-VDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEASIWDIPLAKPRFTCAIALTLEPDSLHAATTLQNNLDFFSRGGKCEDGLI 720
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 1.810e-161 Identity = 305/701 (43.51%), Postives = 383/701 (54.64%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDGNIASRKAASEL-----------------------KTKRTEVPPTGQKRTRNRKS-----------------RKR-------------RHLRKWRSGRRS--KNGMRCLDGC-----------LHTNSNGLKGR-----VCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDDEENNERAI----MCEAVLPVSVYDVGRRLSGDPASAENIGRHLKRTKKRSDGEAPVDTVPESVSEIDEIFAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEGD-LGVYYGALGNLSGVEFIYTPNAVLAGLYADKYCG-PGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSDPRSRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDAFFLEGIGDLNDTAAVPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTI--ADDARFSDSPKVLQNNLDFLSRGGKCESGLI 1866
+FLDE +RS EYDALAIIEWDVLVA+D SFEELY AF + FW+KGSN+ GTNFH+++ + +MWHVLGHINGNAIYNN D AFVEY++YTRARW+ YPYDVALWLTI+DFPYSWPL+QR+SNKFVTTNLI+YVG HVD +V+DA+AG TLFIHG VD+G+ S + +E K K E P TR ++ R+R R L+KWR + KN + L +S + R D S G + G + G+ G L+ + N E E SV V R L D R + E P E+ F S RPF +DV R +CAF+AG V+++EVTVSS+L+FVPGMRV VA E D + Y A+G L GV T + A +AD+YCG T LIYY++T S+VSR+FT+KDTHSP GDLLVV+ S +L T+++LG ++P FT GT+LILPV ANA LR + T+ + +E + DL DTAAVPQ++AALQY R GIWF NP WV HLF+ SIWEIPLVKPRF C + A SD +LQ NLDF + GG CE G+I
Sbjct: 5 LFLDERIRSNFSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWEDNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVEKVNEANGTGKNGGASKVVRKLQNWKENEKWKTFEEPKWETSETRTNENVPKAARKLQADSEDVYDRRRLTATQDGSAPKVARKLQKWRDANKESGKNKWETTETAKNESVPKAARRLQADSEDVYDRRRLTATQDGSAPEGGSQAAEVEGRQQGV-GEEQDGSAPKVARKLQKWRDANKESGKNKWETTETAKDESVPKVSRELQADSEDVYTRRRLV---------ETPTFAASADRVEVSRFFEMESVRPFAEDVERNRVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVVFGKGHSG---DLADRTANVLGFEAPPFTTGTDLILPVGANADLR-----AALASEKTVNDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHLFQTASIWEIPLVKPRFTCELDHVSSADESDVADILQRNLDFFAMGGTCERGVI 687
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE) HSP 1 Score: 478 bits (1231), Expect = 4.000e-156 Identity = 311/836 (37.20%), Postives = 412/836 (49.28%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYV--------------------------------------------------------------------------------------------------------------------------------GAE------HVDSSSVSDAVAGNTLFIHG-----------------SRVDDGN---IASRKAASELKTKRTEVPPTGQKRTRNRKSRKRRHLRKWRSGRR----------------------------------------------SKNGMRCLDGCLHTNSNGLKGRVCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDDEENNERAIMCEAVLPVSVYDVGRRLS----GDPASAENIGRHLKRTKKRSDGEAPVDTVPESVSEIDEIFAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEGD-LGVYYGALGNLSGVEFIYTPNAVLAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYS-DPRSRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDA-----FFLEGIGDLNDTAAVPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTIADDARFSDSPK---VLQNNLDFLSRGGKCESGLI 1866
MFLDEDVRS L EYDAL+IIEWDVLVASD+SFEELY AF + FW+KGSN+ GT+FH+TAE EMW VLGHINGNAIYNN DPAFVEY+EYTRARW YE+PYDVALW+TI+DFPYSWPL+QRYS+KFV TNL+ V GA+ VD + D+ + S D+G +A R AA LK + + + + RK + +W++ + S + C C +T+ +G KGRVCD +C+T +G+ GCG K GIYG +CR C+ + + AL+ D +N RAIMC ++PV VY GRRLS GDP + + ++ + + VD V + F + + RPF D+ R +CAF+ GR+ + EVTV SILQF+PGMRVA+A E + L Y +LG L G T N+ A L+AD+YCG GT LI YVE S++SR FT+KDTHSP GDLLVV++ P S +L + ++S+LG +PSFTHGT+L+LP+ N ALRE + +L+ D LE + + +A+PQ++AAL Y+R G+WF++P WV ++LFK SIW++PLVKPR+ C IA SP VLQ+NLDF S+GGKC +GLI
Sbjct: 5 MFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLVGNVASFRATAAAAVALKKPEPAQQSSRKLTSVPKWKKAEKWRNGNDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNSVDKALKQDSPDNRAIMYDAVVVCSTVMPVDVYHRRMSAADEGEASRVARRLAA--LKEDASSPAEEVELAVKVDQDRKLTSVPRWKAKEKWRTANDDGIXXXXXXXXXXXXKXXGGEXXXXXXXXXXXXNGSSDDSSSSDPGCSSRCTYTSKDGTKGRVCDSNCSTPNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDN--RAIMCSTMMPVDVY--GRRLSASDEGDPL---RVAKMIEAEEVGDEWSVDVDRV-----KAIRFFEEAAERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRE---SLGFRLGASLQHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEPGSPNTANVLQSNLDFFSKGGKCANGLI 823
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 459 bits (1181), Expect = 1.620e-145 Identity = 338/1001 (33.77%), Postives = 442/1001 (44.16%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDGNIASRKAASE------LKTKR--TEVPP----------------------------------------------------------TGQKRTRNR------------------------------------KSRKR--------------------------------------------------------RHLRKWRSGRR--------------------------------------SKNGMRCLDGCLHTNSNGLKGRVCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDDEENNERAIMCEAVLPVSVYDVGRRLS----GDP-------------ASA---------ENI------------------------------------------------------------------GRHLKRTKKRSDGEA------------------------------------------------------PVDTVPESVSEID---------------------------EIFAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEGD-LGVYYGALGNLSGVEFIYTPNAVLAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSDPRSRPSY---ELTALTSSILGIKSPSFTHGTELILPVEANAALRE---LKLQVSNLEATTLEEDAFFLEGIGDLNDTAAVPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTIADDARFSDSPK---VLQNNLDFLSRGGKCESGLI 1866
MFLDEDVRS L EYDAL+IIEWDVLVASD+SFEELY AF + FW+KGSN+ GT+FH+ A+ EMW +LGHINGNAIYNN DPAFVEY+EYTRARW YE+PYDVALW+TI+DFPYSWPL+QRYS+KFV TNLIS VG EHV+ +VSDA+AGNTLFIHGS VD+GN+AS +A T+R TE P T + TR R K+RK+ + KW+ + S + CLDGC +T+ +G +GRVCD +C+ +G+ GCG KSG YG +CR+C+ D E A + D N RAIMC +PV VY GRRL+ DP AS+ E++ GR RSD P D P+ +++ F + RP+ ++ RG++CAF++G + + EVTV SILQF+PGM+VA+A E + L Y ++G L GV T N A L+ADKYC + LI YV S++SR+FT KDTHSP GDLLVV++ S+ SY EL+ +SS+LG ++PSFT GT+L+LP +AN +RE LK+ L+ + L+ + +AVPQ++AA+ Y+R+ G+WF++P WV ++LFK SIW+IPLVKPRF CTIA D S SPK VLQN++ F + GGKC +GLI
Sbjct: 120 MFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATEGDASVDVTATQRHLTEDVPKWKEQEKWKTSXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCMNGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVDVYDRRLTAVESDPLLVARDLEVLQKDASSPSVEEHRQLTEDVPKWKEQEKWKXXXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSSDEEGCLDGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPAN--RAIMCSTKMPVDVY--GRRLTPVDESDPLLVARGLEALQEDASSPPQEHRRLTEDVPKWKXXXXXXXXXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCLDGCDYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARTQDTPANRAIMCSTREPVDVYGRRLSAHPEDRFPQLAQQMEAEDSEDENSEGSYEPRVEVEVGREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYCS-FSELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAG--SQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIASDKLDSSSPKTAQVLQNSVVFFANGGKCANGLI 1113
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 389 bits (999), Expect = 1.790e-117 Identity = 268/771 (34.76%), Postives = 360/771 (46.69%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDG----NIASRKAAS------------------------------------------------------------------------------ELKTKRTEVPPTGQKRTRNRK-------SRKRRHLRK---------WRSG----------RRSKNG-------MRCLDGCLHTN-------------------SNGLKGR-------VCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDD--EENNERAIMCEAVLPVSVYDVGRRLSGDPASAENIGRHLKRTKKRSDGEAPVDTVPESVSEIDEIFAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEG-DLGVYYGALGNLSGVEFIYTPNAV-LAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSDPR--SRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDAFFLEGIGDLNDTAAVPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACT--IADDARFSDSPKVLQNNLDFLSRGGKCESGLI 1866
++LD +VR QL+EYDALAIIEWDV+VA D+SFE+LY AF G + FWIKGS + G NFH T + E HVLGHINGNAIYNN DPAFVE++ YT RW+Y YDVALW TI+DFPYSWPLWQR+S KFV +LI+ VG + +D +V AVA NTLFIHGS G + + KA S E + ++ Q R R + RR LR W G R ++ G M +DG + G + VCD SC TG +G + CG + YG++CR CF D E AL + + IMC P + + ++ P+ D+TRG+ICAF+ G + + EVTV SI+QF+PGMRVA+A + D+ V+ +LGNL GV + + LA L AD++CG GT+L++Y+ ++SR FT+KDTHS GDLLVVY++ S T S+LG SPSF+ G +++LPV N LREL L L+ ++ + +G + VP+++AAL Y+ G+WF+NP WV H+F+ SIW+IPLVKPRF C I+ A+ D L+ +L G CE G I
Sbjct: 214 LYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALATVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEGGDSRAVLRGNRGGGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATGCSNKCQMKTDTVCDRSCGTGR-YGDYNCGWRG--YGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPYDPANEPYLKDITRGQICAFMTGFSSFLKETEVTVKSIVQFMPGMRVAIATQDHDVSVFKRSLGNLPGVVISEAISPITLAPLLADRHCGKGTKLVFYMNPGELLSRKFTSKDTHSAAGDLLVVYAEVGRVGEASARRALATMSVLGFSSPSFSFGMDIMLPVHTNGQLRELLLSDPGATGKGLDRESQAVHALGKFSGVF-VPEVLAALAYSLNEPGLWFINPQQWVTHHMFQQASIWDIPLVKPRFGCAFDISMAAQGYDVAAALETHLGHFMSGSACERGFI 980
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 370 bits (949), Expect = 3.430e-112 Identity = 262/757 (34.61%), Postives = 357/757 (47.16%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDGNIASRKAASELKTKRTEVPPTGQKRTRNRKSRKRRHLRKWRSGRRSKNG--------MRCLDGCLHTNSNGLKG--------------RVCDDSCATGIPFGS-------FGCGT-KSGIYGTNCRSCFFDTELALEND----------DEENNERAIMCEAVLPVSV--------------------------YDVGRRLSG--------DPASAENIGRHLKRTKKR----SDGEAPVDTVP--------ESVSEIDEIFA-KMSHRP------------------------------------FTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEG-DLGVYYGALGNLSGVEFIY-TPNAVLAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSDPRSRPSYEL--TALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDAFFLEGIGDL----NDTAAVPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACT--IADDARFSDSPKVLQNNLDFLS--RGGKCESGLI 1866
+FL++ ++ +L + A+A+IEWDVLVA D SFE+LY AF + FW+KGS + GTNFH T + + WH+LGHINGNAIYNN DPAF +++E+T ARW Y Y YDVALW T++DFPYSWPLWQR+S+KFV+TNLI+ VG VD +V +A+A T+FIHGS G A+ K G R S L +G G C C T S L G VCD + + GS + CG +G +CR C+FD E AL+ D EE IMC+ + P Y+ R G D A+A + KRT R + E PV+ E + + E A KM++ ++ D+ RGE+CAF + + E +V S+ F+PGMRV +AV+ V+ LG VE + T A L AD +CG GT+LI Y+ +VSR F+ KDTH G+LLV Y++P Y + T T+S+LG +PSF+ GT+L LP N LR + + L + + D + I + A VP+++AAL Y+R P IWFLNP WV H+FK S+W++PLVKPRF C +A + D + L DF RG KCE G +
Sbjct: 43 LFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMAS-----LEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREASEEQPHHVIMCDTLRPPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVELTQAELDALEKERIEHVMEAAASKMANAAKQEKKTSNTKGHANPGGKTAGDEGEPDAPVHPAMIEYSKDLLRGEMCAFATAYYLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVEVVNATTTGGHASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTRGELLVPYTEPERLDEYHIKRTQATTSLLGFDAPSFSFGTDLFLPAWVNRELRRVLASGTALPSKAWKPDDRDFQRIAMSIMMETEDAFVPELLAALAYSRNPPEIWFLNPTQWVTHHMFKHASVWDVPLVKPRFLCAANLALAKQGYDVARELNRFADFSDGGRGKKCEMGYL 794
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE) HSP 1 Score: 371 bits (953), Expect = 1.260e-111 Identity = 322/1078 (29.87%), Postives = 417/1078 (38.68%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDG-NIASRKAASELKTKRTEVPPTGQKRTRNRKS------------------------------------RKR----------RHLRKWRSGRRS-------------KNGMRCL--------------DGCLH-----------------------TNSNGLKGR--------------------------------------------------------------------VCDDSCATGIP----------------FGSFGCGT-KSGIY------------------------------------GTNCRSCFFDT--------------------------------------------ELALEN----DDEENNERAIMCEAVLPVSVYD-----------------------------------------------VGRRLSGDP-----------ASAENIGRHLKRTKKRS----------------------------------------DGEAP-----------------------------------------------------VDTVPESVS----EIDEIFAKMSHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEGDLGVYYG-------------------------------ALGNLSGVEFIYTPNAVLAGLYADKYCG-PGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSDPRSRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDAFFLEGIGDLNDTAAVPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTI--ADDARFSDSPKVLQNNLDFLSRGGKCESGLIT 1869
MFLDE +RS EYDALAI+EWDVLVA+D SFEELY AF + FW+KGSN+ GTNFH+++ + +MWHVLGHINGNAIYNNKD AFVEY++YTR+RW+Y YPYDVALWLTI+DFPYSWPL+QR+SNKFVTTNLI+YVG HVD +V+DA+AG TLFIHG VD+G N++ +K T++ ++ +NRK R+R R L+KWR +S ++G R L DG + TN +G K +D A + + +F T KSG N R F T + LEN + NE L YD V R L D SA ++ R L++ + S DG AP ++T + S E+ F S RPF DDV RG +CAF+AG V+++EVTVSS+L+FVPGMRVAVA E D Y A+G L GV T + A +AD+YCG T LI+Y++T S+VSR+FT+KDTHSP GDLLVV+ ++ T+ +LG ++P FT GT++ILPV ANA LR + T+++ +E + DL DTAAVPQ++AALQY R GIWF NP WV HLF+ SIWEIPLVKPRF C + + A D +LQ NLDF + GG CE+G+I+
Sbjct: 133 MFLDERIRSNFSEYDALAILEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVQKVNEANGTRKNGGASKVVRKVQNRKENEMWKTSEGKNWHTTEATTNESGAKMARELQEDAYDRRRLTATQDGKVARKLQKWRDANKSGKNKWQTSETTTNESGARELQEDAYDRRRLTATQDGKVARKLQKWRDASKSGKNKRHTTEATTNESGTKAARELQEDAYDRRRLTATVDGSAPKVARKLQKWRDANKSGKNKWQTSETTTNESGARELQEDAYDRRSLTATEDGGAAKVARKLQKWRDANKSGKNKWQTFETATNKSGARELQEDAYDRRRLTTTDDGSAPKVARKLQKWRDVNKSAMNKRPTFETTTNESGTKAARELQEDAYDRRRLTATVDGSAPKVARKLQKWRIANDNVLENKWQSSETTTNESGTKVTRELQEDAYDRRSLTATKDGSAPSVARKLQKWRDASNNLLENKWQTSETTTNNSGTKVTRELQEDAYDRRSLTATKDGSAPSVARKLQKWRDASNNLLENKWQTSETTTNNSGTKVTRELQEDAYDRRSLTATEDGSAPKVARKLQKWRDVNNNSAKNKGQTSETTTNESGAKAKRELQATDSEDVNTLRRVLETPTTAASADRDEVSSFFEMESKRPFVDDVERGRLCAFVAGTASQVDEIEVTVSSVLEFVPGMRVAVAAEADAVDAYERCDSMISRLAAFWVARDHYTINRFVANPFRRAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIFYLKTGSVVSRSFTSKDTHSPQGDLLVVFGKGHHG---DVADRTTDVLGFEAPPFTTGTDVILPVGANAELR-----AALASEKTVDDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTSHLFQDASIWEIPLVKPRFTCELDPSSSADEFDVADILQRNLDFFAMGGTCEAGVIS 1202
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 343 bits (880), Expect = 1.830e-99 Identity = 188/347 (54.18%), Postives = 233/347 (67.15%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDGNIASRKA-----ASELKTKR---TEVPPTGQKRTRNRKSRKRRHLRKWRSGRR---------------SKNGMRCLDGCLHTNSNGLKGRVCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALENDDEENNERAIMCEAVLPVSVYDVGRRLSGDPASAEN---IGRHLKRTKK 963
MFLDE VRS L YDAL+IIEWDVLVASD+SFEELY AF + FW+KGSN+ GT+FH+ A+ EMWHVLGHINGNAIYNN DPAFVEY+EYTRARW YE+PYDVALW+TI+DFPYSWPL+QRYS+KFV TNLIS VG EHV+ +VSDAVAG TLFIHGS VD+GN+AS +A A ++ T + TE P Q + KWR+ S + C+DGC +T+ +G +GRVCD +C++ +G+ GCG K+G YG +CR+C+ D E A + D N RAIMC +PV VY GRRL+ PA N + R L+ +K
Sbjct: 122 MFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDAAVDVATSQRQLTEDVPKWQAQE------------KWRNTSXXXXXXXXXXKKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSPNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGN--RAIMCSTKMPVDVY--GRRLT--PADESNPLLVARDLEALQK 450
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE) HSP 1 Score: 338 bits (868), Expect = 4.920e-99 Identity = 252/792 (31.82%), Postives = 361/792 (45.58%), Query Frame = 1
Query: 1 MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGSNVGGTNFHATAEVQEMWHVLGHINGNAIYNNKDPAFVEYIEYTRARWQYEYPYDVALWLTIADFPYSWPLWQRYSNKFVTTNLISYVGAEHVDSSSVSDAVAGNTLFIHGSRVDDG-------NIASRKAAS---ELKTKRTEVPPTGQKRTRNRK--------SRKRRHL----------------------------------------------------RKWRS-------GR----------------------------------RSKNGMRCLD---------------------------------GCLHTNSNGLKGRVCDDSCATGIPFGSFGCGTKSGIYGTNCRSCFFDTELALEND--DEENNERAIMCEAVLPVSVYDVGRRLSGDPASAENIGRHLKRTKKRSDGEA----PVDTVPE---------SVSEIDEIFAKM-SHRPFTDDVTRGEICAFIAGRIDDVNKLEVTVSSILQFVPGMRVAVAVEG-DLGVYYGALGNLSGVEF-IYTPNAVLAGLYADKYCGPGTRLIYYVETNSIVSRTFTAKDTHSPNGDLLVVYSD----PRSRPSYELTALTSSILGIKSPSFTHGTELILPVEANAALRELKLQVSNLEATTLEEDAFFLEGIGDLNDTAA--VPQIMAALQYTRRPSGIWFLNPHVWVAEHLFKPVSIWEIPLVKPRFACTI--ADDARFSDSPKVLQNNLDFLSRGGKCESGLI 1866
++LD +R Q +YDALA++EW+V+VA D SFEELY AF G + FW+KGS + + H E +GHINGNAIYNN D FV+Y+ +T RW+Y PYD ALW TI+DFPYSWPLWQR+S KFVTTNLI+ VG VD + DAVAG TLFIHG+ D G +A R S + P+G +R +R HL + WRS GR R + G+ ++ GC H + + VCD SC TG G + C + YG NCR C+ D A+ + + +MC P + + P AE + R + + + +D +A P ++P S + DE + ++ PF + RG+ICAF+ + + +V+V SI QF+PGMRVA+A + D+ ++ G + V + + A L AD++CG GT+LI Y++ ++ RTFT++DTHSP GDLLV YS+ +SR + L A+ +LG K PSF+ GT++ILPV+ N LR L S + + L+ + L + VP+++A+ Y+R +G+ F+NP WV H+F+ SIW+IPLVKPRF+C I + + D L+ L G C G I
Sbjct: 184 LYLDSTIRCQFADYDALAVMEWNVIVAHDRSFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGGVSMVGSNELAERCTVSCGFRFPNAHATMAPSGTATVCDRSCYAGGRDGARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVAFEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQRQQGGVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSH-QCHEMDDAVCDRSCGTGR-HGDYNCNWRG--YGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWE----SPVEAEKV-RAMVKLDEEADADAQEKAPQTSMPAPLPHSFNTGSATLTDEATSSNPANEPFVTGIKRGQICAFLTSNTFFLKETQVSVKSIGQFMPGMRVAIATDANDVSLFKRVFGTVPEVRVSVAIRSTSRAPLLADRHCGEGTKLILYMKAGELLWRTFTSRDTHSPAGDLLVAYSELDRVGQSRKNKALAAML--VLGFKGPSFSFGTDIILPVDVNRELRNFLLSDSTAVKGRVSTNGD-LQAVHALGNVPGLYVPEVLASFAYSRNAAGLRFINPRQWVTHHMFQKASIWDIPLVKPRFSCVIDISMAVKGYDVAAALEEQLSHFVSGTSCAWGSI 963 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1128.1152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1128.1152.1 >prot_F-serratus_M_contig1128.1152.1 ID=prot_F-serratus_M_contig1128.1152.1|Name=mRNA_F-serratus_M_contig1128.1152.1|organism=Fucus serratus male|type=polypeptide|length=625bp MFLDEDVRSQLVEYDALAIIEWDVLVASDSSFEELYKTAFAGGDTFWIKGback to top mRNA from alignment at F-serratus_M_contig1128:38799..49047- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1128.1152.1 ID=mRNA_F-serratus_M_contig1128.1152.1|Name=mRNA_F-serratus_M_contig1128.1152.1|organism=Fucus serratus male|type=mRNA|length=10249bp|location=Sequence derived from alignment at F-serratus_M_contig1128:38799..49047- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1128:38799..49047- >mRNA_F-serratus_M_contig1128.1152.1 ID=mRNA_F-serratus_M_contig1128.1152.1|Name=mRNA_F-serratus_M_contig1128.1152.1|organism=Fucus serratus male|type=CDS|length=3750bp|location=Sequence derived from alignment at F-serratus_M_contig1128:38799..49047- (Fucus serratus male)back to top |