prot_F-serratus_M_contig111.1044.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig111.1044.1
Unique Name	prot_F-serratus_M_contig111.1044.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	204

Homology

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BLAST of mRNA_F-serratus_M_contig111.1044.1 vs. uniprot
Match: D7FXX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX3_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 3.670e-110
Identity = 169/211 (80.09%), Postives = 183/211 (86.73%), Query Frame = 0

Query:    1 MASAVERVQTRLQEAMDRGNQASLGQAIYASKGINGLKQLRRSAKARLKQLSADQNREMMGSHMPP-------EEPLTWRTTEQGDRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIVVAKALEDVEGAMEAVNSFVKTAPTFIAKVQAGNRGGVTQTVHCPVHLLPSIQRLSRKIQVESGANYVFANSKMSTFCVT 204
            MASAV+RVQ RLQEAMD+GNQASLGQAI ASKG+NGLKQLRRSAKARLKQLSADQNR M+GS M         EEPLTWRT+EQG RYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIV ++A+++VEGAME VN FVKTAPTFIAK Q+ + GGVTQTV CPV+LLPSIQRLSRKIQ ESGAN VFAN K+  F  T
Sbjct:    1 MASAVDRVQMRLQEAMDQGNQASLGQAIDASKGVNGLKQLRRSAKARLKQLSADQNRSMIGSRMQQQQHQQTTEEPLTWRTSEQGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIVESRAIQEVEGAMETVNDFVKTAPTFIAKAQSTSGGGVTQTVQCPVNLLPSIQRLSRKIQAESGANCVFANCKVRPFSTT 211

[Close]

BLAST of mRNA_F-serratus_M_contig111.1044.1 vs. uniprot
Match: A0A6H5KRR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR8_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.690e-67
Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 0

Query:   77 QGDRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIVVAKALEDVEGAMEAVNSFVKTAPTFIAKVQAGNRGGVTQTVHCPVHLLPSIQRLSRKIQVESGANYVFANSKMSTF 201
            +G RYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVI+ ++A++++EGAME VN+FVKTAPTFIAK Q+ + GGVTQTV CPVHLLPSIQRLSRKIQ ESGAN VFAN K+  F
Sbjct:    3 KGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIIESRAIQELEGAMETVNNFVKTAPTFIAKAQSTSGGGVTQTVQCPVHLLPSIQRLSRKIQAESGANCVFANCKVRPF 127

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig111.1044.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig111.1044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FXX3_ECTSI	3.670e-110	80.09	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRR8_9PHAE	2.690e-67	80.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..54
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 80..140 score: 9.687
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10		coord: 82..148 e-value: 1.9E-6 score: 29.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 74..147
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 86..141 e-value: 4.2E-5 score: 23.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig111	contig	F-serratus_M_contig111:617882..622004 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig111.1044.1	mRNA_F-serratus_M_contig111.1044.1	Fucus serratus male	mRNA	F-serratus_M_contig111 617882..631331 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig111.1044.1 ID=prot_F-serratus_M_contig111.1044.1|Name=mRNA_F-serratus_M_contig111.1044.1|organism=Fucus serratus male|type=polypeptide|length=204bp
MASAVERVQTRLQEAMDRGNQASLGQAIYASKGINGLKQLRRSAKARLKQ
LSADQNREMMGSHMPPEEPLTWRTTEQGDRYRAVAHLPTSIIGWVIGHKG
CNARMLKQQTGTELWVDVPGQCVIVVAKALEDVEGAMEAVNSFVKTAPTF
IAKVQAGNRGGVTQTVHCPVHLLPSIQRLSRKIQVESGANYVFANSKMST
FCVT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036612	KH_dom_type_1_sf
IPR004088	KH_dom_type_1