mRNA_F-serratus_M_contig1122.1122.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1122.1122.1
Unique NamemRNA_F-serratus_M_contig1122.1122.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: D7G872_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G872_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 3.700e-142
Identity = 208/295 (70.51%), Postives = 249/295 (84.41%), Query Frame = 1
Query:    1 PNVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASEVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAEPGTELPHVWPPGGLFYGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVL 885
            P+VV CVH LGYVP++QT+PMI  SLFSIAAGGS+GPEAPLVAVSA++S ++SM +F+HDIVMV+KCTIIGMSAGL A FGVQLGG+LFALEVL+TMGMQFF+ AVY+IG+GG+CLAVYRGLQGE FG+IW F    LS+A+EV+LGA++G +AG V I FR VF  + +G+  +GLG+FE T  PI L ALGGL +S LGVL+PP+MFW EFEI  IAEPG +LPH+WP GG+FYGLERY WE+ PMY+LVG VKLLAIACTVQ+GFRGGFIFPLFFAGAS GR L  + + VL
Sbjct:  706 PDVVHCVHELGYVPMRQTLPMICCSLFSIAAGGSLGPEAPLVAVSASVSGYISMYYFRHDIVMVRKCTIIGMSAGLSAFFGVQLGGALFALEVLHTMGMQFFDVAVYAIGSGGVCLAVYRGLQGEEFGQIWPFPESPLSSATEVILGAVVGAMAGGVGIAFRRVFRKIGEGVSILGLGHFEDTKSPIILCALGGLCVSALGVLVPPSMFWGEFEIASIAEPGKDLPHIWPQGGVFYGLERYQWESGPMYLLVGLVKLLAIACTVQSGFRGGFIFPLFFAGASFGRALLSITDDVL 1000          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: A0A8J9WP55_9CHLO (Probable chloride channel protein CLC-e n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP55_9CHLO)

HSP 1 Score: 262 bits (669), Expect = 6.810e-80
Identity = 139/289 (48.10%), Postives = 187/289 (64.71%), Query Frame = 1
Query:    1 PNVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASE-VVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAEPGTELPHVWPPGGLFYGLERYPWETAPM-YILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGL 861
            P VV  +HT G + I Q   M V S FSIAAGGS+GPEA L+A+  + +SWL+   F      ++ C ++GM+AGL A FGV LGGSLF+LEVL+  G+QF+E A Y++  G ICLAV+RGL+ E+FG +W F    L   S  ++LGAL+G+IA  +++ F  +  G+ K   RIGL      + PI    +GG+ I ++GVLLPPTMFW EFEI  +A P   L H+WP GG++        +  P+ YI +GFVKLLAI+ TV +GFRGGFIFP FFAG + G  +
Sbjct:  148 PEVVHQIHTSGRIAISQAPSMFVCSAFSIAAGGSLGPEAALLALCGSTTSWLARKVFGARGQHLRNCALMGMTAGLAAFFGVALGGSLFSLEVLHRTGLQFYEVATYAVATGVICLAVFRGLKRESFGAVWDFQVPFLEVDSRHIILGALMGVIAAGLALCFMHLHWGLKKLWLRIGL---HEHHSPIKCGVIGGILIGIIGVLLPPTMFWGEFEINTLANPSRPLAHIWPQGGIWGTHVFLNGQYGPVIYITIGFVKLLAISITVLSGFRGGFIFPTFFAGTAFGHAI 433          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: A0A5J4XNN3_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XNN3_9CHLO)

HSP 1 Score: 258 bits (660), Expect = 1.060e-78
Identity = 134/289 (46.37%), Postives = 182/289 (62.98%), Query Frame = 1
Query:    1 PNVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGF---APVDLSTASEVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAEPGTELPHVWPPGGLFYGLERYPWE--TAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIG 852
            P+ V  +H  GY+ I ++  M + S FSIAAGGS+GPEAPL+A+  A  SW   +  ++    ++ C ++GM+AGL A FGV LGGSLFALEVL+  GMQF+E A Y++G G +CL V+R L G  FG IW F   AP        V+LGA++G+IA   +I F  +     K +  +GL    T   P+     GG  I ++GVLLPP MFW EFEIG +A P T LPH+WP GG+ +GLE +     T  + +++  VKL+ ++ TV +GFRGGFIFPLF AG S+G
Sbjct:  133 PDTVRDIHEQGYISINKSPSMFLCSTFSIAAGGSLGPEAPLLALCGATCSWFGKSVLRYKGQKLRNCALLGMTAGLAAFFGVALGGSLFALEVLHRSGMQFYEIATYAVGTGALCLVVFRALSGIPFGAIWVFTKAAPHFHVDFRHVLLGAVVGVIAALFAILFMNIHRAFVKVVSWVGLHEHHT---PVRSGLFGGFVIGVIGVLLPPVMFWGEFEIGTLAAPSTVLPHIWPKGGV-WGLEPFQQNHYTPQLLLVIAVVKLITVSVTVNSGFRGGFIFPLFMAGTSLG 417          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: I0YW15_COCSC (Clc chloride channel n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YW15_COCSC)

HSP 1 Score: 257 bits (657), Expect = 2.870e-76
Identity = 138/289 (47.75%), Postives = 187/289 (64.71%), Query Frame = 1
Query:    1 PNVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASE-VVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAEPGTELPHVWPPGGLF-YGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGL 861
            P VV  +HT G + I Q   M V S FSIAAGGS+GPEA L+A+  + +S+L+   F      ++ C ++GM+AGL A FGV LGGSLF+LEVL+  G+QF+E A Y++  G ICLAV+RGL+ E+FG +W F    L   S  ++LGAL+G++A  +++ F  +  G+ K   R+GL      + PI    +GGL I ++GVLLPPTMFW EFEI  +A P   L H+WP GG++  GL          Y+L+GFVKLLAI+ TV +GFRGGFIFP FFAG + G  +
Sbjct:  147 PEVVHQIHTSGRIAISQAPSMFVCSAFSIAAGGSLGPEAALLALCGSTTSYLARKVFGARGQHLRNCALMGMTAGLAAFFGVALGGSLFSLEVLHRTGLQFYEVATYAVATGVICLAVFRGLKRESFGAVWEFELPFLEVDSRHIILGALMGVVAAGLALCFMHLHWGLKKLWLRMGL---HEHHAPIKCGVIGGLLIGIIGVLLPPTMFWGEFEINSLANPSRPLAHIWPQGGIWGTGLFMGGHYGPGTYVLIGFVKLLAISITVLSGFRGGFIFPTFFAGTAFGHAI 432          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: A0A836CDB9_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB9_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.820e-75
Identity = 144/315 (45.71%), Postives = 187/315 (59.37%), Query Frame = 1
Query:    1 PNVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFE-----------TAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASEVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNR--PIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAEPGTELPHVWPPGGLFYGL------ERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVLP 888
            PNVV+CVH  G VP++Q   M   SLFSIAAG S+GPEAPL                     MV+K T++GMSAGL A FGV LGG+LFALEV +T+G+Q+F             A ++I +G ICLA+YRG Q   FG IW F  V   +AS V++G ++G+I  A+ + F  +   + + ++  GLG+FE      PI LA +GGL I  LGVLLPPTMFWSE EI  +      LPHVWP  G++  L      + +PW +A     V   KL+AI+ +V AG RGGFIFPLFF GA+ GR L    E++LP
Sbjct:  107 PNVVECVHRHGCVPLRQAPAMAACSLFSIAAGASLGPEAPLAPS------------------MVRKATLMGMSAGLAAFFGVPLGGALFALEVCHTIGLQYFXXXXXXXXXXXXVAPHAIFSGVICLAIYRGAQSATFGAIWQFPEVPKCSASAVLVGVVLGVIGAAIGLAFAVLHRWLGRAVKWFGLGSFEERRHKYPILLATMGGLVIGTLGVLLPPTMFWSELEIATLGGHPLPLPHVWPRTGVWPLLSAAAVVDPFPWHSARACAAVVVAKLIAISASVHAGLRGGFIFPLFFTGAAAGRAL----EALLP 399          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: R7QI83_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI83_CHOCR)

HSP 1 Score: 231 bits (588), Expect = 1.340e-67
Identity = 128/298 (42.95%), Postives = 182/298 (61.07%), Query Frame = 1
Query:   10 VDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIV-MVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDL--STASEVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAE--PGTELPHVWPPGGLFYGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVLP 888
            V CVH +GYVPI     M+ +S  SI  GGS+GPEAPLVA+ A+I+ W+S+  FK     +V+K T+ GM+  L A FGV LGGSLFALE+ + +G ++FE A+ +I +G  CL V+RG+ G   G I+ F P  L  S+A  V +GA++GL+   ++  F      V K +++     F  ++ P+ L+  GG+ +  LG+L+P T FW EFE+  I    P + LPH+WP  GL  G E   + TA    +VG  KL+AI+ TV  G+RGGFIFP F AGA+ GR +  +  S+ P
Sbjct:  171 VKCVHKMGYVPIGHAPAMVASSQLSILGGGSLGPEAPLVAICASIAGWVSIYLFKQKYKNVVRKHTLCGMACALAAFFGVPLGGSLFALEINSRLGYEYFEHALEAIFSGVTCLVVFRGMAGLPIGPIYFFTPETLKDSSAKLVCIGAILGLVGAGIAAIFAHGHWAVVKKLDQ-----FNISSDPLKLSIFGGVGVVTLGLLIPQTFFWGEFEMQTIGSLSPASSLPHIWPTSGL-NGFEITGFTTA---FIVGVAKLIAISFTVAGGYRGGFIFPFFAAGAAFGRAICFLFPSIPP 459          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: A0A7S0BQK1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQK1_9RHOD)

HSP 1 Score: 228 bits (580), Expect = 3.890e-67
Identity = 130/295 (44.07%), Postives = 175/295 (59.32%), Query Frame = 1
Query:   10 VDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIV-MVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASEVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAEPG-TELPHVWPPGGLFYGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVLP 888
            V CVH  GYV +  T  M+VAS FSI AG S+GPEAPLVA+ AAI+ W+S N FKH    +++K T+ GM+  L A FGV LGGSLFALE+ + +G ++ E A+ ++ +G  CLAV+RGL G   G IW      L  AS  ++G   G + G       AVF  +   +  +    +   ++P+ LA LGG+ I+ LGVL+P +MFW E+E   IA  G T LPHVWP  GL          +A   + +G  KL+AI+ TV  GFRGG+IFP F AGA+ GR +     +V P
Sbjct:  123 VKCVHEFGYVDMGHTPSMVVASQFSIIAGASLGPEAPLVAICAAIAGWVSRNLFKHTQKNLIRKHTLCGMACALAAFFGVPLGGSLFALEINHRLGYEYVEHAMVAVTSGTTCLAVFRGLAGLPIGPIWQIEVGTLPAASAGLVGY--GFLLGLFGASIAAVFTNLHGRLGNLMNTTWRLKDKPVKLAVLGGIVIACLGVLVPHSMFWGEYEFQSIASLGSTPLPHVWPTSGL----TSLGPTSALACLTIGVAKLVAISFTVWGGFRGGYIFPFFAAGAAFGRAINFTFPAVPP 411          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: A0A2V3J338_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J338_9FLOR)

HSP 1 Score: 218 bits (555), Expect = 4.870e-64
Identity = 124/298 (41.61%), Postives = 178/298 (59.73%), Query Frame = 1
Query:   10 VDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKHDIV-MVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASE--VVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAE--PGTELPHVWPPGGLFYGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVLP 888
            + CVH  GY+ +   +PM+V S  SI  G S+GPEAPLVA+ A+I  W+S   FK     +V+K T+ GM+  L A FGV LGGSLFALEV + +G +++E A+ +I +G ICL V+R L       I+ F  V L  +S   V+ GAL+GLI   ++  F      + K ++++G       + P+ L+  GG+ I +LG+L+P T+FW E+E+  I    P  +LPH+WP  GL  G E   + +A   +L GF KLLAI+ +V  G+RGGFIFP F AGAS GR +  +   + P
Sbjct:   99 IKCVHKDGYIALDHVLPMLVVSQVSIVGGASLGPEAPLVAICASIGGWISTAVFKQRYKNLVRKHTLCGMACALAAFFGVPLGGSLFALEVNSRLGYEYYEHALEAIASGTICLVVFRTLAQLPIEPIYKFTAVKLEASSTQFVLTGALLGLIGAGIASLFAHGHKAIVKRLKKLGWH-----DDPVKLSIFGGVGIIILGILIPHTLFWGEYEMQTIGSLSPAAKLPHIWPTTGLT-GFEITGFGSA---VLAGFAKLLAISFSVAGGYRGGFIFPFFAAGASFGRAIWYLFPGMSP 387          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: A0A7S2ECV6_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECV6_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.470e-63
Identity = 127/293 (43.34%), Postives = 171/293 (58.36%), Query Frame = 1
Query:   10 VDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKH-DIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTAS--EVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGL-GNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIAE--PGTELPHVWPPGGLFYGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMV 870
            + CVH   Y+ +   +PM+ AS FSI  GGS+GPEAPLVA+ AA+  ++S   FK  +  +V+K T++GM+  L A FG  LGGSLFALEV + MG+++FE  + +I  G +CLAV+RGL G     IW      L  A   +V+ GA +GL    V+  F      V       GL  N     R +  A +    I  LG+L+P TMFW EFE   I+   P +EL H+WP     YGL  +  +TA   ++VGF KL+AI+ TV  G+RGGFIFP F AGA++GR LQ V
Sbjct:  158 IKCVHEKAYISMSHVMPMVAASQFSILGGGSLGPEAPLVAICAALGGFVSRKVFKQRNRNVVRKHTLMGMAGALAAFFGCPLGGSLFALEVNSRMGIEYFEHMLEAIFCGEVCLAVFRGLSGLPIEPIWSITAEKLEGADPLQVIYGAFVGLCGAFVAFLFAMFHSKVMAMYAHFGLLDNKHAVKRALSAAVV----IITLGMLIPQTMFWGEFEFQQISTMAPASELDHIWPT----YGLIGFEMDTAWKCLIVGFAKLVAISFTVAGGYRGGFIFPFFAAGAALGRALQAV 442          
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Match: K0T3P6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T3P6_THAOC)

HSP 1 Score: 218 bits (554), Expect = 2.870e-62
Identity = 128/303 (42.24%), Postives = 184/303 (60.73%), Query Frame = 1
Query:    4 NVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISSWLSMNFFKH-DIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQFFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTA-----SEVVLGALIGLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLLGVLLPPTMFWSEFEIGVIA--EPGTELPHVWPPGGLFYGLERYPWETAPMYILVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVLP 888
            ++ D +   GY      +PM+VASLFSI AGGS+GPEAPLVA+ AA++  +S + FK  +  +V+K T +GM+  L A FGV LGGSLFALEV +  G+++FE ++ +I AG IC+  +R L G    +IW  A  D  T      S+++LG ++G + G ++  +      +     R+GL + +   R +  A +G + I  +G+L+P TMFW E+E+ V+A  EP  +LPHVWP  GL  G E    +T    ++ GF KL+AI+ TV  GFRGGFIFP F AGA+ GR L  V  S+ P
Sbjct:  270 SLTDLLVKKGYKDPSYIIPMVVASLFSIVAGGSLGPEAPLVAICAALAGLISRSVFKQRNTNIVRKHTFMGMAGALAAFFGVPLGGSLFALEVASRFGVEYFEHSMEAIFAGLICVVAFRSLAGLELEQIW--ATQDSPTILHCEPSKILLGLVLGCVGGFLAFLWANFHWRLMGLFGRLGLLD-DNNTRALPRALVGSIGIISIGMLIPHTMFWGEWEVPVLARMEPAVDLPHVWPTSGLI-GFEM---DTCAKCLITGFAKLIAISFTVAGGFRGGFIFPFFTAGAAFGRALCFVFPSISP 565          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1122.1122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G872_ECTSI3.700e-14270.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J9WP55_9CHLO6.810e-8048.10Probable chloride channel protein CLC-e n=1 Tax=Co... [more]
A0A5J4XNN3_9CHLO1.060e-7846.37Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
I0YW15_COCSC2.870e-7647.75Clc chloride channel n=1 Tax=Coccomyxa subellipsoi... [more]
A0A836CDB9_9STRA1.820e-7545.71Chloride channel n=1 Tax=Tribonema minus TaxID=303... [more]
R7QI83_CHOCR1.340e-6742.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0BQK1_9RHOD3.890e-6744.07Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2V3J338_9FLOR4.870e-6441.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ECV6_9STRA1.470e-6343.34Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
K0T3P6_THAOC2.870e-6242.24Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1122contigF-serratus_M_contig1122:58286..60430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.8
Seed ortholog evalue8.1e-120
Seed eggNOG ortholog2880.D7G872
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Voltage gated chloride channel
EggNOG OGs2S9DC@2759,COG0038@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size893
Cds size891
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1122.1122.1prot_F-serratus_M_contig1122.1122.1Fucus serratus malepolypeptideF-serratus_M_contig1122 58286..60430 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929017.7667093-CDS-F-serratus_M_contig1122:58285..585411622929017.7667093-CDS-F-serratus_M_contig1122:58285..58541Fucus serratus maleCDSF-serratus_M_contig1122 58286..58541 +
1690962667.99048-CDS-F-serratus_M_contig1122:58285..585411690962667.99048-CDS-F-serratus_M_contig1122:58285..58541Fucus serratus maleCDSF-serratus_M_contig1122 58286..58541 +
1622929017.77725-CDS-F-serratus_M_contig1122:58970..592021622929017.77725-CDS-F-serratus_M_contig1122:58970..59202Fucus serratus maleCDSF-serratus_M_contig1122 58971..59202 +
1690962668.0025537-CDS-F-serratus_M_contig1122:58970..592021690962668.0025537-CDS-F-serratus_M_contig1122:58970..59202Fucus serratus maleCDSF-serratus_M_contig1122 58971..59202 +
1622929017.7872052-CDS-F-serratus_M_contig1122:59570..597751622929017.7872052-CDS-F-serratus_M_contig1122:59570..59775Fucus serratus maleCDSF-serratus_M_contig1122 59571..59775 +
1690962668.0159364-CDS-F-serratus_M_contig1122:59570..597751690962668.0159364-CDS-F-serratus_M_contig1122:59570..59775Fucus serratus maleCDSF-serratus_M_contig1122 59571..59775 +
1622929017.8003776-CDS-F-serratus_M_contig1122:59996..601101622929017.8003776-CDS-F-serratus_M_contig1122:59996..60110Fucus serratus maleCDSF-serratus_M_contig1122 59997..60110 +
1690962668.0241299-CDS-F-serratus_M_contig1122:59996..601101690962668.0241299-CDS-F-serratus_M_contig1122:59996..60110Fucus serratus maleCDSF-serratus_M_contig1122 59997..60110 +
1622929017.8102365-CDS-F-serratus_M_contig1122:60346..604301622929017.8102365-CDS-F-serratus_M_contig1122:60346..60430Fucus serratus maleCDSF-serratus_M_contig1122 60347..60430 +
1690962668.0334496-CDS-F-serratus_M_contig1122:60346..604301690962668.0334496-CDS-F-serratus_M_contig1122:60346..60430Fucus serratus maleCDSF-serratus_M_contig1122 60347..60430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1122.1122.1

>prot_F-serratus_M_contig1122.1122.1 ID=prot_F-serratus_M_contig1122.1122.1|Name=mRNA_F-serratus_M_contig1122.1122.1|organism=Fucus serratus male|type=polypeptide|length=297bp
PNVVDCVHTLGYVPIKQTVPMIVASLFSIAAGGSVGPEAPLVAVSAAISS
WLSMNFFKHDIVMVQKCTIIGMSAGLGALFGVQLGGSLFALEVLNTMGMQ
FFETAVYSIGAGGICLAVYRGLQGEAFGEIWGFAPVDLSTASEVVLGALI
GLIAGAVSIFFRAVFCGVAKGIERIGLGNFETTNRPIFLAALGGLSISLL
GVLLPPTMFWSEFEIGVIAEPGTELPHVWPPGGLFYGLERYPWETAPMYI
LVGFVKLLAIACTVQAGFRGGFIFPLFFAGASIGRGLQMVAESVLPE
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mRNA from alignment at F-serratus_M_contig1122:58286..60430+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1122.1122.1 ID=mRNA_F-serratus_M_contig1122.1122.1|Name=mRNA_F-serratus_M_contig1122.1122.1|organism=Fucus serratus male|type=mRNA|length=2145bp|location=Sequence derived from alignment at F-serratus_M_contig1122:58286..60430+ (Fucus serratus male)
CCGAACGTGGTCGACTGCGTACACACCCTCGGCTACGTTCCCATAAAACA GACCGTACCAATGATCGTGGCCAGCTTGTTCAGCATCGCTGCCGGTGGCT CTGTCGGTCCCGAAGCCCCTCTAGTGGCCGTTTCGGCGGCTATTTCGAGC TGGTTGTCTATGAACTTCTTCAAGCACGACATTGTTATGGTTCAGAAGTG CACCATCATCGGCATGTCCGCAGGGCTTGGCGCACTCTTTGGAGTACAGC TCGGCGGTAAGTCGACCGCCCCTAATTCGCACAGATCGGATTCAGAGCGA AGTTCTAATGCGTTCAAAATGTCACTGCGTTCAAGATTTTATCCCCGTGC TTTGGTTGATGCCTCTACATGTGTTCGATATGACGTACTTTTAGATACGA TATTGTCTCCGATCCCATGTGTAAACCATGTATAATTCTTGAAATCCACT CCCGTCCCGAAGAGGGAGAGTCAAGGTCAAAAACAGGTTAGTTAACAGCA TGGCACCAAGTCTTGTCACAGTTGTTCCCGTATCAGGTGATCTCGTGTCC GCGGCACATTAGTTTTCCCGTACTTGACATTTAGTACATGACGTGTGACC TGCGGCATCGTGTGTAATACAATCTGCCTTGCGTGCGAATACTTACAAGT GGCATCGTTGTGTAATGATTACGTGCCAAGCACAGGATCCCTCTTCGCCC TTGAAGTTCTCAACACCATGGGGATGCAGTTCTTCGAGACTGCCGTTTAC TCCATAGGCGCCGGCGGCATCTGCTTGGCTGTGTACCGTGGACTTCAAGG AGAAGCATTCGGAGAGATCTGGGGCTTCGCGCCCGTTGACCTGAGCACCG CCTCCGAGGTTGTGCTTGGAGCTTTGATTGGACTGATCGCAGGCGCTGTC AGCATTTTCTTTCGCGCGTAAGTCGGCGGCCCTTGCTGATTCCATCGATC TACCGATTTGAAGCTGCTAGCCTAAACCGACATGATTGTCCACCATATGA CCCTGTTCGGACATTAATCTGCGTATGAATGATGGGATGCGGCCCCAACT GTACCAATTATACAGGGGCAGAGTTTCGTTCTGAAATCGATAATGGCTCC GAATGAAAGCCATTCTTCGGCTAAGTTTAGTATGTGATCCTTTCACCCCC CAACTCAGTGAGCGCCACCCCAAGCCCAAGAGAGAAATACAAACGGTCGT TCCCAATCCCTACGCCTTCTTGCCATAAACTCTCCTAGCTAATGTCATAT AATATCCGAAACGTCTCTCTGGTCCACCTTTACAGGGTCTTTTGTGGGGT CGCCAAGGGTATCGAACGAATCGGCCTTGGTAATTTCGAGACGACAAACA GACCAATCTTTCTGGCGGCGCTAGGTGGACTTTCCATCTCACTACTGGGT GTCCTCCTGCCGCCTACCATGTTCTGGTCTGAGTTCGAAATTGGGGTGAT CGCCGAGCCGGGCACGGAACTGCCGCACGTATGGCCTCCGGTAGGTTCAG GGCGTTTTTCTTTATAGAATTACTTGCGCACCACACGTCCGCCAGAAAAA CGGCGGTCAAAGCGAGGCCAAAGAGTATTTATCGTGTACAGTAGTACTAG CTACTTCAAGGCGCTGGCCCTTTCCTTCCAATCTTAGGCCGAGCAGCTGT CACGTCTCTTACTTGTAGCTTCCGGTCTGATTGGGTTTTGTGTCAAACTT GAACGTCCCAGGGGGGGCTGTTCTACGGCCTGGAACGATATCCTTGGGAG ACCGCCCCGATGTACATCCTCGTCGGATTTGTGAAGCTGCTGGCGATCGC GTGCACCGTACAAGCTGGTTTCAGAGTAAGTCATTTACTATAGGGTGGAG GCTATGTTAAGTTAGGATCAGGTTGATTGCTCTGTTACAAAAATGAAGGA GGTATATGATGAGTTGAACTCTGCAGTTATAACGCTTTTTTATTTAGGCG GTACGTTCAGTGTACGAGAACTCATACGTCCTGTGCTGCTGCTATTAATA GTGCGACAAGTTCAGGGCTAATACAACAACTTTGTAAACGGCACCTTTCC CACGACGGCAGGGAGGCTTCATCTTCCCGCTTTTCTTCGCGGGAGCTTCA ATAGGTCGCGGTCTCCAGATGGTTGCCGAGTCCGTCCTCCCCGAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1122:58286..60430+

>mRNA_F-serratus_M_contig1122.1122.1 ID=mRNA_F-serratus_M_contig1122.1122.1|Name=mRNA_F-serratus_M_contig1122.1122.1|organism=Fucus serratus male|type=CDS|length=1782bp|location=Sequence derived from alignment at F-serratus_M_contig1122:58286..60430+ (Fucus serratus male)
CCGAACGTGGTCGACTGCGTACACACCCTCGGCTACGTTCCCATAAAACA
GACCGTACCAATGATCGTGGCCAGCTTGTTCAGCATCGCTGCCGGTGGCT
CTGTCGGTCCCGAAGCCCCTCTAGTGGCCGTTTCGGCGGCTATTTCGAGC
TGGTTGTCTATGAACTTCTTCAAGCACGACATTGTTATGGTTCAGAAGTG
CACCATCATCGGCATGTCCGCAGGGCTTGGCGCACTCTTTGGAGTACAGC
TCGGCGCCGAACGTGGTCGACTGCGTACACACCCTCGGCTACGTTCCCAT
AAAACAGACCGTACCAATGATCGTGGCCAGCTTGTTCAGCATCGCTGCCG
GTGGCTCTGTCGGTCCCGAAGCCCCTCTAGTGGCCGTTTCGGCGGCTATT
TCGAGCTGGTTGTCTATGAACTTCTTCAAGCACGACATTGTTATGGTTCA
GAAGTGCACCATCATCGGCATGTCCGCAGGGCTTGGCGCACTCTTTGGAG
TACAGCTCGGCGGATCCCTCTTCGCCCTTGAAGTTCTCAACACCATGGGG
ATGCAGTTCTTCGAGACTGCCGTTTACTCCATAGGCGCCGGCGGCATCTG
CTTGGCTGTGTACCGTGGACTTCAAGGAGAAGCATTCGGAGAGATCTGGG
GCTTCGCGCCCGTTGACCTGAGCACCGCCTCCGAGGTTGTGCTTGGAGCT
TTGATTGGACTGATCGCAGGCGCTGTCAGCATTTTCTTTCGCGCGATCCC
TCTTCGCCCTTGAAGTTCTCAACACCATGGGGATGCAGTTCTTCGAGACT
GCCGTTTACTCCATAGGCGCCGGCGGCATCTGCTTGGCTGTGTACCGTGG
ACTTCAAGGAGAAGCATTCGGAGAGATCTGGGGCTTCGCGCCCGTTGACC
TGAGCACCGCCTCCGAGGTTGTGCTTGGAGCTTTGATTGGACTGATCGCA
GGCGCTGTCAGCATTTTCTTTCGCGCGGTCTTTTGTGGGGTCGCCAAGGG
TATCGAACGAATCGGCCTTGGTAATTTCGAGACGACAAACAGACCAATCT
TTCTGGCGGCGCTAGGTGGACTTTCCATCTCACTACTGGGTGTCCTCCTG
CCGCCTACCATGTTCTGGTCTGAGTTCGAAATTGGGGTGATCGCCGAGCC
GGGCACGGAACTGCCGCACGTATGGCCTCCGGGTCTTTTGTGGGGTCGCC
AAGGGTATCGAACGAATCGGCCTTGGTAATTTCGAGACGACAAACAGACC
AATCTTTCTGGCGGCGCTAGGTGGACTTTCCATCTCACTACTGGGTGTCC
TCCTGCCGCCTACCATGTTCTGGTCTGAGTTCGAAATTGGGGTGATCGCC
GAGCCGGGCACGGAACTGCCGCACGTATGGCCTCCGGGGGGGCTGTTCTA
CGGCCTGGAACGATATCCTTGGGAGACCGCCCCGATGTACATCCTCGTCG
GATTTGTGAAGCTGCTGGCGATCGCGTGCACCGTACAAGCTGGTTTCAGA
GGGGGGCTGTTCTACGGCCTGGAACGATATCCTTGGGAGACCGCCCCGAT
GTACATCCTCGTCGGATTTGTGAAGCTGCTGGCGATCGCGTGCACCGTAC
AAGCTGGTTTCAGAGGAGGCTTCATCTTCCCGCTTTTCTTCGCGGGAGCT
TCAATAGGTCGCGGTCTCCAGATGGTTGCCGAGTCCGTCCTCCCCGAGGG
AGGCTTCATCTTCCCGCTTTTCTTCGCGGGAGCTTCAATAGGTCGCGGTC
TCCAGATGGTTGCCGAGTCCGTCCTCCCCGAG
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