prot_F-serratus_M_contig112.1111.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig112.1111.1
Unique Nameprot_F-serratus_M_contig112.1111.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length219
Homology
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: D7FMQ4_ECTSI (Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ4_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 1.340e-137
Identity = 205/217 (94.47%), Postives = 209/217 (96.31%), Query Frame = 0
Query:    3 SQTGENGTTTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSN-ANLIDIKLSAAPPTEEAAKSCPC 218
            +Q GENG   PAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAE IMFIETSAKGGYNIKALFRKLATALPGMETAP TSN ANLIDIKLSAAPPTE+AA++C C
Sbjct:    2 AQAGENGGA-PAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNANLIDIKLSAAPPTEDAARTCAC 217          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A836CM24_9STRA (Rab6, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM24_9STRA)

HSP 1 Score: 346 bits (887), Expect = 5.570e-119
Identity = 173/204 (84.80%), Postives = 190/204 (93.14%), Query Frame = 0
Query:   15 VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAPPTEEAAKSCPC 218
            +PQ+APLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLN+S+WI+DVR ERGN+VV+MLVGNKTDL +RRQVSVEEGED+AK E +M IETSAK GYNIK LFRKLATALPGME+AP T+++NLIDIKLSA PP E  ++ C C
Sbjct:   16 IPQVAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNSSEWIKDVRAERGNEVVIMLVGNKTDLADRRQVSVEEGEDKAKKEGVMHIETSAKAGYNIKPLFRKLATALPGMESAPSTASSNLIDIKLSAQPPEEAPSRQCYC 219          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A6V1RZC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZC8_HETAK)

HSP 1 Score: 346 bits (887), Expect = 1.340e-118
Identity = 179/221 (81.00%), Postives = 193/221 (87.33%), Query Frame = 0
Query:    2 ASQTGENGTTTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAPPTE----EAAKSCPC 218
            AS      + TP VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVR+ERGNDVV+MLVGNKTDL +RRQVS EEG DRA+AE ++F E SAK G N+K +FR+LA ALPGME+AP TSNANLIDIKL A+P  +    E A+SC C
Sbjct:   24 ASDMSRAASMTPGVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRSERGNDVVIMLVGNKTDLADRRQVSAEEGGDRAQAEGVIFAEASAKSGANVKGVFRQLAAALPGMESAPTTSNANLIDIKLQASPVVDLADNEDARSCGC 244          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A7S2UZT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZT5_9STRA)

HSP 1 Score: 344 bits (882), Expect = 3.970e-118
Identity = 177/211 (83.89%), Postives = 189/211 (89.57%), Query Frame = 0
Query:   12 TPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGME-TAPVTSNANLIDIKLSAAPPTEEA---AKSCPC 218
            +P VPQI PLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMY+ DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKW+EDVRNERGNDVV+MLVGNKTDL +RRQVSVEEGE+RAK+E IMFIETSAK GYN+KALF KLATALPGM+ T P+  N N+IDIKLSAAP   E     + C C
Sbjct:   15 SPGVPQITPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYMPDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWVEDVRNERGNDVVIMLVGNKTDLSDRRQVSVEEGEERAKSEQIMFIETSAKAGYNVKALFNKLATALPGMDATQPLAPNTNMIDIKLSAAPANLEENDNVRRCAC 225          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: K3WVM7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM7_GLOUD)

HSP 1 Score: 341 bits (874), Expect = 9.320e-117
Identity = 176/225 (78.22%), Postives = 194/225 (86.22%), Query Frame = 0
Query:    2 ASQTGENG-------TTTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAP-PTEEAAKSCPC 218
            A++T E+G         T +VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ ERRQVS+EEG D+AK EN+MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIKL+AAP P E  A+SC C
Sbjct:   11 AAETQESGGADAGVVANTVSVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISERRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTAISGDSNLIDIKLTAAPAPKEATAESCNC 235          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A5D6XJX8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJX8_9STRA)

HSP 1 Score: 337 bits (865), Expect = 2.690e-115
Identity = 170/206 (82.52%), Postives = 185/206 (89.81%), Query Frame = 0
Query:   14 AVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAP-PTEEAAKSCPC 218
            +VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK EN+MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIKL+AAP P E AA SC C
Sbjct:   36 SVPQIAPLAKYKLVFLGDQGVGKTSVITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTAISGDSNLIDIKLTAAPAPKETAADSCGC 241          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A0P1AX93_PLAHL (Rab family gtpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX93_PLAHL)

HSP 1 Score: 337 bits (863), Expect = 5.820e-115
Identity = 169/205 (82.44%), Postives = 185/205 (90.24%), Query Frame = 0
Query:   15 VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAPPTEE-AAKSCPC 218
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK EN+M+IETSAK GYNIKALFRKLAT LPGME   +T ++NLIDIKL+AAPP +E  A+ C C
Sbjct:   39 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVVMLVGNKTDISDRRQVSIEEGSDKAKEENVMYIETSAKAGYNIKALFRKLATVLPGMENTMITGDSNLIDIKLTAAPPPKEHTAEQCNC 243          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: W2LJW2_PHYPR (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2LJW2_PHYPR)

HSP 1 Score: 336 bits (862), Expect = 1.710e-114
Identity = 169/205 (82.44%), Postives = 185/205 (90.24%), Query Frame = 0
Query:   15 VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAPPTEE-AAKSCPC 218
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK EN+MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIKL+AAPP +E  A+ C C
Sbjct:   60 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNLIDIKLTAAPPPKENTAEQCNC 264          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A8K1CRQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRQ3_PYTOL)

HSP 1 Score: 335 bits (859), Expect = 2.130e-114
Identity = 173/220 (78.64%), Postives = 190/220 (86.36%), Query Frame = 0
Query:    4 QTGENGTTTPA----VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAP-PTEEAAKSCPC 218
            Q+ E+   TP     VPQIAPLAKYKLVFLGDQ VGKTSIITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK EN+MFIETSAK G+NIKALFRKLAT LPGME   ++ ++NLIDIKL+AAP P E  A+SC C
Sbjct:   21 QSQEDPVLTPGGSVTVPQIAPLAKYKLVFLGDQGVGKTSIITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGFNIKALFRKLATVLPGMENTAISGDSNLIDIKLTAAPAPKETQAESCNC 240          
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 334 bits (857), Expect = 2.370e-114
Identity = 171/208 (82.21%), Postives = 188/208 (90.38%), Query Frame = 0
Query:    1 MASQTGENGTTTPA-VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKLSAAP 207
            MA+ +     T+PA +PQI  LAKYKLVFLGDQ VGKTSIITRFMYD F+KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVRNERGNDV++MLVGNKTDL +RRQVS EEGED+AK +NIMFIETSAK G+NIK LFRKLATALPGME+A    +ANLIDIKL+AAP
Sbjct:    1 MAATSPVKSPTSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKLAAAP 208          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig112.1111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ4_ECTSI1.340e-13794.47Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CM24_9STRA5.570e-11984.80Rab6, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RZC8_HETAK1.340e-11881.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZT5_9STRA3.970e-11883.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WVM7_GLOUD9.320e-11778.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XJX8_9STRA2.690e-11582.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AX93_PLAHL5.820e-11582.44Rab family gtpase n=1 Tax=Plasmopara halstedii Tax... [more]
W2LJW2_PHYPR1.710e-11482.44Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]
A0A8K1CRQ3_PYTOL2.130e-11478.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D1C8_9STRA2.370e-11482.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 162..184
score: 36.91
coord: 127..140
score: 51.95
coord: 65..87
score: 48.05
coord: 24..45
score: 41.61
coord: 47..63
score: 33.13
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 29..214
e-value: 8.6E-11
score: 51.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 24..187
e-value: 2.5E-85
score: 299.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 21..187
e-value: 5.3E-34
score: 129.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 26..186
e-value: 1.1E-12
score: 42.4
NoneNo IPR availableGENE3D3.40.50.300coord: 17..188
e-value: 6.1E-64
score: 216.7
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 19..205
NoneNo IPR availablePANTHERPTHR24073:SF1036coord: 19..205
NoneNo IPR availablePROSITEPS51419RABcoord: 18..216
score: 31.655
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 23..179
e-value: 3.0E-29
score: 99.9
IPR001806Small GTPasePFAMPF00071Rascoord: 25..183
e-value: 1.1E-58
score: 197.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig112contigF-serratus_M_contig112:690482..712836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig112.1111.1mRNA_F-serratus_M_contig112.1111.1Fucus serratus malemRNAF-serratus_M_contig112 690160..712906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig112.1111.1 ID=prot_F-serratus_M_contig112.1111.1|Name=mRNA_F-serratus_M_contig112.1111.1|organism=Fucus serratus male|type=polypeptide|length=219bp
MASQTGENGTTTPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDK
NYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV
IVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEE
GEDRAKAENIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLID
IKLSAAPPTEEAAKSCPC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase