prot_F-serratus_M_contig1121.1118.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1121.1118.1
Unique Nameprot_F-serratus_M_contig1121.1118.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length198
Homology
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BLAST of mRNA_F-serratus_M_contig1121.1118.1 vs. uniprot
Match: A0A6H5JWS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.670e-5
Identity = 33/94 (35.11%), Postives = 53/94 (56.38%), Query Frame = 0 
Query:   41 VPPDTTRSVKASRWSSIAAIVIHTLAL-VTLGLPLWSARSTAQWIASLIGIIMGSILLCFFDRWCYVIAVVLFSVGIFFDIFSALSWVYNGDVI 133
            VPP+  R+V A+R  +I +IVIH ++  +  G  +W         A  I  +MG +LLCF++R+ YVI  + F++   FD+ + L W+   D I
Sbjct:   28 VPPEAPRAVTAARGCAILSIVIHAISFYLGGGFFVWQRN------ACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEI 115
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1121.1118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JWS2_9PHAE1.670e-535.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 81..100
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1121contigF-serratus_M_contig1121:263576..280439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1121.1118.1mRNA_F-serratus_M_contig1121.1118.1Fucus serratus malemRNAF-serratus_M_contig1121 262635..280568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1121.1118.1 ID=prot_F-serratus_M_contig1121.1118.1|Name=mRNA_F-serratus_M_contig1121.1118.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MATPNQIQLAAVPAQPDAQPIAVAGHTTVIVQQHGGCCCSVPPDTTRSVK
ASRWSSIAAIVIHTLALVTLGLPLWSARSTAQWIASLIGIIMGSILLCFF
DRWCYVIAVVLFSVGIFFDIFSALSWVYNGDVIGLALLPAFGAVAFATGA
TAASVAVCNWHESAAPDARVTQNERVQIVHRPPSPSINATAGQHDYS*
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