prot_F-serratus_M_contig1121.1117.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1121.1117.1
Unique Name	prot_F-serratus_M_contig1121.1117.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	210

Homology

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BLAST of mRNA_F-serratus_M_contig1121.1117.1 vs. uniprot
Match: D7G5D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D4_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.870e-30
Identity = 84/213 (39.44%), Postives = 114/213 (53.52%), Query Frame = 0

Query:   17 VAQPMTYAVAQPGQTAAVVQQQGC-CSVPPGTTQSVKTSRWSSIAIIVIHALALFVLGFFNWSQWISSLMGIIMGSILLCVFTRCCYITATVLFSVGIIFDIIAMILWFA--------------NDAAALAILPA-LGAVSFLIGAIATGMAVCNWHKSGAPDAT---VEQQGRIEIVQHAPTPSINATAVQPNY-SHPSASERPPPAYSGSV 209
            + QP T  +A P  T  V  Q GC C+VPP  +  V+ SR ++IA IV+HA+AL   G+  W  W++SL+  IMG ILLC F +C YI A  LF +G IFD+++M  W A              + A     LPA LGA+SF++  +   +A+CNW KSGAPDA    +    ++    H      +A   QP Y  H  A    PP YSG+V
Sbjct:    3 IQQPATV-IAVPPTTTVVHAQNGCSCTVPPNVSGHVRGSRGATIATIVVHAIALLAFGWILWGIWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVSMAAWIAYATSDNYYYNGSELSSAVGWFALPAALGALSFIVAIVFIFLAICNWEKSGAPDAMGPPMPGGAQVMAPNHGVQMKHHAPQAQPQYVGHAQA----PPPYSGNV 210

[Close]

BLAST of mRNA_F-serratus_M_contig1121.1117.1 vs. uniprot
Match: A0A6H5K1J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J6_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 8.810e-25
Identity = 72/175 (41.14%), Postives = 93/175 (53.14%), Query Frame = 0

Query:   54 SRWSSIAIIVIHALALFVLGFFNWSQWISSLMGIIMGSILLCVFTRCCYITATVLFSVGIIFDIIAMILWFA--------------NDAAALAILPA-LGAVSFLIGAIATGMAVCNWHKSGAPDAT---VEQQGRIEIVQHAPTPSINATAVQP-NYSHPSASERPPPAYSGSV 209
            SR ++IA IV+HA+AL   G+  WS W++SL+  IMG ILLC F +C YI A  LF +G IFD++AM  W A                A     LPA LGA+SF+I  +   +A+CNW KSGAPDA    +    ++    H      +A   QP N  H  A    PP YSG V
Sbjct:   28 SRGATIASIVVHAIALLAFGWIAWSVWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSGAPDAMGPPMAGGAQVTAPNHGVQMKHHAPQAQPQNVGHTQA----PPPYSGDV 198

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1121.1117.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1121.1117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G5D4_ECTSI	1.870e-30	39.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K1J6_9PHAE	8.810e-25	41.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 126..130
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 155..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..98
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..55
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 75..79
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 105..125
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 99..104
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 131..154
None	No IPR available	TMHMM	TMhelix		coord: 102..124
None	No IPR available	TMHMM	TMhelix		coord: 80..97
None	No IPR available	TMHMM	TMhelix		coord: 128..150
None	No IPR available	TMHMM	TMhelix		coord: 56..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1121	contig	F-serratus_M_contig1121:22238..51316 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1121.1117.1	mRNA_F-serratus_M_contig1121.1117.1	Fucus serratus male	mRNA	F-serratus_M_contig1121 21448..51481 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1121.1117.1 ID=prot_F-serratus_M_contig1121.1117.1|Name=mRNA_F-serratus_M_contig1121.1117.1|organism=Fucus serratus male|type=polypeptide|length=210bp
MAILNQPQSTTASAQPVAQPMTYAVAQPGQTAAVVQQQGCCSVPPGTTQS
VKTSRWSSIAIIVIHALALFVLGFFNWSQWISSLMGIIMGSILLCVFTRC
CYITATVLFSVGIIFDIIAMILWFANDAAALAILPALGAVSFLIGAIATG
MAVCNWHKSGAPDATVEQQGRIEIVQHAPTPSINATAVQPNYSHPSASER
PPPAYSGSV*