mRNA_F-serratus_M_contig1127.1151.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A6H5L7Y5_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y5_9PHAE) HSP 1 Score: 298 bits (762), Expect = 2.720e-90 Identity = 158/268 (58.96%), Postives = 184/268 (68.66%), Query Frame = 1
Query: 1 RSPDHYQRVMKVGIGDVDTIIENRVAHAG-GQEQMILGRNWNIIKRVFVHADGEFWTAGLPPT------QTKRSEALVAEGGGG----------------GGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADLGEPIAVLELHPRDLMYIPRRATGEERVGAIDSGWPHEAAVNGTARVGGGRRPTTPGAGAA 735
RSP+HY+ ++ G+GDV+++IE V+ +G G+E M+LG +WNIIKRVFV ADGEFWTAGLPP+ Q +RS + + G G RVV L EAR AF +GGFSVVINRLQRRWRGV + ALEDVLG PVNANLYMTPP QGFEAHFDWMDGIVVQ+ GSKTW+LYDEMV PRPD+K+KP AA LGEPIAVL+LHP D+MYIPR GWPHEAAVNGTA G R +P AA
Sbjct: 3 RSPNHYESLVGFGLGDVESVIEKGVSLSGEGEEPMVLGSDWNIIKRVFVQADGEFWTAGLPPSTLATDKQERRSSSSSSRTSGATDGWGSNTPPAPGKTHAGGADRVVFLEEARKAFHRGGFSVVINRLQRRWRGVLRASRALEDVLGQPVNANLYMTPPQSQGFEAHFDWMDGIVVQLTGSKTWILYDEMVTMPRPDMKFKPKAAALGEPIAVLDLHPGDMMYIPR-------------GWPHEAAVNGTAARPAGGRGASPSRSAA 257
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: D7G4T0_ECTSI (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T0_ECTSI) HSP 1 Score: 278 bits (710), Expect = 4.110e-82 Identity = 147/246 (59.76%), Postives = 174/246 (70.73%), Query Frame = 1
Query: 1 RSPDHYQRVMKVGIGDVDTIIENRVAHAG-GQEQMILGRNWNIIKRVFVHADGEFWTAGLPPTQTKRSEALVAEGGGGGGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADLGEPIAVLELHPRDLMYIPRRATGEERVGAIDSGWPHEAAVNGTARVGGGRRPTTPGAGAA 735
RSP+HY R+++ G+GDV+++IE V+ +G G+E M+LG +WNIIKRVFV AD + + +PP K G RVVSL EAR AF +GGFSVVINRLQRRWRGV + ALE VLG PVNANLYMTPP QGFEAHFDWMDGIVVQ+ GSKTW+LY EMV PRPDLK+KP AA+LGEPIAVL+L+P D+MYIPR GWPHEAAVNGTA GG R +P + A
Sbjct: 82 RSPNHYDRLVEFGLGDVESVIEKGVSLSGEGEEPMVLGSDWNIIKRVFVQAD-DGPGSNVPPAPGKTHA----------GGADRVVSLEEARKAFHRGGFSVVINRLQRRWRGVLRASRALEHVLGQPVNANLYMTPPQSQGFEAHFDWMDGIVVQLTGSKTWILYHEMVTMPRPDLKFKPKAAELGEPIAVLDLYPGDMMYIPR-------------GWPHEAAVNGTAARPGGGRGASPSSSTA 303
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A7S0VDM9_9CRYP (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VDM9_9CRYP) HSP 1 Score: 127 bits (318), Expect = 1.970e-29 Identity = 79/230 (34.35%), Postives = 120/230 (52.17%), Query Frame = 1
Query: 1 RSPDHYQRVMKVGIGDVDTIIENRVAHAGGQEQMI------LGRNWNIIKRVFVHADGEFWTAGLPPTQTKRSEALVAEGGGGGGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADL-GEPIAVLELHPRDLMYIPRRATGEERVGAIDSGWPHEA 669
+ P ++++++ G+ D+ ++++ VA G + + + LG ++ ++KR DGE+W+ G P G A R + GF++V+N L R RGVA +A +LE G V ANLY+TPPG QGFE H+D M+ IV+QV+GSK W LYD +V PRP+ ++KP A + G+ + L D +YIPR GW HEA
Sbjct: 66 KDPKYFEKIL--GMPDLQAVLDSCVAVNGSRAEPMRNAAGGLGSDYRLVKRT-KGPDGEWWSGGAP---------------------GDSHDSAAIRELVHEKGFTLVLNHLDMRVRGVARLARSLEKQTGLAVQANLYLTPPGSQGFEVHWDPMETIVLQVSGSKLWHLYDPLVPLPRPEQRFKPTGAQVEGQAKRSVMLEAGDTLYIPR-------------GWLHEA 258
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A7S4HAY3_GUITH (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HAY3_GUITH) HSP 1 Score: 115 bits (287), Expect = 4.730e-24 Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 94 EQMILGRNWNIIKRVFVHADGEFWTAGLPPTQTKRSEALVAEGGGGGGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADLGEPIA-VLELHPRDLMYIPRRATGEERVGAIDSGWPHEAAVN 678
++MI G +++++K+V DGEFW+ +P K+ + + + K GF++VIN R+ G+ A +ED LG+ V NLY TPP QGFE HFD M+ +V+Q+ GSKTW +Y+ ++A PRP+ K+KP ++ L P ++PR GW HEA N
Sbjct: 107 DEMISGEDYHLVKKV-KGKDGEFWSGRVPGRTHKKDDVIK----------------------WMKRGFTLVINNADMRYPGLVGAAQRMEDALGYAVQMNLYFTPPSSQGFEVHFDPMNTLVLQLEGSKTWEVYNPIIALPRPEQKFKPKHKEIHHGSRQTFTLTPGSTFFLPR-------------GWLHEAHTN 266
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A7S4HAY2_GUITH (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4HAY2_GUITH) HSP 1 Score: 115 bits (287), Expect = 1.850e-23 Identity = 65/196 (33.16%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 94 EQMILGRNWNIIKRVFVHADGEFWTAGLPPTQTKRSEALVAEGGGGGGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADLGEPIA-VLELHPRDLMYIPRRATGEERVGAIDSGWPHEAAVN 678
++MI G +++++K+V DGEFW+ +P K+ + + + K GF++VIN R+ G+ A +ED LG+ V NLY TPP QGFE HFD M+ +V+Q+ GSKTW +Y+ ++A PRP+ K+KP ++ L P ++PR GW HEA N
Sbjct: 107 DEMISGEDYHLVKKV-KGKDGEFWSGRVPGRTHKKDDVIK----------------------WMKRGFTLVINNADMRYPGLVGAAQRMEDALGYAVQMNLYFTPPSSQGFEVHFDPMNTLVLQLEGSKTWEVYNPIIALPRPEQKFKPKHKEIHHGSRQTFTLTPGSTFFLPR-------------GWLHEAHTN 266
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A0G4IJ20_PLABS (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJ20_PLABS) HSP 1 Score: 107 bits (266), Expect = 1.640e-21 Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 100 MILGRNWNIIKRVFVHADGEFWTAGLPPTQTKRSEALVAEGGGGGGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVA-LALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEM--VAAPRPDLKYKPAAADLGEPIAV-LELHPRDLMYIPRRATGEERVGAIDS 651
M+ G ++ + +R + DGE+W+ LP V AF GGF++++NR RRWR +A + L + P+NANLY+TP QGFEAH DWM+ IV+Q+ G K W LY + V P P++ KP+++ L + A+ L L P D++YIP E G D+
Sbjct: 1 MVSGVDFLMSRRTRLK-DGEYWSTMLPIP---------------------VPDFTSIYKAFSLGGFTLIVNRAHRRWRPIASICELVGRTIASFPINANLYLTPKLAQGFEAHQDWMEVIVIQLEGMKHWRLYPDFPSVRLPFPEMIVKPSSSSLTKERALDLTLSPGDVLYIPAGVVHEASTGTTDT 166
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A3P3Y8C2_PLABS (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y8C2_PLABS) HSP 1 Score: 109 bits (272), Expect = 2.570e-21 Identity = 67/194 (34.54%), Postives = 98/194 (50.52%), Query Frame = 1
Query: 82 AGGQEQMILGRNWNIIKRVFVHADGEFWTAGLPPTQTKRSEALVAEGGGGGGSEGRVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVA-LALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEM--VAAPRPDLKYKPAAADLGEPIAV-LELHPRDLMYIPRRATGEERVGAIDS 651
AG M+ G ++ + +R + DGE+W+ LP V AF GGF++++NR RRWR +A + L + P+NANLY+TP QGFEAH DWM+ IV+Q+ G K W LY + V P P++ KP+++ L + A+ L L P D++YIP E G D+
Sbjct: 125 AGVDTDMVSGVDFLMSRRTRLK-DGEYWSTMLPIP---------------------VPDFTSIYKAFSLGGFTLIVNRAHRRWRPIASICELVGRTIASFPINANLYLTPKLAQGFEAHQDWMEVIVIQLEGMKHWRLYPDFPSVRLPFPEMIVKPSSSSLTKERALDLTLSPGDVLYIPAGVVHEASTGTTDT 296
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: Q091R3_STIAD (Cupin 4 family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) TaxID=378806 RepID=Q091R3_STIAD) HSP 1 Score: 102 bits (255), Expect = 4.740e-20 Identity = 54/131 (41.22%), Postives = 75/131 (57.25%), Query Frame = 1
Query: 259 LAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADLGEPIAVLELHPRDLMYIPRRATGEERVGAIDS 651
L + +AA+++G +++VIN++ + W V A+E+ L HPV NLYMTPPG QGF+AHFD MD V+QV GSK W + V P PD ++ L + EL D++YIPR E R S
Sbjct: 80 LEQVQAAWREG-YTIVINKVGQFWEPVGRFCAAVEEELHHPVGVNLYMTPPGAQGFKAHFDIMDAFVLQVEGSKVWQVRGPQVTLPLPDEHTATSSESLPPVLLEQELKRGDVLYIPRGFVHEARTAQTHS 209
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A0H4WS94_9DELT (Cupin 4 family protein n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WS94_9DELT) HSP 1 Score: 102 bits (253), Expect = 8.620e-20 Identity = 55/125 (44.00%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 259 LAEARAAFQKGGFSVVINRLQRRWRGVAEVALALEDVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDEMVAAPRPDLKYKPAAADLGEPIAVLELHPRDLMYIPRRATGEER 633
L + +AA+++G F++VINRL R W V A+E+ L HPV ANLYMTPPG QGF+AHFD MD V+QV G+K W + P PD ++ L + EL +++YIPR E R
Sbjct: 80 LEQVQAAWREG-FTLVINRLGRFWEPVGRFCAAVEEELHHPVGANLYMTPPGAQGFKAHFDVMDAFVLQVEGAKVWQVRGPQRVLPLPDEHTTELSSPLPPVLMEHELKSGEVLYIPRGFIHEAR 203
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Match: A0A7S1Y1A8_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1A8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.650e-18 Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 247 RVVSLAEARAAFQKGGFSVVINRLQRRWRGVAEVALALE-DVLGHPVNANLYMTPPGCQGFEAHFDWMDGIVVQVAGSKTWVLYDE-MVAAPRPDLKYKPAAADLGEP--IAVLELHPRDLMYIPR 612
RV +L +A A G F++V+++LQ W ++E A LE + V+ NLYMTPP GFE+H+DWMD IV+Q+AG KTW + E V +LKYKP+ A+L E L+P D++YIPR
Sbjct: 157 RVSTLEDAVMAHHAG-FTLVVDKLQNHWPSISEFARELEVETQQTHVSCNLYMTPPNRSGFESHWDWMDVIVLQLAGQKTWSVASEPTVYLSNEELKYKPSLAELNETSWYDTFVLNPGDVLYIPR 281 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1127.1151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1127.1151.1 >prot_F-serratus_M_contig1127.1151.1 ID=prot_F-serratus_M_contig1127.1151.1|Name=mRNA_F-serratus_M_contig1127.1151.1|organism=Fucus serratus male|type=polypeptide|length=243bp MKVGIGDVDTIIENRVAHAGGQEQMILGRNWNIIKRVFVHADGEFWTAGLback to top mRNA from alignment at F-serratus_M_contig1127:285204..295416- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1127.1151.1 ID=mRNA_F-serratus_M_contig1127.1151.1|Name=mRNA_F-serratus_M_contig1127.1151.1|organism=Fucus serratus male|type=mRNA|length=10213bp|location=Sequence derived from alignment at F-serratus_M_contig1127:285204..295416- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1127:285204..295416- >mRNA_F-serratus_M_contig1127.1151.1 ID=mRNA_F-serratus_M_contig1127.1151.1|Name=mRNA_F-serratus_M_contig1127.1151.1|organism=Fucus serratus male|type=CDS|length=1458bp|location=Sequence derived from alignment at F-serratus_M_contig1127:285204..295416- (Fucus serratus male)back to top |