prot_F-serratus_M_contig1126.1142.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1126.1142.1
Unique Nameprot_F-serratus_M_contig1126.1142.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length697
Homology
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BLAST of mRNA_F-serratus_M_contig1126.1142.1 vs. uniprot
Match: D7FIW5_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIW5_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 1.690e-33
Identity = 145/345 (42.03%), Postives = 169/345 (48.99%), Query Frame = 0 
Query:  403 AMDDDGKLPDQVVGMAEGAKITDAEKASIARTVERKRRSLAVAAVSAAVAASDAGDAVYPSLR------------RCHPLSPTMHVLGATANTTD---SQQWVYLGDDQEGADTGEEDEDEADVEHDDGRAERGRLPVAEGLNACSPRGSRMIVGTDVADGFGRSLGGSSEPDFLGVGARGGGAGAVSXXXXXXXXXXXXXXX-------------------------RRSSREEQV--SRRCSSDD------CAAEVSRLKIELDRTRKCVACLNRDRDTLLFPCKHLVLCGPCYGRVVRRAEDQA-DADEAEGEGG--GQSRNGRCPTCRADICGHLSGVIIN 696
            A+D+DGKLP+QVVGMAEG+ IT AEK +IA  V  +RR ++   V        AG A  P  R            R  PL  +M +   TA  T    S  + Y           EE  +                         + +G          DG G S   SSE    G+           XXXXXXXXXXXXXXX                         +RSSREEQ+  SRR +S         AAE+SRL+IELDR RKCVACL+RDRDTLLFPCKHLVLC  CY RVVR+AED A   D A G GG  G    GRCPTCRADICGHLSG++IN
Sbjct:  364 ALDEDGKLPEQVVGMAEGSNITTAEKEAIAEAVMERRRLMSPGGVG-----ESAGSASLPHARQSGXXXXXXXXERLLPLPRSMAMARGTAPVTSDLMSGHFAY-----------EEATEXXXXXXXXXXXXXXXXXXXXXXGGLAMQGVVHARRLQPRDGMGPS---SSEDGGRGMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAXXXXXXXXHQRSSREEQMASSRRPASSPSHDHSLAAAELSRLRIELDRARKCVACLSRDRDTLLFPCKHLVLCSQCYTRVVRQAEDDAVGVDAAAGIGGPPGVLGTGRCPTCRADICGHLSGIVIN 689
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BLAST of mRNA_F-serratus_M_contig1126.1142.1 vs. uniprot
Match: A0A6H5K0E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.990e-7
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:   15 LDAAKRGDQHFLRLYLDQFEADVNLRDDETQGTLLHWACSY 55
            +DAAK GDQH LR YLD+   DVNLRDD TQGTLLH   ++
Sbjct:   11 IDAAKAGDQHRLRSYLDERNGDVNLRDDSTQGTLLHTPTTF 51
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BLAST of mRNA_F-serratus_M_contig1126.1142.1 vs. uniprot
Match: A0A383VPS7_TETOB (RING-type E3 ubiquitin transferase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VPS7_TETOB)

HSP 1 Score: 64.3 bits (155), Expect = 6.490e-7
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 0 
Query:  618 ELDRTRKCVACLNRDRDTLLFPCKHLVLCGPCYGRVVRRAEDQADADEAEGEGGGQSRNGRCPTCRADICGHLSGVII 695
            +L +   CV CL+  RDTLL PCKHLVLC  C   + + A+ Q  +  + G      R+  CP CR  +   ++G+I+
Sbjct:  713 QLHQATHCVVCLDAPRDTLLLPCKHLVLCQGCSCHLQQLAQRQGGSSSSSG------RSAVCPVCRVPVASQVAGIIL 784
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1126.1142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIW5_ECTSI1.690e-3342.03RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K0E0_9PHAE2.990e-765.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A383VPS7_TETOB6.490e-737.18RING-type E3 ubiquitin transferase n=1 Tax=Tetrade... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 390..404
score: 43.03
coord: 342..357
score: 43.68
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 341..370
e-value: 6.1E-4
score: 29.1
coord: 143..172
e-value: 0.0033
score: 26.7
coord: 374..403
e-value: 4.7E-4
score: 29.5
coord: 308..337
e-value: 2.3E-6
score: 37.1
coord: 176..205
e-value: 0.0067
score: 25.6
coord: 242..271
e-value: 0.0019
score: 27.4
coord: 77..106
e-value: 0.1
score: 21.7
coord: 209..238
e-value: 2.2E-4
score: 30.6
coord: 275..304
e-value: 0.0098
score: 25.1
coord: 44..73
e-value: 0.15
score: 21.1
coord: 110..139
e-value: 3.3E-4
score: 30.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 242..274
score: 13.25
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 209..241
score: 15.28
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 44..76
score: 10.873
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 110..142
score: 12.342
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 275..307
score: 9.564
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 308..340
score: 14.88
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 374..406
score: 12.209
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 77..109
score: 10.045
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 143..175
score: 11.167
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 341..373
score: 10.339
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 176..208
score: 11.942
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 625..682
e-value: 4.6E-4
score: 29.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 625..683
score: 9.362
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 195..305
e-value: 2.1E-38
score: 133.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 116..194
e-value: 1.3E-26
score: 95.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 306..430
e-value: 2.4E-36
score: 126.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..115
e-value: 6.2E-29
score: 102.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 47..411
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 248..339
e-value: 1.4E-17
score: 64.1
coord: 17..108
e-value: 3.5E-12
score: 46.7
coord: 109..172
e-value: 1.8E-11
score: 44.5
coord: 178..240
e-value: 3.7E-12
score: 46.7
coord: 343..403
e-value: 3.4E-10
score: 40.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 17..411
score: 120.152
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 608..694
e-value: 1.8E-10
score: 42.0
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 623..686
e-value: 1.9E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR24178:SF9ANKYRIN REPEAT AND SOCS BOX PROTEIN 3coord: 214..420
coord: 23..229
coord: 105..330
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 23..229
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 214..420
coord: 105..330
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 621..686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1126contigF-serratus_M_contig1126:142048..165211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1126.1142.1mRNA_F-serratus_M_contig1126.1142.1Fucus serratus malemRNAF-serratus_M_contig1126 142008..165243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1126.1142.1 ID=prot_F-serratus_M_contig1126.1142.1|Name=mRNA_F-serratus_M_contig1126.1142.1|organism=Fucus serratus male|type=polypeptide|length=697bp
MAAAAPVMDYEAKALDAAKRGDQHFLRLYLDQFEADVNLRDDETQGTLLH
WACSYGRLGAVSLLLERGADMVATDNERWTGLHWACHSSATDTARLLVER
GAPVDDRDSQEWTPLHVACHAGRTDTVRFLLSAGAAVSARTEKRLTALHI
ACESGFTDTARVLLDAGLSVDAVDDEAYSPLHLASAGGHTDTVRLLLQSG
SAPDSSTERNHRPLHLAAQYGHSSVVKLLLEAGAEVDVRDDGSYTPTHLA
CTYGHTETTRLLLENGADVEALDSEEWSPFHWACQLGNVYTARLLIAAGA
DQAARTSRGHQALHLAAENGHADTVRMLLDNGADPEAKDEVQYTPLHWAA
QYGHLEVACLLLGSGAGPSETADYRDTPLHLACLLGHGGVVELLLECGAD
PFAMDDDGKLPDQVVGMAEGAKITDAEKASIARTVERKRRSLAVAAVSAA
VAASDAGDAVYPSLRRCHPLSPTMHVLGATANTTDSQQWVYLGDDQEGAD
TGEEDEDEADVEHDDGRAERGRLPVAEGLNACSPRGSRMIVGTDVADGFG
RSLGGSSEPDFLGVGARGGGAGAVSGGARAGARSSRRGGHRRSSREEQVS
RRCSSDDCAAEVSRLKIELDRTRKCVACLNRDRDTLLFPCKHLVLCGPCY
GRVVRRAEDQADADEAEGEGGGQSRNGRCPTCRADICGHLSGVIIN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR001841Znf_RING
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR013083Znf_RING/FYVE/PHD