prot_F-serratus_M_contig111.1047.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig111.1047.1
Unique Nameprot_F-serratus_M_contig111.1047.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length588
Homology
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BLAST of mRNA_F-serratus_M_contig111.1047.1 vs. uniprot
Match: A0A6H5KUN9_9PHAE (SAGA-associated factor 11 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN9_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 3.020e-60
Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0 
Query:   56 PSRKRPRTVEDWLVHPPDGSEPTDLRKEAEAIFSAFEQSLCRDVVFE--LHRELHTGVLTNERLWAERLHPPPKPIPDGDVYGRIPPRDPSTSITCPSCGRTVGAARYAPHLDKCALGSSRGRASRPARSS 184
            PS KRPR VEDWLVHPPDGS+P DLR+EAEAI+SAFE SLCRDVVFE  LHRELHTGVLT ERLWAE  +PPPK +  GDVYGRIPPR+PSTSITCPSC R VGAARYAPHLDKCALGSSRGRASR ARSS
Sbjct:   77 PSLKRPREVEDWLVHPPDGSDPIDLRQEAEAIYSAFELSLCRDVVFEASLHRELHTGVLTKERLWAESNNPPPKSVAGGDVYGRIPPREPSTSITCPSCNRAVGAARYAPHLDKCALGSSRGRASRSARSS 207
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BLAST of mRNA_F-serratus_M_contig111.1047.1 vs. uniprot
Match: D7FXW5_ECTSI (SAGA-associated factor 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW5_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.190e-51
Identity = 92/114 (80.70%), Postives = 99/114 (86.84%), Query Frame = 0 
Query:   76 EPTDLRKEAEAIFSAFEQSLCRDVVFELHRELHTGVLTNERLWAERLHPPPKPIPDGDVYGRIPPRDPSTSITCPSCGRTVGAARYAPHLDKCALGSSRGRASRPARSSVRARG 189
            +P DLR+EA+ I+SAFE SLCRDVVFELHRELHTGVLT ERLWAE  +PPPK +  GDVYGRIPPR+PSTSITCPSC R VGAARYAPHLDKCALGSSRGRASR ARSS  A G
Sbjct:   18 DPIDLRQEADTIYSAFELSLCRDVVFELHRELHTGVLTKERLWAEHNNPPPKSVAGGDVYGRIPPREPSTSITCPSCNRAVGAARYAPHLDKCALGSSRGRASRSARSSALAVG 131
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BLAST of mRNA_F-serratus_M_contig111.1047.1 vs. uniprot
Match: A0A7S2WKT2_9STRA (SAGA-associated factor 11 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WKT2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.580e-6
Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 0 
Query:  133 DVYGRIPPRDPSTSITCPSCGRTVGAARYAPHLDKC-ALGSSRGRASRPARSSVR 186
            D++GRIP ++P T++ C  CG+ V A R+APHLDKC  LG+SR  +S   RS+ +
Sbjct:  125 DIWGRIPSKEPKTTVKCKKCGKNVSAIRFAPHLDKCMGLGTSRRNSSSSVRSAAK 179
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig111.1047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KUN9_9PHAE3.020e-6083.97SAGA-associated factor 11 (Fragment) n=1 Tax=Ectoc... [more]
D7FXW5_ECTSI1.190e-5180.70SAGA-associated factor 11 n=1 Tax=Ectocarpus silic... [more]
A0A7S2WKT2_9STRA2.580e-649.09SAGA-associated factor 11 n=1 Tax=Eucampia antarct... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013246SAGA complex, Sgf11 subunitPFAMPF08209Sgf11coord: 145..168
e-value: 1.3E-10
score: 40.6
NoneNo IPR availablePANTHERPTHR46367FAMILY NOT NAMEDcoord: 82..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig111contigF-serratus_M_contig111:715768..729402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig111.1047.1mRNA_F-serratus_M_contig111.1047.1Fucus serratus malemRNAF-serratus_M_contig111 714741..729576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig111.1047.1 ID=prot_F-serratus_M_contig111.1047.1|Name=mRNA_F-serratus_M_contig111.1047.1|organism=Fucus serratus male|type=polypeptide|length=588bp
MERLDVSNESEACSGRKRKVPDVGVSQATKPGSLEGFSPSKGGDRVLNIS
SCDSSPSRKRPRTVEDWLVHPPDGSEPTDLRKEAEAIFSAFEQSLCRDVV
FELHRELHTGVLTNERLWAERLHPPPKPIPDGDVYGRIPPRDPSTSITCP
SCGRTVGAARYAPHLDKCALGSSRGRASRPARSSVRARGSISKGEEVGAL
APRATATPPQQPKPAKSVENPTPAVKPAAKPAAKPATKPTTKPANKPSTK
AANKPSTKAANKPSTKAADKPSTKAANKPSTKPANKPSTKPANEPPTKPA
NEPSTKPANEPLIDPADKPIIRLGCRPTTLTAPKLSTTRPPSRSGSRPPR
QPAAPRLPQRASRVTPSPAPPVVHAPMLEKKREPLHILIKLVDGSPVQTY
HRVLLTAPQPQSPIQSKSTSSRSFDGPGDRAGSRETHPPARAAALGQNVS
CKKMRESSPAEFSRDSRSKDSRRPSLGPEPGVSVGSRRGSVDGGCATPEG
GGAKAKSLERTSKAQGRVGSSYAVSGGGIGSGSVSSPPSPKASRGPPPMF
IPASANSPSPSRQNGAPSSRQKGGSSAGCGSRHTVMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013246SAGA_su_Sgf11