prot_F-serratus_M_contig1118.1091.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1118.1091.1
Unique Nameprot_F-serratus_M_contig1118.1091.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length292
Homology
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA)

HSP 1 Score: 73.6 bits (179), Expect = 7.320e-11
Identity = 50/154 (32.47%), Postives = 79/154 (51.30%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGA-AVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK GH++ +C++ KK  +K  A  +E        C +           F E     MVG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S
Sbjct:   28 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDNLCAM-----------FTECN---MVGNPRA-----WWMDSGATLHVCASKELFSTYAPAQAEETIYMANSTTAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 158          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2VDA6_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VDA6_CAPBA)

HSP 1 Score: 73.2 bits (178), Expect = 9.880e-11
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK GH++ +C++ KK  +K  A +               +E  ++K + ++ A      MVG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S
Sbjct:  263 KFKGKCFNCGKIGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATHHVCESKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 393          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2V5Q5_CAPBA (Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V5Q5_CAPBA)

HSP 1 Score: 72.0 bits (175), Expect = 2.290e-10
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK GH++ +C++ KK  +K  A +               +E  ++K + ++ A      MVG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S
Sbjct:  704 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 834          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2W247_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W247_CAPBA)

HSP 1 Score: 72.0 bits (175), Expect = 2.510e-10
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK GH++ +C++ KK  +K  A +               +E  ++K + ++ A      MVG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S
Sbjct:  739 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 869          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: UPI001C9A539E (laminin subunit alpha-1 n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A539E)

HSP 1 Score: 66.6 bits (161), Expect = 1.620e-8
Identity = 69/313 (22.04%), Postives = 125/313 (39.94%), Query Frame = 0
Query:    1 AWSNLELHYRAKGTREIIRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRKCVIIVSGLSADFEMECRMLENNPDGLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENGKN---------------------RRLCNKFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVSTVKA 292
            AW  L++ + ++G      L  E+     +PG+   +++ E  + A  +   G +   EL   ++++S L  +FE     +E+  D      I  +     + L+ + ++ +A    R   +  REN  +                     +    KF GKCFSCG+ GH+ +EC+S          ++EK        Y+  ++  +A+   P  R++             W  DSGAT HM + R                 AD   +   G G + ++      + K ++++D  YVP L  NL+S  +A
Sbjct:   84 AWDKLKIVFESRGPVRKATLCKELLRMERKPGTTIVQYLNEFSEKADQVREAGIQISDELLSIMLLIS-LPREFENFSIAIESRDD------IPTL-----DNLMAKIKEEEARQNERDVKSGERENKSDALHVKDNFDRKKYTRAYAKDYKAKPRKFNGKCFSCGRYGHKTIECRSK---------SIEKRENS---YYLSEAMTAIAYNTEPVKRSSV------------WCLDSGATRHMCNERNKFETVNNDEQYKVYTAAD-QWVESTGIGNVNLNAKTGRYSPKSIKLEDTLYVPSLRNNLLSVSRA 359          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: F0W6E8_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6E8_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.260e-8
Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   39 MMEVDKLAGDLHRLGDKSVTELRKCVIIVSGLSADFEMECRMLENNPDGLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENGKNRRLCNKFEGKCFSCGKKGHRAVECKS 156
            MM+ DKL  ++  + D  + +    VI++  L  DF+   R+LE+ P G++    +  +  ++ R+  ++    AL A+RG I+  +       L  +F GKCF CGK+GHR  EC++
Sbjct:    4 MMKFDKLTMEIAAMED-GLNDQEMIVILLGSLPVDFDPIVRILESMP-GIDLISAKGTLQREWERMQNRESSEVALQATRGRISKKKYQRHPGTLGEEFNGKCFQCGKRGHRKNECRT 119          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G3BPT2_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BPT2_CAPCH)

HSP 1 Score: 65.9 bits (159), Expect = 2.460e-8
Identity = 44/153 (28.76%), Postives = 78/153 (50.98%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK GH++++C++ KK  +K               Y     E  ++K + ++ A         D +E W  DSG T H+   +   S++  A     I +A+  T  V+G G++ + +     + K++ +++V Y+P L RNL+S
Sbjct:  401 KFKGKCFNCGKIGHKSMDCRAPKKGKKK---------------YQANMFE--SNKEYDDLCAMFSEYNLVGDPREWW-MDSGVTRHVCANKELFSSFAPAQVEEMIYMANSVTAKVEGTGKVCLKMT----SGKVLTLNNVLYIPELRRNLIS 531          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A438CTG7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CTG7_VITVI)

HSP 1 Score: 65.9 bits (159), Expect = 2.580e-8
Identity = 40/155 (25.81%), Postives = 74/155 (47.74%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTAR--SDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK+GH++V+C+  KK   K    ++                    K+  ++   A+V          +EW  D+GAT H+   +   S ++    G  + + +  T  + G G++ + +     + K + + +V YVP++ +NLVS
Sbjct:  275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDD-----------------ITKNVSDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPKIRKNLVS 408          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A438E115_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E115_VITVI)

HSP 1 Score: 65.1 bits (157), Expect = 4.140e-8
Identity = 40/155 (25.81%), Postives = 73/155 (47.10%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTAR--SDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK+GH++V+C+  KK   K    ++                    K+  ++   A+V          +EW  D+GAT H+   +   S ++    G  + + +  T  + G G++ + +     + K + + +V YVP + +NLVS
Sbjct:  275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDD-----------------ITKNVSDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVS 408          
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2V8S1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V8S1_CAPBA)

HSP 1 Score: 65.1 bits (157), Expect = 4.420e-8
Identity = 46/157 (29.30%), Postives = 81/157 (51.59%), Query Frame = 0
Query:  136 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 288
            KF+GKCF+CGK GH++ +C++ KK  +K  A +               +E  ++K + ++ A      MVG  R+     W  DSGAT ++  ++   S Y  A    +I +A+  T  V+  G++ + +     + K++ +++  YVP L RNL+S
Sbjct:   30 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRYVCASKEFFSTYAPAQAEETIYMANSATAKVEEIGKVCLKMT----SRKVLTLNNELYVPELRRNLIS 160          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G2X5Y1_CAPBA7.320e-1132.47Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2VDA6_CAPBA9.880e-1131.21Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2V5Q5_CAPBA2.290e-1031.21Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum T... [more]
A0A2G2W247_CAPBA2.510e-1031.21Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
UPI001C9A539E1.620e-822.04laminin subunit alpha-1 n=1 Tax=Colletes gigas Tax... [more]
F0W6E8_9STRA2.260e-831.36Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
A0A2G3BPT2_CAPCH2.460e-828.76Uncharacterized protein n=1 Tax=Capsicum chinense ... [more]
A0A438CTG7_VITVI2.580e-825.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E115_VITVI4.140e-825.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G2V8S1_CAPBA4.420e-829.30Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 140..156
e-value: 0.003
score: 26.8
coord: 177..191
e-value: 43.0
score: 1.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 139..156
e-value: 9.6E-5
score: 22.3
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 140..156
score: 9.916
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 1..89
e-value: 1.4E-6
score: 28.0
NoneNo IPR availableGENE3D4.10.60.10coord: 116..195
e-value: 2.1E-7
score: 32.5
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 138..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1118contigF-serratus_M_contig1118:1177..2148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1118.1091.1mRNA_F-serratus_M_contig1118.1091.1Fucus serratus malemRNAF-serratus_M_contig1118 1177..2148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1118.1091.1 ID=prot_F-serratus_M_contig1118.1091.1|Name=mRNA_F-serratus_M_contig1118.1091.1|organism=Fucus serratus male|type=polypeptide|length=292bp
AWSNLELHYRAKGTREIIRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLH
RLGDKSVTELRKCVIIVSGLSADFEMECRMLENNPDGLNRGEIERVVGNQ
YNRLLRQQQDSKALSASRGTITANRENGKNRRLCNKFEGKCFSCGKKGHR
AVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAM
VGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLP
VDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVSTVKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf