prot_F-serratus_M_contig1111.1057.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1111.1057.1
Unique Nameprot_F-serratus_M_contig1111.1057.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1055
Homology
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BLAST of mRNA_F-serratus_M_contig1111.1057.1 vs. uniprot
Match: D8LDV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV3_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.650e-10
Identity = 45/107 (42.06%), Postives = 58/107 (54.21%), Query Frame = 0 
Query:  215 VTRDPELARNLVPAVVCSGTTLLKPLLAFTSEVDAQGSQGCNPNLIGRMEGLPTMLTIPTVLEILANLSIADPAGVAAWLTNCTPG-WSPWGALKGLEVELNNRHEK 320
            +TR  ELAR+LVP  V +G  LL P+LA                  G ++        P VLE+L NLS ADP  +  WL +C+P   SP GALKGL++ELN+  EK
Sbjct:    1 MTRVEELARSLVPGAVSTGVALLMPILARKPHSTVAA---------GPVDSSMASSAFP-VLELLVNLSCADPHAIYNWLASCSPDDGSPGGALKGLKIELNSGVEK 97
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1111.1057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDV3_ECTSI1.650e-1042.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 444..730
e-value: 6.1E-10
score: 40.3
IPR038739Armadillo-type fold containing protein ARMC8/Vid28PANTHERPTHR15651FAMILY NOT NAMEDcoord: 518..676
coord: 46..338
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..672
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 694..1054
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 673..693
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 45..341
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 517..940

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1111contigF-serratus_M_contig1111:80149..100204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1111.1057.1mRNA_F-serratus_M_contig1111.1057.1Fucus serratus malemRNAF-serratus_M_contig1111 80026..101586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1111.1057.1 ID=prot_F-serratus_M_contig1111.1057.1|Name=mRNA_F-serratus_M_contig1111.1057.1|organism=Fucus serratus male|type=polypeptide|length=1055bp
MESILRVVCPPCSQPSLAAHRGHTDGAEDTGRIDTTASKPGSIFSSHLEQ
RLKVVHDLKHALVGNEGAKVEAMRLGIVEELLSFLDAAAADGTAYDSSLL
QAMGLVSILTTSPAAPDALIPCSSKLLEHVREGLGYHGDRTTATILRMLS
AMHAILFRREGWFLSTKAPTARAETNITPLLKEISLQVLQGITNNHSHQW
SPGLRNLGAEALATVTRDPELARNLVPAVVCSGTTLLKPLLAFTSEVDAQ
GSQGCNPNLIGRMEGLPTMLTIPTVLEILANLSIADPAGVAAWLTNCTPG
WSPWGALKGLEVELNNRHEKVRILAGLVLINCFKGKRDGCATSGAARTAG
VHPPTTCKKSAWGDFSPSAPHALDAVIAHRVLPLFFRTLRSWAELPAAAA
ATTSCTTAASCSRAALSFSAVCYVGHATAVVEAVGVAIKLEPWQRQGEAV
AYGAVDSLVAFLRRARFAAAAVVTPSRGGSEGCGDSEEASPLVGANGIAP
PAKSGEGEVGVLVITMWAALEALATVCAICESARGRVVTLGFHCDVVSWL
DEQVGSTAVSSGDGVQLEALELFRNLGRSCVSCSAIVAAGAFESLIGVVR
SMEVIADGEFERLALAAAGLTNMALEHEVVKEAISRSECLRTICKTAVNT
SAPEHVRTACVSLLCSTCFLAPLHVRVGVSFFLGGVGGMLALLDAPREND
LLLKSLKTLRNLLRAVPLWALHRMEGQTSQGDSTGGGDGAGPTAARSAEE
SFPMGGALFGRAEQAQALAATGVAQEIIPRDAMPSTWEPVQMDWRMWRQW
RDRHPGEAREGGRSAAGRHLWGELETSPPRDSFHGSIGNRQNDRPQSMED
DFQPGRRFHRSATERRMGPWMSRGRGTDWGLTKLVEAILSTLEGAPAGEG
CDETSCAALRLLLTLATAHDSQLAALQTPRVLEVIKPHLLPGGAYERDDH
GHFQVFSPLPLAPLPSLGLASPYCVIADTIARSLLAQLVPGQADSNIATM
LAAFAATGASASSAEGAGANENARGRGQSTRSASAAWCPRMELNQPGRER
TGRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR038739ARMC8/Vid28
IPR016024ARM-type_fold