mRNA_F-serratus_M_contig10.95.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A812UGF3_SYMMI (DhkK protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UGF3_SYMMI) HSP 1 Score: 60.1 bits (144), Expect = 1.600e-8 Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 73 DEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSIGTGLGLYSVLQKALRLRGTCGIWDNFDAGS 276 D + L F ++DTGIG++DEL+ +LFK F Q Q M GTGLGL+++ ++ L G CG+ D D S Sbjct: 170 DAPEFLRFEIEDTGIGISDELRLKLFKPFQQTQRMAG-GTGLGLFALSERTKALGGHCGVSDRKDGQS 236
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: L1JXG5_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JXG5_GUITC) HSP 1 Score: 58.9 bits (141), Expect = 4.170e-8 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 85 MLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSIGTGLGLYSVLQKALRLRGTCGIWDNFDAGS 276 M+ F V DTGIGV + LFK F QLQ GTGLGL+SV +KA++L G CG+ N G+ Sbjct: 349 MIRFSVADTGIGVDKDKMDLLFKPFGQLQDFSG-GTGLGLFSVREKAIKLGGACGVTMNEPKGT 411
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A7S0Z3C2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z3C2_9CRYP) HSP 1 Score: 58.2 bits (139), Expect = 7.790e-8 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 100 VKDTGIGVTDELKPRLFKAFTQLQSMQSIGTGLGLYSVLQKALRLRGTCGIWDNFDAGS 276 V DTGIG+ +E + +LF AF+QLQ GTGLGLYSVL+K L G CG+ N GS Sbjct: 354 VADTGIGIQEEQRKKLFAAFSQLQDFAG-GTGLGLYSVLKKINVLGGACGVEANTPKGS 411
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A496RDR2_9SPIR (Hybrid sensor histidine kinase/response regulator n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A496RDR2_9SPIR) HSP 1 Score: 54.3 bits (129), Expect = 1.790e-6 Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 58 VESDDDEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSI---GTGLGLYSVLQKALRLRGTCGI 252 V + D+ L FCV+DTGIG+ D+ K RLFK FTQ+ S + GTGLGL A + GT G+ Sbjct: 289 VAEEGDDDITLKFCVEDTGIGIPDDKKDRLFKVFTQVDSTTTRKYGGTGLGLSISKNLAEMMHGTIGV 356
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: UPI00135C3072 (ATP-binding protein n=1 Tax=Aquitalea denitrificans TaxID=519081 RepID=UPI00135C3072) HSP 1 Score: 53.9 bits (128), Expect = 2.470e-6 Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 49 AGSVESDDDEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSI---GTGLGLYSVLQKALRLRGTCGIWDNFDAGS 276 + ++E DEQ ML CVKD+GIG++D+ + RLF+ F+Q S + GTGLGL + A + G+ G+ + GS Sbjct: 415 SATLEQGRDEQTMLRLCVKDSGIGLSDQARSRLFQPFSQADSSTTRKYGGTGLGLAICKRLAEAMGGSIGVQSTPEVGS 493
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A5J6PA42_9GAMM (Histidine kinase n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=2303332 RepID=A0A5J6PA42_9GAMM) HSP 1 Score: 52.8 bits (125), Expect = 6.300e-6 Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 58 VESDDDEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSI---GTGLGLYSVLQKALRLRG 240 E DD Q L FCV+DTGIG+TDE + RLF++FTQ S + GTGLGL ++ Q+ +++ G Sbjct: 404 AEQGDDVQ--LAFCVRDTGIGITDEQQGRLFQSFTQADSSMARKYGGTGLGL-TISQRLVQMMG 464
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A3G9GHJ6_9NEIS (Histidine kinase n=1 Tax=Aquitalea magnusonii TaxID=332411 RepID=A0A3G9GHJ6_9NEIS) HSP 1 Score: 52.8 bits (125), Expect = 6.300e-6 Identity = 32/79 (40.51%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 49 AGSVESDDDEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSI---GTGLGLYSVLQKALRLRGTCGIWDNFDAGS 276 + ++E D Q ML CVKDTGIG++D+ + RLF+ F+Q S + GTGLGL + A + GT G+ GS Sbjct: 425 SATLEPGRDTQSMLRLCVKDTGIGLSDQARSRLFQPFSQADSSTTRKYGGTGLGLAICKRLAEAMGGTIGVQSTPCVGS 503
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A1R1JT06_ALCXX (Histidine kinase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans TaxID=85698 RepID=A0A1R1JT06_ALCXX) HSP 1 Score: 52.8 bits (125), Expect = 6.340e-6 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 1 Query: 70 DDEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQS--IGTGLGLY 207 DD + ++ +C+ DTGIG++DE K RLF+ F Q+Q QS G GLGLY Sbjct: 623 DDGRTLMTWCISDTGIGISDEQKQRLFQPFYQVQDSQSSIAGAGLGLY 670
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: UPI001667893C (response regulator n=1 Tax=Dyadobacter endophyticus TaxID=1749036 RepID=UPI001667893C) HSP 1 Score: 52.4 bits (124), Expect = 8.740e-6 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 70 DDEQDMLLFCVKDTGIGVTDELKPRLFKAFTQLQSMQSI---GTGLGLYSVLQKALRLRG-TCGIWDNFDAGS 276 DD Q L F V+D+GIG+++ + RLFKAF+Q+ S S GTGLGL ++ QK + L G T G+ N GS Sbjct: 1020 DDNQVGLYFEVRDSGIGISESKRDRLFKAFSQVDSSTSRQYGGTGLGL-AICQKLVNLMGGTIGVTSNAGEGS 1091
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Match: A0A850Q2J1_9BACT (Histidine kinase domain-containing protein n=1 Tax=Candidatus Nomurabacteria bacterium TaxID=2052152 RepID=A0A850Q2J1_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 1.140e-5 Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 82 DMLLFCVKDTGIGVTDELKPRLFKAFTQLQS--MQSIGTGLGLYSVLQ 219 D ++FCVKDTG+G+T+E+K LF+ F++ + M S GTGLGLY Q Sbjct: 450 DKVVFCVKDTGMGMTEEIKESLFQKFSRGEGAKMNSTGTGLGLYLAKQ 497 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.95.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.95.1 >prot_F-serratus_M_contig10.95.1 ID=prot_F-serratus_M_contig10.95.1|Name=mRNA_F-serratus_M_contig10.95.1|organism=Fucus serratus male|type=polypeptide|length=92bp MSPRESSASKPPSPCSAGSVESDDDEQDMLLFCVKDTGIGVTDELKPRLFback to top mRNA from alignment at F-serratus_M_contig10:1228613..1229300- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.95.1 ID=mRNA_F-serratus_M_contig10.95.1|Name=mRNA_F-serratus_M_contig10.95.1|organism=Fucus serratus male|type=mRNA|length=688bp|location=Sequence derived from alignment at F-serratus_M_contig10:1228613..1229300- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:1228613..1229300- >mRNA_F-serratus_M_contig10.95.1 ID=mRNA_F-serratus_M_contig10.95.1|Name=mRNA_F-serratus_M_contig10.95.1|organism=Fucus serratus male|type=CDS|length=552bp|location=Sequence derived from alignment at F-serratus_M_contig10:1228613..1229300- (Fucus serratus male)back to top |