mRNA_F-serratus_M_contig1118.1091.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA) HSP 1 Score: 73.6 bits (179), Expect = 7.320e-11 Identity = 50/154 (32.47%), Postives = 79/154 (51.30%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGA-AVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK GH++ +C++ KK +K A +E C + F E MVG R+ W DSGAT H+ ++ S Y A +I +A+ T V+G G++ + + + K++ +++V YVP L RNL+S
Sbjct: 28 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDNLCAM-----------FTECN---MVGNPRA-----WWMDSGATLHVCASKELFSTYAPAQAEETIYMANSTTAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 158
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2VDA6_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VDA6_CAPBA) HSP 1 Score: 73.2 bits (178), Expect = 9.880e-11 Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK GH++ +C++ KK +K A + +E ++K + ++ A MVG R+ W DSGAT H+ ++ S Y A +I +A+ T V+G G++ + + + K++ +++V YVP L RNL+S
Sbjct: 263 KFKGKCFNCGKIGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATHHVCESKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 393
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2V5Q5_CAPBA (Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V5Q5_CAPBA) HSP 1 Score: 72.0 bits (175), Expect = 2.290e-10 Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK GH++ +C++ KK +K A + +E ++K + ++ A MVG R+ W DSGAT H+ ++ S Y A +I +A+ T V+G G++ + + + K++ +++V YVP L RNL+S
Sbjct: 704 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 834
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2W247_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W247_CAPBA) HSP 1 Score: 72.0 bits (175), Expect = 2.510e-10 Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK GH++ +C++ KK +K A + +E ++K + ++ A MVG R+ W DSGAT H+ ++ S Y A +I +A+ T V+G G++ + + + K++ +++V YVP L RNL+S
Sbjct: 739 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 869
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: UPI001C9A539E (laminin subunit alpha-1 n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A539E) HSP 1 Score: 66.6 bits (161), Expect = 1.620e-8 Identity = 69/313 (22.04%), Postives = 125/313 (39.94%), Query Frame = 1
Query: 1 AWSNLELHYRAKGTREIIRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRKCVIIVSGLSADFEMECRMLENNPDGLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENGKN---------------------RRLCNKFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVSTVKA 876
AW L++ + ++G L E+ +PG+ +++ E + A + G + EL ++++S L +FE +E+ D I + + L+ + ++ +A R + REN + + KF GKCFSCG+ GH+ +EC+S ++EK Y+ ++ +A+ P R++ W DSGAT HM + R AD + G G + ++ + K ++++D YVP L NL+S +A
Sbjct: 84 AWDKLKIVFESRGPVRKATLCKELLRMERKPGTTIVQYLNEFSEKADQVREAGIQISDELLSIMLLIS-LPREFENFSIAIESRDD------IPTL-----DNLMAKIKEEEARQNERDVKSGERENKSDALHVKDNFDRKKYTRAYAKDYKAKPRKFNGKCFSCGRYGHKTIECRSK---------SIEKRENS---YYLSEAMTAIAYNTEPVKRSSV------------WCLDSGATRHMCNERNKFETVNNDEQYKVYTAAD-QWVESTGIGNVNLNAKTGRYSPKSIKLEDTLYVPSLRNNLLSVSRA 359
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: F0W6E8_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6E8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.260e-8 Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 115 MMEVDKLAGDLHRLGDKSVTELRKCVIIVSGLSADFEMECRMLENNPDGLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENGKNRRLCNKFEGKCFSCGKKGHRAVECKS 468
MM+ DKL ++ + D + + VI++ L DF+ R+LE+ P G++ + + ++ R+ ++ AL A+RG I+ + L +F GKCF CGK+GHR EC++
Sbjct: 4 MMKFDKLTMEIAAMED-GLNDQEMIVILLGSLPVDFDPIVRILESMP-GIDLISAKGTLQREWERMQNRESSEVALQATRGRISKKKYQRHPGTLGEEFNGKCFQCGKRGHRKNECRT 119
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G3BPT2_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BPT2_CAPCH) HSP 1 Score: 65.9 bits (159), Expect = 2.460e-8 Identity = 44/153 (28.76%), Postives = 78/153 (50.98%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK GH++++C++ KK +K Y E ++K + ++ A D +E W DSG T H+ + S++ A I +A+ T V+G G++ + + + K++ +++V Y+P L RNL+S
Sbjct: 401 KFKGKCFNCGKIGHKSMDCRAPKKGKKK---------------YQANMFE--SNKEYDDLCAMFSEYNLVGDPREWW-MDSGVTRHVCANKELFSSFAPAQVEEMIYMANSVTAKVEGTGKVCLKMT----SGKVLTLNNVLYIPELRRNLIS 531
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A438CTG7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CTG7_VITVI) HSP 1 Score: 65.9 bits (159), Expect = 2.580e-8 Identity = 40/155 (25.81%), Postives = 74/155 (47.74%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTAR--SDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK+GH++V+C+ KK K ++ K+ ++ A+V +EW D+GAT H+ + S ++ G + + + T + G G++ + + + K + + +V YVP++ +NLVS
Sbjct: 275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDD-----------------ITKNVSDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPKIRKNLVS 408
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A438E115_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E115_VITVI) HSP 1 Score: 65.1 bits (157), Expect = 4.140e-8 Identity = 40/155 (25.81%), Postives = 73/155 (47.10%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRAAAMVGTAR--SDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK+GH++V+C+ KK K ++ K+ ++ A+V +EW D+GAT H+ + S ++ G + + + T + G G++ + + + K + + +V YVP + +NLVS
Sbjct: 275 KFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDD-----------------ITKNVSDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMT----SGKELTLTNVLYVPEIRKNLVS 408
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Match: A0A2G2V8S1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V8S1_CAPBA) HSP 1 Score: 65.1 bits (157), Expect = 4.420e-8 Identity = 46/157 (29.30%), Postives = 81/157 (51.59%), Query Frame = 1
Query: 406 KFEGKCFSCGKKGHRAVECKSTKKKNEKPGAAVEKEGGGGGRCYVCGSVEHLAHKHFPEVRA----AAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKIADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPRLSRNLVS 864
KF+GKCF+CGK GH++ +C++ KK +K A + +E ++K + ++ A MVG R+ W DSGAT ++ ++ S Y A +I +A+ T V+ G++ + + + K++ +++ YVP L RNL+S
Sbjct: 30 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANL---------------IE--SNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRYVCASKEFFSTYAPAQAEETIYMANSATAKVEEIGKVCLKMT----SRKVLTLNNELYVPELRRNLIS 160 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1118.1091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1118.1091.1 >prot_F-serratus_M_contig1118.1091.1 ID=prot_F-serratus_M_contig1118.1091.1|Name=mRNA_F-serratus_M_contig1118.1091.1|organism=Fucus serratus male|type=polypeptide|length=292bp AWSNLELHYRAKGTREIIRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLHback to top mRNA from alignment at F-serratus_M_contig1118:1177..2148+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1118.1091.1 ID=mRNA_F-serratus_M_contig1118.1091.1|Name=mRNA_F-serratus_M_contig1118.1091.1|organism=Fucus serratus male|type=mRNA|length=972bp|location=Sequence derived from alignment at F-serratus_M_contig1118:1177..2148+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1118:1177..2148+ >mRNA_F-serratus_M_contig1118.1091.1 ID=mRNA_F-serratus_M_contig1118.1091.1|Name=mRNA_F-serratus_M_contig1118.1091.1|organism=Fucus serratus male|type=CDS|length=1752bp|location=Sequence derived from alignment at F-serratus_M_contig1118:1177..2148+ (Fucus serratus male)back to top |